>Osa02LNT0151400.1

GGGGCAAATCAAGATGAGCACCGTACTCATACACCTTCACTGTCATAAGTTGGCATCAAAACTTAACCAATCAAGTAAAAGCACACCAAATAAGCTGTGCCACTAATTGATTACACAAGCCCTTGATGTATCAAGGAGTTCCAAATACAACACCTAGCAGCAGAATACTAAAATTAAAGCTACAACAGGAAGCTTTTTGGCTTCTAATATTAGCTTTGCTCCTCGGCCTCAGCCTCCGCTGCCGCGGCCTCCCTCTCTTCCGCGGCTGCTGCCATCAGTTCGTCAAATTTGTCCGTCTTGCCCAGCACTATTTCAATCTTGGCTTTCTGCATAGGGCGACTCCTCGAATCATCTTTGACGTCAACAGTAGATGTCATAATCTTCTTCTCGACAGCAAGGCCATTATTTTTCAGAATTTCAGCAACAGTCACCACAGTTGCAATAGCCATGCCGAGTGCCGAGAGCTCCACTTCGTTATGCAGCTGCATGTACCTCTTGGCGAGGTTGACGTAGAAGAAGAGCGGCTTCTTGGTGTTGGAGACCTGGATGCGGTTCTTCTTGTGCGCCTCCGCCGCGCCGCCGCCCGCCCCGGCGGCTTCTCCCGCGGCTATGGTGAGGTTGCCGACCGCCTCCGTCACCTCCTCCATGGCCGCCGCCCGACGAGTCCCCGCGGAGCACCGTGCGCGAGTGAAACGGAGAGCGCGAGGCGGCGAAGAAGATGTGGAGGATTTCGGCGGCGACGGAGGTAAGAGGGAGGGGGGAGAGC

Explanation	CPC Score
noncoding (weak)	-0.642454

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0151400.1	2	5740497	G	A
Osa02LNT0151400.1	2	5742354	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0151400.1	osa-miR5795	Translation	5.0	23.424	1	22
Osa02LNT0151400.1	osa-miR1861n	Cleavage	5.0	20.785	1	22
Osa02LNT0151400.1	osa-miR2931	Cleavage	2.5	16.523	1	20
Osa02LNT0151400.1	osa-miR5487	Cleavage	5.0	22.777	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0151400.1	2	qEML-2	Morphological trait	Seed	R2344	R712
Osa02LNT0151400.1	2	nan	Resistance or Tolerance	Drought tolerance	RG83	RG171
Osa02LNT0151400.1	2	qLER-2	Morphological trait	Culm/leaf	R2344	R712
Osa02LNT0151400.1	2	qPH-2	Morphological trait	Dwarf	RG324	RG83

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus