>Osa02LNT0151500.1

AAAAACAAAGTAACGAACTCTATAAGGACTGGTACGATAAAAATCCTTTGTAGAGAAAGGGGATCAACTCAAGTCTACCTTTTCAAGGAGTTGGGCCAGATATCAAAATTTACATAGTGCTTGGATTCAATTACATGATTACAGTTGAGAATCTGACGTTCTACCTGTATAGTGTGTATGACAAACGCATGTCAACATAGAGCAATGCCGAAGTGAAGCAAATCATTTCGAAGGTGGTCATTGCTGGATTTGCTTTGGTTGTTCTTGCTGCTTTTCATAATCCCCAAGCCTCTTCAGCCATCGCAAACCGAGATCACATCCAGCTTCAGCTGCAATTTGAAACTGCTCCTTTGCTAGCTTCACTGGATCCTGCTGTATGGGCCTTTTTCGCATCTTTCCAGTTGATGGACTCTTACCTGAGTTGAACCTGGTAATAACCTCAGGCACTTCAGCACCTTTTAATAGAAGTGATCCATATGCAATTGCAGCTCCAGAGTGTCCCTTTTCTGATGCTCTGTGGAAACACCACATTGCTGAAGCTATATCCCTCTTAACACAGTCTCCAGTTAAATATACAGCACCTAGAAGATACAAAGCACCAGGGTGCAACTGGTCAACAGCTTTCTCAATGTAATAAAAAGCCTGTTGGTCAGAGTGAACGTAGTCATTCTCAATTCTCAAATGGCATCCAAGTTCATACTGTGCATCTGGATCACCCATGTTTGCAGCTTCAACCAACAGAGCAGCACCAATTGCCAGAAGTGAAAGTTAACCCACATGGCCTTACAAGCTCCAGGAACATGATACTTGAAATGCATCTTGGCAAGCCATAATCTCGCATGAGTGTTCATATTGTCGATCTCCAGAGCCAGCTCAAAATTTTCCTTTGCACCCCTGAGAAGTGGGATCAGGCGCTTGTCGTTGCGGTCGGCGTAGTCGATGACGCGATCAACCTCCTGCAGGGCGCTCCACCCCTTGGCCACCAACTCCATCGCCTTCTTGTTCCGGTCATGGATCCACCTCTGCGGATTCAGCGCGTGGGCGAGCTGGTTGGCGAGCCTGGAATGGGAGGACGACGCGGCGGCGGCGGCCGCCACCCGCCGAGCCGACGCCGCGAGCATCGCGGGCGGTGCCCCTCCCCTTCCTCCGCAAACCCCGGCTGAGCTGCGCCGCCGCTAGGGTTTGTGCTTCGGTTCTCTTCCCC

Explanation	CPC Score
noncoding (weak)	-0.829519

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0151500.1	2	5745858	G	A
Osa02LNT0151500.1	2	5747430	G	A
Osa02LNT0151500.1	2	5747822	G	A
Osa02LNT0151500.1	2	5748023	A	G
Osa02LNT0151500.1	2	5746903	G	A
Osa02LNT0151500.1	2	5746325	A	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0151500.1	osa-miR5829	Translation	4.5	21.247	1	24
Osa02LNT0151500.1	osa-miR167d-5p	Translation	4.5	17.57	1	21
Osa02LNT0151500.1	osa-miR167e-5p	Translation	4.5	17.57	1	21
Osa02LNT0151500.1	osa-miR167f	Translation	4.5	17.57	1	21
Osa02LNT0151500.1	osa-miR167g	Translation	4.5	17.57	1	21
Osa02LNT0151500.1	osa-miR167h-5p	Translation	4.5	17.57	1	21
Osa02LNT0151500.1	osa-miR167i-5p	Translation	4.5	17.57	1	21
Osa02LNT0151500.1	osa-miR167j	Translation	4.5	17.57	1	21
Osa02LNT0151500.1	osa-miR1853-3p	Translation	4.0	14.875	1	22
Osa02LNT0151500.1	osa-miR2055	Cleavage	4.5	17.162	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0151500.1	2	nan	Resistance or Tolerance	Drought tolerance	RG83	RG171
Osa02LNT0151500.1	2	qLER-2	Morphological trait	Culm/leaf	R2344	R712
Osa02LNT0151500.1	2	qPH-2	Morphological trait	Dwarf	RG324	RG83
Osa02LNT0151500.1	2	qEML-2	Morphological trait	Seed	R2344	R712

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus