© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0012300.1
GGACATATGTAACAGACAGCAAGTTACAATCAAACTCGAGTCCAAACTTGGTAAAATCTGGATCTACATACTCCATGTTAGCACAGAAAACTGAGAATGCCATTTTGGACGCTACAAAAAGCAAAAGCTCAAGAGTGAGAATGTTCCCGCGATTTCTTCAGAACTTCCTGCAACACGGCCGCGATCCTACCAGCCATGTGGTGCTCCATGAACATTTCCTTCACCCTGCCATAGCCTTTCCTACCCATGGAGACCCTGTCCTCTTCGTGGCTCGCGAGCCTTACCATGTTCTTCGCGAGGGGCGCGACGCCTTCCTTCCCGGCGGGGTGCAGGAGGCCGGTTGAGCCGTCCACGACGATCTCCGTGGTCCCTCCGGCCGCCGTGCCCTGATAGTATAGATAGATATAGGAGGGTGCAGTGTGACATTAAACCCAAGTCAATGAAATTGTGGGGCTGTTTGGTTCCCAGCCACACTTTACCATTACTTGCCAACAAAAGTTGCCACACCTTGCCTAAGGTGAGGTGATCAAATTGTTAGCCACAACTTACTAAGCCTAAAGGAATCTTGCCACACTTTTTTGAGCCATTGACACGTGGGACCCAATTTGTTGGAGGGGAATCTTGCCACAACTGTGGCTACAACCAAACACCTGTCAAATTTGCCTAACCTTAGGCGTGGCAAACTGTGGCAAAGTGTAGCTTGCAACCAAACACACCCTGTCATATGGAAGCATGAGGCAGGAGATGCCGGCTGAAACAGAGGATGGCAGGCTCAAGAGCCGAGGGTTTGTAGGGACAGTCAGACAGTCCACAGTTGAGTCCAAGGCTCATGATTGTCAATAATAACTCTGTATTCAGAGGCATACTGGCCCACATTCCAGGGCTCCTTTGGAACGTGGGAATCCTTTTTTTTTTTTGACTCCCATGGGAAATGAACTTCTCCCTCAGTTCCCTCCATTCCAAATATAAGTATTTCTGAAAATGTATAGAGCCCCAGACCCAGAAATGCTTATATTGTGATACAAACTTTGAATCCTAGAAATACTTATATTTTTATATTTTAGAGTGGAGGGAGTATTTATAAAATTCCTTTGTTCCAAACTATATTATGGTAAGGGCGTAAGGCTTTCTAGCTGGCAGATTGATGGTTAATAGAAGTAGAAAATTATACTCCCTCCATCGATAAATACGTACGTGTTACCTTGAGATCTATGCAGTTAATCATTCATGACCACTGAACTGTGAGGTTATAGAAATGGATCATGTGAAATTAGTGTCATTGGATTTGCATTCCCCAGTAAAATTATGATATATTTTTGTTTCTAATATACTTTGATAAAAAAAAGAATTGTACTCAACTCTTGCATCGAGACTAGTGAGTCAAAAACTATTTGTGTTTGTGGATCAATGGGGTATAACTAGGAGCACTTCAAGAGAGGGAGGGAGGGAGTTTTACCAACACTGGCAACTTGAATGCCATTGCTTCAATCGTTATCCTTCCAAAGCATTCTCCACGGGCCTGAGAGTTCTGAACAAGCACATCAGTTGCAGCCAAATAAGGAGCCACTGCTAATGTCTTGTTTACAAAGTGAACCCGGTCCTGAATCCCATTCTTCACCGCAAAATCACGTAATTGTGTCTCAAACTTGGTCTGAGCATTTATGTCACTTCCCACAACTACAGCATGCATTGTGGGCACTTTTAACTTCTTCTGTTCGATGAGCTGGACACCCTGATAAAACGCTTGAAGAAATAAGTCCTGCCCTTTTCCACGTGAAACACTGTTTATTATTGCAAACACAAGATCTTCACTCCGTACTCCAAGGAACTCACGGATATGCTCCCGTAGGACTCTTCTTGCAACATTATCTTCAGCAACTTCCATTAACTCCTTACTATTCCCGAGGTGAACAACATAAGTTTGTGGCATCTGTATTTTCAAACGGTCATGAGTCCTGGTCTTCCAATATTCAGCCGTTGTATGAGAATCAATCATGGCTCCAGCAACCAGAGGAAGATGTTTGACATATTCAAGCTTAAAGTAATGCCCTCGCATTTCATGGATCCACCACAAAATCTTGGGAAGAACTTGGGGAACATGGTCATTTAGGACAGCATCAAGCCACTTGCCAGCAACAGCAGTGTTCAAGATAACAAGATCAGCCTTTAGGGCAGTATCAATCGCCTCATGTCCCCTAGCAGGTAATACCTGCACTCCATGGCTCAACATCTTATGCTCCAAGCTATATGTAACATCATTTGTTTCTTCCGATCTCTGGTTTGTTATCCACACCACTTGCGAACCAACCGGAGAGGGAGAGCTCGTGGGAGACGAGCAGCATGAGCTTGGACCTCATGAACTCGAGGGGGTTCCCTGCGACGGCGCCGGTGCGGGTGGTCGCGACGGCCGCCGCCGACGAGCCCGAGCCCCTGCGCGCGTCGACGTCACAGGGGTCCAGCATGGCGCCGCAGAGGAGGAAGCCCGCGGTGGATGCGCAGGCGGCGACGGCGAGGAGGAGCAGGAGGAGGAGGCGGGTCCTGTGGTGGTGGGCCGGGCCTCGGCCGCCGCCCGACGCCGCCGCCGCCGACGAGGGCTTCGCCATCGCAGACCGGTGCGGGGCGGGGTTGTATGGATCGAACGGACGGCCTTGGGGTTTGCTTTGAGATTCGTGCTCCGGCGACCTTAGCTCTTCTCTTCCAACTCCGGCGACCCTGACGAAAGCAATGGAATTAGGGTTTAGGGTCCTGGGTTGGGGGGAGGCGGCGGCCCGGCGGCTGGCGGTGGACACGGGCGGGCGGCGAGGCGGCGGCGGCGGCGCCAAAGCCGCGGCCCACGGGGATGGAGGAGGGCTGTGGGCCGGCGTCAGCGGGGGCGGCGGGGGCAAACGGCTAGGAGACGGCGATTAGTGGTTAGGAGGCGGTGGCTAGTGGTGACGGATACGGCGGCGGGAAGCCGTCGGAGACGGGGAAGATGGCGGGGCGGGGGCACTCGCGCCGTCCATTGGGGAAGAGAGGGGGGTAGGGGGTAGGGGAGGAGGCCGGCCGGGGGAGGGGAGAGGGGGGCTCGCCGGCGCCGTTGACCCCTTCCGGCCAGCCGGCGAGTCCGGGAGACGGCGCGTGGGGCGGCGGCGGAGGCAGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0012300.1 | 1 | 8887013 | T | C |
| Osa01LNT0012300.1 | 1 | 8889439 | T | C |
| Osa01LNT0012300.1 | 1 | 8889930 | G | A |
| Osa01LNT0012300.1 | 1 | 8890966 | A | T |
| Osa01LNT0012300.1 | 1 | 8891462 | T | C |
| Osa01LNT0012300.1 | 1 | 8891736 | A | T |
| Osa01LNT0012300.1 | 1 | 8891881 | G | A |
| Osa01LNT0012300.1 | 1 | 8892037 | A | G |
| Osa01LNT0012300.1 | 1 | 8891929 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0012300.1 | osa-miR5833 | Cleavage | 4.5 | 24.079 | 1 | 21 |
| Osa01LNT0012300.1 | osa-miR6248 | Cleavage | 4.0 | 14.587 | 1 | 21 |
| Osa01LNT0012300.1 | osa-miR6248 | Cleavage | 5.0 | 19.351 | 1 | 21 |
| Osa01LNT0012300.1 | osa-miR159a.1 | Translation | 4.0 | 21.35 | 1 | 21 |
| Osa01LNT0012300.1 | osa-miR159b | Translation | 4.0 | 21.35 | 1 | 21 |
| Osa01LNT0012300.1 | osa-miR444a-3p.2 | Cleavage | 5.0 | 21.531 | 1 | 21 |
| Osa01LNT0012300.1 | osa-miR444d.2 | Cleavage | 5.0 | 21.531 | 1 | 21 |
| Osa01LNT0012300.1 | osa-miR444e | Cleavage | 5.0 | 21.531 | 1 | 21 |
| Osa01LNT0012300.1 | osa-miR1439 | Translation | 5.0 | 21.111 | 1 | 21 |
| Osa01LNT0012300.1 | osa-miR1851 | Cleavage | 3.5 | 17.069 | 1 | 21 |
| Osa01LNT0012300.1 | osa-miR1861d | Translation | 4.5 | 15.165 | 1 | 22 |
| Osa01LNT0012300.1 | osa-miR1320-5p | Cleavage | 1.0 | 21.574 | 1 | 21 |
| Osa01LNT0012300.1 | osa-miR1320-3p | Translation | 4.5 | 20.508 | 1 | 21 |
| Osa01LNT0012300.1 | osa-miR2873a | Cleavage | 2.5 | 15.07 | 1 | 24 |
| Osa01LNT0012300.1 | osa-miR2875 | Translation | 5.0 | 16.059 | 1 | 24 |
| Osa01LNT0012300.1 | osa-miR2875 | Translation | 5.0 | 8.826 | 1 | 24 |
| Osa01LNT0012300.1 | osa-miR2920 | Cleavage | 4.5 | 11.827 | 1 | 23 |
| Osa01LNT0012300.1 | osa-miR2923 | Cleavage | 4.5 | 11.827 | 1 | 22 |
| Osa01LNT0012300.1 | osa-miR3979-5p | Translation | 3.0 | 18.323 | 1 | 20 |
| Osa01LNT0012300.1 | osa-miR3979-5p | Translation | 4.5 | 21.93 | 1 | 20 |
| Osa01LNT0012300.1 | osa-miR5157a-3p | Cleavage | 4.5 | 19.701 | 1 | 24 |
| Osa01LNT0012300.1 | osa-miR5157b-3p | Cleavage | 4.5 | 19.701 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0012300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0012300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0012300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0012300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0012300.1 | 1 | An9 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0012300.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0012300.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0012300.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM576 | RM3412 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)