© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0157000.1
GTGGCCTGTAGATTTCATGATATGTATGTGATATGAAAGTTAAAGGATTCAGTCTCTGAGTCTTTATGGTATGTATGTGATAAATCCAAAAATTTCCCTTCCAGCTCTTACCAAGATTTTCTTTTTCTACCTGACCTAGAAGAAACCATTGTGTCCTGAACTAGTTTGCATCCTATATGAGTATATATCATCATCAGCTACCTGCACAAGCACAACTTTCTGTACATACTGTTTCCATTAATTAGTTGCTTCCAAACCTTAGCCGGTTACAGTACATCCTTAACCTGTAGTAATTACATATGCTTTAGACAGTTTAAAATTTAATAAGCAAAAGAACTTGTATCCTGACATAGATTAAAATTTAAACAGCAAATAAGACTTACACTCTACCCAACTGCTGCCAGAATATATTGTGAAGTTTAAAACATTCTTTTTTTTTCTATTGAGTGCACTGTACTGATTAAAGTTATCTTTTTAATAATGGAGGATGGAGCAACTGGCGAGATGGAGCTAATAGATGCATGACTGTTGGAGAGCTACCGGCACTTCTATAGCAGAATCTCGCCATCCATATTTTCTTATACTCTGTTGTCCTGTTTCCGCATAAGATGACTTCTTCTTATCAAGAAATTTACTGGGCAGGCATAATGCGTCTGAAAGGTATTGCACTTGATTATGCGACAAGTGTGTTGGAAATTCCTGTTTTTGTGCCAAATAAGTGGGGAGAGAGATACATACCATGAGAACCTCTCTGTTAAGATGTGTGCATGATTTGATTGTGCTCAAAAGGTTGTATAAATTACAATTTCATTTGTGATGTTTTTGGATGCGATCTTGTTAAGCTCATACTAGAACCTTCGAGTGACAATATATGCTCTATGTTTTTTTTTGGTAGTAAAAGCGTATGATCTGTGTCATTTTGCTGTGCTCCTTTGCCTTTTTTTTTCTACACGTTAGTTATTCACCTTTCAGTATATCAGTTTGACTAATAAGTGAATGGTCCCTAAATTCTATGGGATGTACTTGGGTAAGGTGTTCTTGGGTGCATTCTTAGCTTCCTTTGGCTGCCAAAGGAACATATAGCAAACTTGTCAAAAACACATTTAAATTCTAGGAGCATATATACATACGTGCATGTGGATCCACTGGATTTGGTATAAACTCCACCTGGTTGATCTCAACACATGGAGACTGTTGTTTTCTTTATGGCTGACGTTTGATGATAAAAAAACTAATGAGAATGCTCACATTTATTTATGGATGATATGGAGCCACTTCAGAACGGACTAAGCTGGAATGTGTTGGCAGCTTATCACTAATAGTATCGACTTGTGCTCCTTCATGAACCTTAAATTAAGCATCTTACGGCCATGTCGAACCCAACGGCGGCGGGGCCGCTGCCGACGACGGCGGCGTGGAGCGGCTCGATCGAGCGAGCGCGTGGCGGCGTAGGGCAGAGGAGGAGGAGGAGAAGCCTCTCGGTCGGTCGCGAGAACAGCAGCAGCAGCAGCAGCCTCCTCACCGTCTCGGAAACGCAGTCAGAGTTGGCACGGCGGCGGCGGCGAAGTACAGCAGCGGGGAGAGACGGCCGCGGCCGGGGACGGGGATTTCGGGGAGACACGGACACTCCACAAAGTGGGGTACCCTGAAATTATGTCAGGCCACCAACATTCCCTCTGTACAGCGACAGCCGCACCCAAATTCTAATTTTCAAAATTTATAATTTTACAAATTTTAAAGTTGATTTTGATTTTTTTTCATCAAATTTTATTTTTTATATTAAGATTTAATCGTCCGGAACGACCTATATACAAATTTTACCTATAAATTATTATTATTTTCATAATACGTCGTATTATCGGCATTTGGATGAAAATAAGGGAATCCCATACCTTAACAGACCTCTCATCTACAAGCCTTGGATGAAAAAAAGTTTATACATGTCTCCAAAGTGAATGTTTCATGACGTAGGTGAGTCTAAATGTATATTCTGCACTGATTCGCTGTATACTGCTCTATGAGCCTTATGGGGTGGTGAGTTGTGAAAGTTCATTTCTCCACAAGAATTGGATGAAATTTTGTATTTTTGTGGCATGCTTTTCAAACTGTTAAACGGTATGTTTCGTGCGAAAACTTTCTATATGAAAGTTACTCTAAAAAATCATATTAATCTATTTTTTAAGTTCATAATAATTAAAACTTAATCAGTCATATGTTAATACAACCTCGTTTTACGTAAAAAAAACTTAATTTTTATTTTCATCTCGGGAGAAAAGAACACCACAAGGTGTTAGATGAAATGAGCAGTAATTAAAAAAAACTATATTATCACCGTAAAGGCACATTGCTAACATGCACAAGATGCACGACTGATCAAGAAAAACAACGGGACCCGGAGTCGCAATATTTGGTTAATGAACCCAAAGTAGCAGGAAACGCGCACGCAGGCAAGGTGTTCGACGAAAGGAACACATAAGCAAAAGAAGACAAGTAGCGAACCTTGATGCCCGGGAACGACATGGCGAGCTCCTCCTCGGGGATGAGTACGGGCCACTTCTTTGTCTTCTCCCCGCCGCGGCGGAAGAGCTGCTCGGTGTCGAGGAGGCGTCCGCCGGTCGAGGATCTGGGTCGCGGATCCCCTGCACGGCGGCGCCCTCGACGGGGAATAAGTTCACCGGCTGTCCCTCAACTTTACATAAACCATAAAATTAGAAATGTGTACCCCTAAAAAATATTAGAAATGTGTCCTAAGGCAGTAAAAAATATTAAAACCTCTAAACCCTTAAACTAGGATGCCACGTCAGCAAAAAAGAAATTAAAAAAGCACGTGGGCCCACATAAATGTCTCTTTTCTTTTTCTCTTCTCTTCTCTCCTTGTTCTCTCCGGCGCAACTGCAGATGGGGGAGAGGCGGTCGGCGGAGAGCGTGGCACCGGAGATGCGTGGCGGAACGACAAGGAGTGCGCATTGGCTGTGGCGGCGGCGGCGTAGCAGAAGGAGTGGCCGAGAGCGTCGTCTAGGCAAGGCTCCACGTCCATGGACGCCGACGCCGCCCGCGAGCACGTGCACGCGGTTAGCAGTCGTGATGCGCCTGGGGCAGAGTCGATGGCGCAGCCCACCAGAGTCGTCGGCGGTGCCATGGGGCAGAGTTGACGGCGCGGCCCACCGGATCTGGCATGGTGAAGAGGAGCAGAGGCGACGGGTGGTGGGGCGGAGTCGGAGGCGGCGTGGTGGGGCGGAGTCGGCAGCGCCGACGACCGGCGCCGCTGTCGGGCCGACGATGACCCCATCGACGACGAGGATGTGCGAACCACCTGCTCACGACACCGACGATGACCCCATCGATGGCGACGACGCGCCGGACGGCTGGAATCCCAACGACCCACCATTGCCGATGCGGCAGTGCATCGGCGAGCAGCTCCCTCCGTCGCCGTCGCGCCGGCCGCCTATCTCCCCCTCTCCCGCCGCCCCCGCTCCATCGCTCGGCGTCTCTCTCTCCCTCTCCCGCCGCCTCCGTCCCCGCTCCGCCGTCGGTCCCCTCTCTCCCCCTCTATCGCCACTGGCAGGCCACGCTCTCTCTCATCTGCAGCTGCGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0157000.1 | 2 | 10539296 | T | G |
| Osa02LNT0157000.1 | 2 | 10542035 | C | A |
| Osa02LNT0157000.1 | 2 | 10542152 | T | C |
| Osa02LNT0157000.1 | 2 | 10542220 | T | C |
| Osa02LNT0157000.1 | 2 | 10539336 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0157000.1 | osa-miR5817 | Cleavage | 4.5 | 9.823 | 1 | 24 |
| Osa02LNT0157000.1 | osa-miR2873c | Cleavage | 4.5 | 19.534 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR167a-5p | Cleavage | 5.0 | 13.229 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR167b | Cleavage | 5.0 | 13.229 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR167c-5p | Cleavage | 5.0 | 13.229 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR169a | Cleavage | 4.5 | 23.912 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR167d-5p | Cleavage | 5.0 | 13.229 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR167e-5p | Cleavage | 5.0 | 13.229 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR167f | Cleavage | 5.0 | 13.229 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR167g | Cleavage | 5.0 | 13.229 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR167h-5p | Cleavage | 5.0 | 13.229 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR167i-5p | Cleavage | 5.0 | 13.229 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR169b | Cleavage | 4.5 | 23.912 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR169c | Cleavage | 4.5 | 23.912 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR169e | Cleavage | 5.0 | 23.912 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR169f.1 | Cleavage | 5.0 | 23.912 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR169g | Cleavage | 5.0 | 23.912 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR169h | Cleavage | 5.0 | 23.912 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR169i-5p.1 | Cleavage | 5.0 | 23.912 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR169j | Cleavage | 5.0 | 23.912 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR169k | Cleavage | 5.0 | 23.912 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR169l | Cleavage | 5.0 | 23.912 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR169m | Cleavage | 5.0 | 23.912 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR169n | Cleavage | 4.5 | 23.912 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR169o | Cleavage | 4.5 | 23.912 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR167j | Cleavage | 5.0 | 13.229 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR1854-5p | Cleavage | 3.5 | 8.17 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR1857-3p | Cleavage | 5.0 | 12.691 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR2093-5p | Translation | 4.5 | 11.463 | 1 | 20 |
| Osa02LNT0157000.1 | osa-miR2927 | Cleavage | 5.0 | 24.083 | 1 | 23 |
| Osa02LNT0157000.1 | osa-miR2928 | Translation | 4.0 | 13.886 | 1 | 20 |
| Osa02LNT0157000.1 | osa-miR2928 | Translation | 5.0 | 13.483 | 1 | 20 |
| Osa02LNT0157000.1 | osa-miR5490 | Translation | 4.5 | 10.785 | 1 | 21 |
| Osa02LNT0157000.1 | osa-miR2275c | Translation | 4.0 | 9.383 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0157000.1 | 2 | nan | Resistance or Tolerance | Drought tolerance | RG83 | RG171 |
| Osa02LNT0157000.1 | 2 | qPH-2 | Morphological trait | Dwarf | RG324 | RG83 |
| Osa02LNT0157000.1 | 2 | qLRS-2 | Resistance or Tolerance | Drought tolerance | RM322 | RM324 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)