© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0012900.1
GCTTCATAAACATTGCAGATCCTTTTATTCCCAAATATAACATCAATTACAATCGTTCGCGGTACGCGTCGAACAACAACAATTTCTCCGCTGAACTCTCAAGCATACAAGAGCAAGCAGATCGCCAGACACTCTGACAGAGAGAGATGCTACGCCAAGAGAGTCCCGGCCATCACAGTGACAGCTTCTCCCTGGATCCGGACTCTCCTGTTCTCGCCGTCCAGCTCCAAGTACAATGTTCCACTCCTTGGCGAAGCCTGAAACGCCGTAAGTTTTTGTTTCCCCAGCTTTCCACCCCAGTAAGGTGCCAGAACACAATGTGCGCTTCCACACACAGGATCCTGTAAGAGTATATCCGAGTTGTTAGTGTTTTAAAAGCCTGTGCTAAAAAATATACTACGAGAAGTTTCAAATTTTGGTCGATAAGGGGCATAGAGATTAACTTGCCAAGTTATACCAAAAGTTTCTGAACACTCAAGGAACGATACAGCCATACAGGGAATCGTCATAAAACTATCAAATGCATGATAACAAGTTTATGGAACTGTCACAAGAAATCATGACCAAAATAAATTTCAGTACTCAGTCAAATTCACACTTTGGTCACTTCACAAGTCTATCTAAAATGATGTTTTTTTAATTACTAGTTGTCGATAACCCCTTGACTCACCTTGAGGTATTAAGAGGTTCTGATTCTTTGGAGAGATTATATCAGTCATCTCTGCATCAATGCCAATGTTTTTCACCTAGTGTGGTAGGAACTAGGAAGATTAAAACTACGCATAAACCAGAACTGTAGAGACTTCAAATAAAAAACACCATATTATATAGAGTTAAGTATTGTTTTCTTTTATGAAAGGAGTTAAGTATTGTAGTAATCATGCAAGGTGTAATCAATTTATGTCTCTGATTGATGAAAAATAGCTTGTGATGATTTAACAATTTTGAATTTAGACAAGCAACATTGGTAACATCGTGACAGCAGAGAATCCTTCTGTACCCATGCAATGACTAAAAAGTGTACCACATATGAGATTATATCTACATATTCTGGAACTAAAATGGCCATTTTTAACTTAACAAGCCACATTGTCTGCATAAAAAACTTGGTTGTTGGGTGGAAAGAATCGGCATACCTCATCTATCCCAAATTTTGGGCAGAAGAATCGTGAAAAGAAGTCATAATCAGATCCAGCAGGTGCTGGTCCCGTAACAATAACTCCTCTACCATCACATTTTTTAATTTCATTAATGTTAGGGATAATATCAGCAACCTCTTTTCCGGAAGAAAGTTCCACCTGAAAGCCATGCCAGAATCATTTAGTACTAACAAACAAATGAACAATTCCAACTCCTTCCTCTCCATCTTCTTTTTTTAATAAAAAAAATCCATTATAAATTTTCCATCTTTTCAGAAAAGCTTACCAACTCCTCATTTAATATTAGCATCCTTAAAAGATTAGCAATTCTTTCTCTTAGGGAAATAATCGTAGCGGTAGCATTGCCATGGTTCATGACCTCCATTTTAATCTTTGAACAGACATTTTTTAATCATTGACAATGTTGACTCGCCTAATTAAATTTGGACAAATAATAATTTCAAAGCTATTCTACTTTGTAGGCTAAAAATAAAATTGTAAGATTCATTCCATATTACTATTTTCATAACAGTGCAGAGTTCAGAGTATTTACAAATTTATTACCAAAAAGTAGTGGTCAAAGTGTGTATAATTCAATTGATGTTGCCAATCATTTTAACCAAAAAAAAAAGACATGGTAATATCCAAATGTACTAGTTATGAAGGCAACATTCAGAGCAGCATATATCAAATTTTGCCAAATTTTGCCGGATGTTGTAACTTGTATTAAGGGGATATAAGAGGAAGTACGATGAGGTCACCGGCGGTTGATGATTTCCAAACACTGACGACTCGGGCGCCATTCAGAGTCTCCGGAATCGACAGCGTCTCCGCGGAATCGTACTCCACGAGATCGATCATGGGGAAATCCAGCTCGATGAACAGCTTCTCCTCACCCGGGACGCCGCCATCGTTCGCCGGAGGCGGCGGAGCAGGAACCTTCTTGGCGGTCAGGATGCCGGACCTCGTCACGAACTCGACCATGGCGGCGGCGGCGTGCTGCTGCTTCGCGAGGACGGTGGTGAAGAGGAAGTGGGCGGATGCCAGCGTCGCGTGGCCGCAGAGATTCACCTCGGCGACGGGGGTGAACCAGCGGAGGCGGAACCGCGGGGCGGCGTCGGCGGCGGCGGCGGAGGAGGAGGGGTCGCGGATGAGGAAGGCGGTCTCGGAGAGGTTGAACTCGGCTGCGACGGACTGCATCCACCGCTCGTCCGCCGCCGCCGCGGCATCCTCCCCTTCCAGGAGGCATACGGCGGCGGGGTTGCCCTTGAACGGCTCGGCCGCGAACGCGTCCACCACGGCGTACTGGATGGCGTTCTTGACCATTTCCGGCGAGGCGGCGGCGACGACGACGACTGCGGCGGGCGGCGGCGGCTGCTCCGAATTCGCGCGCGTGCTGAGGTGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0012900.1 | 1 | 9114796 | T | C |
| Osa01LNT0012900.1 | 1 | 9115623 | G | T |
| Osa01LNT0012900.1 | 1 | 9116152 | T | G |
| Osa01LNT0012900.1 | 1 | 9116913 | G | A |
| Osa01LNT0012900.1 | 1 | 9117390 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0012900.1 | osa-miR5543 | Cleavage | 4.5 | 17.316 | 1 | 21 |
| Osa01LNT0012900.1 | osa-miR5795 | Translation | 5.0 | 18.375 | 1 | 22 |
| Osa01LNT0012900.1 | osa-miR1437b-5p | Cleavage | 4.5 | 11.26 | 1 | 21 |
| Osa01LNT0012900.1 | osa-miR2095-5p | Cleavage | 5.0 | 11.045 | 1 | 22 |
| Osa01LNT0012900.1 | osa-miR2118i | Translation | 3.5 | 16.552 | 1 | 22 |
| Osa01LNT0012900.1 | osa-miR2928 | Translation | 5.0 | 10.012 | 1 | 20 |
| Osa01LNT0012900.1 | osa-miR2928 | Translation | 4.5 | 12.648 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0012900.1 | 1 | An9 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0012900.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0012900.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0012900.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM576 | RM3412 |
| Osa01LNT0012900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0012900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0012900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0012900.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)