>Osa02LNT0153400.2

GGAATGAAGGTCAGACTTTGTTAAAAAAAAATGAAGGTCAGACGTCCCAGGTTTTGATTAAAAGCTTCCAAAATTTTAAGTTCTACAAAGAAGACGACATTTTGTTGATCACATTTGCAGGTATTTCTGGACATCATATGCTCTATTTTCTAATTTGTTAGGAAAAAAAGGTTTCATCTTTAGACCTCTGGCAGTATGATAACTTTGATATGGACTTGTATTTGCTTTGGCACTGAACTGAGTATTTCTTTGTTTCCCAAACAGATATATGTGTTACCTAAAAGAATTAATTGCTTAGTTCACTCCTTTAGCTCATGTTTGACTTGTTCATGCAGAAATAGCTCATAGTTTCCATACATGTCAGGACCATCTATTTCTGCTTCATTCTAGGATCTCCTTTGCTGTAACGGAGAGTAGACGGGTGCCTTTGGATTCTCAAAGGATACTTTGTTTGAGACAACAATCAGTTTTGGATGCTAAAAGTGTGAAAAATTGTCAGGAAAAGCCACTTTCAAAAATTGTGAAAAATGTGAGATAATATACTGAAATCCTACAGCAGAAATACCTCCTAAAAAGAGTGCAAATATGAACTATTCTCTCTTGTTCAGTAATTGCAGCATCAAGGAGCCCTTGCCCCTTGCCACTTCTTTTATAGGCATCATTTGAAACTTGCAACCTGGAACTTCACAGGTGTTGTACACAGACAGGGTGGGAGGTCTCCATAATATTCAGGCTGGCATATTTCAGAGCTAGAAATGTTCAGGTACTACCATCTACTTGTTCCATACGTAGTCCTAGCTAGTATGCAATTATAGGTGAGATGTATCATGTATGTAAATTAGCACAAGCTTGCAGCTGACCAAAATCCTAAAGCTAATCGTCATCGAGGGTTTCAGATGGAAGAACTCAACCACCACCCAATCAGTACTGGACCCTTCAAGCCAAGAAACATTAGTGAACACCAACGCTAGCTGAATCAACAACAGCAACCCTCTCGATGGCAATCCTCAACAGCACATGCTCACTGTCGTCGCAGCTGACGACGACGATGTATGCAAGAACCACCCACCGGACGGCCGCCATGATCAAGAACCTCATTAATTTGCTACAATTCACCCTGCAAAACCAAAAGCTACCAAAGAAGAAAAAGTTGTGGAGTTGCGGTGCGATTGCGAAAAGGTGGAGTTGACGGCGAGGACACCTGGGGCGGAGAGGACATCTGGGCGGCAGATCGTGGCACAGCAAACTGGAGGTGGCGGCGGTTCGGTTCCTACCTCTTTCGACTGGATTGGAGGAGAGACCTTCGTGGATCAGATAAATTAGGGCTGAGGGGGAGAGATAAAGGTGCTGACTGCTGAGGGGTAGGGAGGCGTGAAGCTCAGCGGACGGAATGGGGCGCGTGCGGCAGATGAAGCGTGGAGGATGGATGCGGCTGCGCGGTGCGAGCGGGCATTGGAGAGGCGAGCAATGGGGAGAAGAGGAAGGAGAGCGTGTAGGAGGCGGTGCGCGGGCGGAGAAGGGCGGCGTGCGATGGAGCTTGAGCGAGGGTAGCGAGGTGATGGATGCGCGATGCGTGCGGTGCGGGGATCCGGCGCGATGCGACTCCGGATCGGTGGTGGCGCGGTCGTGGGTGTTTCGGCGGCGCGCGCGGTGTTGTCGGAGGAGACCGGCGAGGCGGGGACCAAGCGACTCCGTATTGGTGGCGAACCGGAGATTGGAGGCGCGGCGGTGTTGCCGGCGGTGGAGGCGCGGCGAAGAGGAGGGAGGTGCGGCGAAGAGGAGGACTGCGCGGCGATGGGGGCGCCGGCTGTGGAGGCGCGGCGGAGGAAGAGGTGGGAGGCGTC

Explanation	CPC Score
noncoding	-1.11053

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0153400.2	osa-miR166l-5p	Cleavage	4.5	16.041	1	21
Osa02LNT0153400.2	osa-miR444a-3p.1	Translation	4.0	22.071	1	21
Osa02LNT0153400.2	osa-miR528-3p	Cleavage	5.0	15.0	1	21
Osa02LNT0153400.2	osa-miR529a	Cleavage	5.0	19.856	1	20
Osa02LNT0153400.2	osa-miR530-3p	Cleavage	5.0	17.424	1	21
Osa02LNT0153400.2	osa-miR1426	Cleavage	3.5	14.812	1	21
Osa02LNT0153400.2	osa-miR1432-3p	Translation	5.0	19.474	1	21
Osa02LNT0153400.2	osa-miR1432-3p	Translation	5.0	16.842	1	21
Osa02LNT0153400.2	osa-miR444d.1	Translation	4.0	22.071	1	21
Osa02LNT0153400.2	osa-miR1846d-5p	Translation	3.5	17.836	1	22
Osa02LNT0153400.2	osa-miR2866	Cleavage	5.0	24.719	1	20
Osa02LNT0153400.2	osa-miR5081	Cleavage	3.5	12.11	1	22
Osa02LNT0153400.2	osa-miR5339	Translation	5.0	20.743	1	21
Osa02LNT0153400.2	osa-miR5505	Cleavage	4.5	7.317	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0153400.2	2	nan	Resistance or Tolerance	Drought tolerance	RG83	RG171
Osa02LNT0153400.2	2	qEML-2	Morphological trait	Seed	R2344	R712
Osa02LNT0153400.2	2	qLER-2	Morphological trait	Culm/leaf	R2344	R712
Osa02LNT0153400.2	2	qPH-2	Morphological trait	Dwarf	RG324	RG83
Osa02LNT0153400.2	2	tms5	Physiological trait	Sterility	nan	nan

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore
Osa02LNT0153400.2	osa-MIR2928	100.0	191	10	200	6.52e-98	353

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus