>Osa02LNT0154900.1

CTATCTCTCTCTCATTCTCTCCTCAACCTCTCCCTCTCTCTTTCTCTCGCGCATGCAGGCAGCGCCGGGCAGCGGGAGGCACGGCTGATGACGAGGCGCTGGGAGCGGGCGCCCGCCACCGCCACGGCCTCCGGGAGCGGGAGCGGACGCTGTCGCGGGCGTCCACACATCCTCCCTAACTGCCGGAACGACCTCGCCGCCGCAGACGACGCTGCGGGCGAACTCTCCTCTGCCCTCGCTGCCGCGGGCGTCCACGCCTCCTCCCTCGCCACCGCGGTTGACCACGCCGACGTCGACGGCGACGGCAACGGCGAGAGCGGTGGCGGCTCGCTCGGGAGAGGCCGGGACTTGTGGATCCAGCCGAGGCGAGCGACGGCGAGAGCGGCGATGGCTGGCTCGGGAGCGGCAAAGCGGTGGCGGCGGCGGATCTGGTGTCGGGCCCTGCAATGGCGTGGATCTGGCTCGTCCGGCGGCCGGCCGCGGTGGCGCGGATCCAGCGTGGGCGGCGGCCGGCGACCGGCTAGGGTTTCGCCTTTTTTTGGATTTTTATTTTTTTTTTGCCAAAAATATCTTTGCATGCGGTTGGCTCAGGGAACCGCATGCAAAAATCACATTTTCGCATGCGGTTGCTCTAGCCACATGGGAAAATAGCGATTTTCGCAGACCTTTCCTCCCATACGGGCTGGCCAACCGCATAGGAAAACCGATTTGGCTCTTCTTTGTAGTAGTGCATCTTCCTCTTGATCTTTGCTGATGTCGTACGTCTTCCTCCTCTCCGGCCAATGCCTCTTAGGTGCTGCACCGTATAATTACTTGTTGCATATATATGGTTGCTTGATTGTCTAGTACGTGCAGTCTGTGCGCACGCGCTATATATATGGTTGTCGGTAGGCACGTGAAAAATTGTACTCCCTCCATTTTTAAATATTTATTAACATCGTT

Explanation	CPC Score
noncoding	-1.06011

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0154900.1	osa-miR6248	Cleavage	2.5	7.356	1	21
Osa02LNT0154900.1	osa-miR530-3p	Cleavage	4.5	12.946	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0154900.1	2	qLRS-2	Resistance or Tolerance	Drought tolerance	RM322	RM324
Osa02LNT0154900.1	2	qMXA-2-1	Morphological trait	Root	OSR9A	RM71
Osa02LNT0154900.1	2	nan	Resistance or Tolerance	Drought tolerance	RG83	RG171
Osa02LNT0154900.1	2	qPH-2	Morphological trait	Dwarf	RG324	RG83
Osa02LNT0154900.1	2	qLER-2	Morphological trait	Culm/leaf	R2344	R712
Osa02LNT0154900.1	2	qEML-2	Morphological trait	Seed	R2344	R712

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus