© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0151000.1
GGGTCAAATATCTTTATAGAAAATTACTGCCACCAGAAATAAGTTCATTCTTTTCGTTCCATTCTGTAATCACGTGTTTACAGTTTTAAATATGTATATGCAAATTTGTTGGATTCCTATCAAGGTATTCACAATTTTACATAGGCGATAGGTTGGCAGCAGAAGAGTGAACAGAGCTAAAGGAAGCAGTGATACCGTCGAGCTAACACAGATCGTGTTGGCTACTGAGCTTTGCTGCCTTCGTTTAGTCTTCTAATTGTTCAGAACACATGAATCAATCTACTACTCATCTTGCACGGGATGTCAGCTCACACCTTTTTTTGATGCAAGCTCCTTCTCAACTTCTGAAAATATCTCCCTCAACCTGTTGGCAGAATTCGACATAACATTCTTCACAACCTTCTTCTGCTGCTTAGCTCCCTTCAACCAGGCAATCCCTAACAATACCTGAATGCTGCAGGTGCTTGGTTTTAAGGACGTGCTAGTCATCTGATACTTGAGCTGGATCTGCGGTTTTGGATTACAACTGGTGATCGCACAGGATGAAAGTAAAAGTGAACATTCACATGCATTTCTAATCGAACTCAGTTTTGGCTTTTCTTACACTGGAGTAGTCTTCATGTTGGACTCCTTGGAGGGTCATCACCTCCTCAATGACCCACCCATCTCGATTCGCTAAGTTATATTTTCGTTGAGTGGTTGATGCCTCTCCAAAGCGCGACAAGATTTTGTCAAACTTAAAGCTGATTTGCCTCTGGTATATGTTTTGGTTTAGTAGCTCCCATTCTGTAGGCGAGTAATCGACGCAACCAGCTTTCTGCATCACCTTGTGCTCCAATGGACCTCCGGAGAACATATCCATCAAGGAATTGATATCAACAGAAAGAACCGCCGAGTAGACTTCTGACATTTTCACATCTTCATTGGCTAATAGAGAACCTTCTTCACAAGGGAGCTGTTTCAGTTCAGAATTTTTGTCAATCATCTCTCCCTTCTGTTCTGGATCCACTGACCTCATTTTCCAAAGTGCCATAATAATTCTGTGAGCATCATTGAATGAAACAAATGTCTGGAAATGGTATTTCAGTTTTCCTTGAGGATCCAGTGTTTTGGCTCCATGTCTGGCTTCTAGACCTCTGTCCTTGCGGAGAATGATCATCAAGGATGGACTTCCAACTTTTGCTAGGGTTGGTGGAGCAACCTGGATATCATCAATGTCGTCCCAAAGAAAGAAAAATTTGGTTTTTCGGCCTAATATATTGGAATAGAATCCAAGTATTCTTGAGGAGAGAAAAATGCGCCCCTGAAGTGGCATTTTCCGCTTTAGATAACAAGTGAAATCATCGATAAGAAATTCTTCTGGAGGAAGACTAAAGAGCTTACGGAACGCTGAATTTGTCTGAGCAGACCGCAGGTGTATCTTCTTACCTACTTCTTTCCCCATCTTTGCCAGATAATTCATAACAATTTCAGTCCCACGCGAGTTGTTCAAAAAGATTCGCAAGTGTAACTTAGGCTCACATCCCTGGGGAAACCTTCCATCAAGAGGAAGCCACATGTCACCCAAATCTGACAAATTGTTTTTCAAAAAGTTCACTTCTGTTTGACCAATAGGAATTTTATTATGTGGTCCCTCTGAATCATGCACAACTACTTCCAACCTTGATGGAGGATCATCCATTGCATTGAATTCAAATATCTCGTTCCATTTCGGTTCGGATGTCTGGAATTTAACTGAGCTTGTTTTCCTCTTTCCATTACAGGTAAAAACAACATAAGGATCAGGCAAGCCAGGTGTACCTGAACCTACTACACCGCTTCCCTCAATAAGTGCAACAGTCAGCAACCAACCATCACCATGAGCTTTCACCCCATGATCACTACCTCTTTGTTTCCATGCATACAAAAACCGCCGTCCTGATTTGAAGATATTCTGCCCCTGAATTATCAAAATGGCACAAAATACAACCTCCCAAATTGAATCTGGGAGATCAATACCAAAATATTCGAGCCCATGCACCATATTTGGCTTAACTAGACGAAGATGTGCAGTGGCATACAGTGCTATACAGAGAGAGAATATGAATGCAAAGTTTCCAAGGAAGCGGGCAGCCAGTTTCCAAATTGATTCTTCCTGTGTCTGCAATGAGCTTAAAATCTCGTCTTTGCTTAAGTTAGAATCATCAGGCGCAATCACTTTGGTCTTCTGGGACAGTACTTCAGTAAACTGTGCATATCCCTCTCGGAGTCCTTGTTTTGTCCCGCTCTCGATCATCCCTTTCAACATTGTACTCTGGACAAAGTTCAGACGCCAACTTATAGTAAGATGTGATGTTTGTTCTTTAGATGGCAACTGTGGACCTGGTGTTATACAGTACAGAATCTCCACCTTGAAACAATTACCACAGGGAACCTCAGGACTGCTAACACTGGAAAGAACAGCAAAAGAATTTCCAGCTGCCTTTAAGTATGTCTGCTCTTCAGTAATTTTTACAGCTTTAACTAATTTGCTTGCAGCTTTTGTATAACTTAAAGTTCTTTTCAAACAATCATTGCTTACAAGTTTCCAGGGGTCAGTTTGGAATCCGCTTAACCCTTGAACTTCTGCAACTGCTGGCCAGAAATCTGAATGTGCAGAAAACAACATGGAATTCATTTCAGTTGGTTGAAGAACATAAGATTGGTCCACGAGTATACCACCACGCAAGTTTTCTGGCATTTCAGAACCTTTATCTTTAGACTCCAGGGATTTCATTAGCTCATTTAAACTAGTTTCAGGGAGCGCCCCATTATCACCATTTTCACAAGATTCAGAGTTCATTTGTGTATCTTGAAACTGCTCATGATCTGATGTGGCAGAAGGTGCGGCGTCAACAGGTTTCCGACAAAAGTAGCGAGACATGACTTCCACTACTGATGATGCATTGGTGGTGGCATCATTGTCATCTTCCTCGGGCTCCAAAAGAATAGATCTTTCTGTGCTGATACAAGACAGTTGCCCTGGGCTTCGACGGCCTTGCTGATCCATGATGCCCTGGCTCAACTTATCCATACTGCTGCAGGATGCCCTTTCCATGCTAGGACAGGCTGACAGATCAAGGCTACTAACAGAAGCCGATAAGGACGAGGCAGTGGTTCCAACTGACCTCGCTGATAAGGACGAGGCAGTGGTTCCTACTGACCTCGCTGATAAGGACGAGGCAGTGGTTCCAACTGACCTCATTGAGCTGCATGGTGTATCATTGATAAGTTGCATTGGCATGTTTCTCGGTTCGTCGCAAATGGCTGTCCTAGATAAGTAAATCCTCAAGCGAATTTCACCCGCAACGCGCCGTTTCTTCCTGAACCTGCCGCCCTTGGAGTGGAGGTGGTACCACGCCGTGCCGAGGGAGAGGCCGTCCGCCGCCATGACGGTCGAGAGGGGCACCTTGACCCGCCCCAGGAACCCCCCGCCGAAGTACCCCTCCTCGTTGAGCACGGACACGACGAGCTCCTCCTCGGCGTCGCCGACGGCGAACCCGAACTCCTCGTCCCACAGGGGGCTGAGGCACCTCTTCACCACCGTCGTCTTCGCCCTCCGCCTCCCCATCTGCAGCCGCACGTAGGGGTCGCTGTGCCCGGTGAGGTACGCCGCCTGGAGCCCCCGCGCCTCCAGCACGTGCACGCACAGCCGCATCGGCGCGCTCCCCGGCCGCTCCCCGCCACCGCCGCTGCCGCCGCCCACCGATCTCGCCATTCGAGGAGGAGGAGGAGGAGGCGGCAATGGCGATGGCGATCTCTGGTTTTTCTCCGGGGAATTGGGGATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0151000.1 | 2 | 5589369 | G | T |
| Osa02LNT0151000.1 | 2 | 5587375 | C | G |
| Osa02LNT0151000.1 | 2 | 5587418 | T | G |
| Osa02LNT0151000.1 | 2 | 5587821 | T | C |
| Osa02LNT0151000.1 | 2 | 5587928 | T | C |
| Osa02LNT0151000.1 | 2 | 5588538 | A | G |
| Osa02LNT0151000.1 | 2 | 5590014 | A | G |
| Osa02LNT0151000.1 | 2 | 5590424 | G | A |
| Osa02LNT0151000.1 | 2 | 5590871 | C | T |
| Osa02LNT0151000.1 | 2 | 5590932 | A | T |
| Osa02LNT0151000.1 | 2 | 5592562 | G | A |
| Osa02LNT0151000.1 | 2 | 5592920 | G | A |
| Osa02LNT0151000.1 | 2 | 5588890 | A | G |
| Osa02LNT0151000.1 | 2 | 5592976 | C | T |
| Osa02LNT0151000.1 | 2 | 5593147 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0151000.1 | osa-miR5532 | Translation | 4.5 | 10.895 | 1 | 22 |
| Osa02LNT0151000.1 | osa-miR1437b-5p | Translation | 4.5 | 19.384 | 1 | 21 |
| Osa02LNT0151000.1 | osa-miR159f | Cleavage | 4.5 | 12.837 | 1 | 21 |
| Osa02LNT0151000.1 | osa-miR172a | Translation | 5.0 | 18.802 | 1 | 21 |
| Osa02LNT0151000.1 | osa-miR172b | Translation | 4.0 | 18.802 | 1 | 21 |
| Osa02LNT0151000.1 | osa-miR172c | Translation | 5.0 | 18.802 | 1 | 21 |
| Osa02LNT0151000.1 | osa-miR172d-3p | Translation | 5.0 | 18.802 | 1 | 21 |
| Osa02LNT0151000.1 | osa-miR426 | Cleavage | 5.0 | 24.555 | 1 | 21 |
| Osa02LNT0151000.1 | osa-miR816 | Cleavage | 5.0 | 15.198 | 1 | 20 |
| Osa02LNT0151000.1 | osa-miR1436 | Cleavage | 5.0 | 11.562 | 1 | 21 |
| Osa02LNT0151000.1 | osa-miR1852 | Cleavage | 4.5 | 20.175 | 1 | 21 |
| Osa02LNT0151000.1 | osa-miR1854-3p | Cleavage | 5.0 | 22.778 | 1 | 22 |
| Osa02LNT0151000.1 | osa-miR1857-5p | Cleavage | 5.0 | 18.182 | 1 | 21 |
| Osa02LNT0151000.1 | osa-miR2055 | Translation | 3.5 | 17.128 | 1 | 21 |
| Osa02LNT0151000.1 | osa-miR2876-3p | Cleavage | 5.0 | 22.841 | 1 | 21 |
| Osa02LNT0151000.1 | osa-miR2878-5p | Cleavage | 3.5 | 20.085 | 1 | 24 |
| Osa02LNT0151000.1 | osa-miR2922 | Cleavage | 5.0 | 10.346 | 1 | 20 |
| Osa02LNT0151000.1 | osa-miR2931 | Cleavage | 5.0 | 12.444 | 1 | 20 |
| Osa02LNT0151000.1 | osa-miR5488 | Translation | 5.0 | 17.014 | 1 | 21 |
| Osa02LNT0151000.1 | osa-miR5499 | Cleavage | 5.0 | 24.113 | 1 | 21 |
| Osa02LNT0151000.1 | osa-miR5519 | Translation | 4.0 | 15.348 | 1 | 21 |
| Osa02LNT0151000.1 | osa-miR5488 | Translation | 4.5 | 21.21 | 1 | 21 |
| Osa02LNT0151000.1 | osa-miR2091-5p | Cleavage | 5.0 | 16.303 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0151000.1 | 2 | nan | Resistance or Tolerance | Drought tolerance | RG83 | RG171 |
| Osa02LNT0151000.1 | 2 | qPH-2 | Morphological trait | Dwarf | RG324 | RG83 |
| Osa02LNT0151000.1 | 2 | qLER-2 | Morphological trait | Culm/leaf | R2344 | R712 |
| Osa02LNT0151000.1 | 2 | qEML-2 | Morphological trait | Seed | R2344 | R712 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)