>Osa02LNT0157900.1

GAACAGATGTCATTCACCAATGTGTTACATTTAGCTGGTTACTGGTCAGAGAAACAGGAGGGAGGGAGGGAGGGAACATTTGGAATTTTTTACATGGAGAGAACTCCACATGGAAAATGGAAAAAAAGAAAAAAACTCCATCGAGACAATTTGGAGAGGACTTAAAGTGTTCCTTCAAGAGACAAACTATGAAGTGCTCTAGATAGATCGCTAGTCCTCAGTACACATTTTCCTCCCAGAATTTTCATTCCCCAAAACTTTGCATCATTTTCGTCAGTGGATAACAGAACCTCATGGATCTGACAGTGCTCTATGACTCCCAGGCTCCAAAATTGATTCCATCGGATCATCCATCCCTGTAAGATGTGCTGGAAATTTTGGTGGCCAGATCATCAGCAGTGGATATATTCTTTCAATATCCCCATCCTCGGGACAGATTTCGTAAACCTTGGTCATGTTCTTTGCAACGATGTCCAATAAGAATATAGAATCATCCAGCTTTAGAAATGCTGACTTCCCAGCGTTTGCGATTCCGAGAATACTGACATGGGCACACGATTCTCCAGCCTCTGTAACGGATGCTTGAAGTATATCATCCCTTGCAACAGAATGAGATAATGTCCATGTAATTTGAGACAAGTTGTGAGTCCACACTTGAAGTTTTGTGGGGTGGAGACATACGAGAGTAAACTCATCCTCGAGCTTGCCTTCGCACAGATCAACCTCATCACAATCTTCCAATTCAATCTCATCAGTAATATTCACTTTGGTCAACTCCAGAGTCTTGCAATCCAACACAATGATGATGCTGAAGTTAGTGAGGAGAAATAATTTTCCAAAAGCATGAACTCCTAATGGTATGACCAGCTCGGCCTGTTCATCAGGTCCTGGGAATGAAATAGTGTCGGACGCACGACCAACCCAGATGCCATCAACCAAATGAAACAGATAAGCTATCATGCACTTGCATTTGTAGCCTAAAGCCAGTCGGTAGTACTCTCTCCCATTACCACCATCCTCAGGAAGAAATTCATGGAGGTTGTAGGTGAAAGAACGATCTAGCCACACTTTCAGAGGGGTCTGTGGGTAGACAGAAATATCAGCAGGCGGAAGAAGAGGACTATGCACCGCAAGTTTCCCATAGATTTCGACAAGCACACGCCCATTTCTGGAATCCCACATGCTCAAGGGCACATCGCTCCACGCATCGAAGTGTCGGCTGGCGCGGCCGAGGAGAACACCTAGCTCAGGAGGATGGCCTTGCAGGGCTACGAAGCGAGGGCAAGAGAGTACCGAGGAATCGATGTAGAACCCCAGCGTCGGAGGGGGGTGGAGGCTGCGGAAGCGGCGGAGGAAGACCAGGTCGGAGGCGTTGCGGAGCCAGGACTTGCAGACGAGGGAGGCGCGGACTAGGCAGTGGGGCAACGCGACGCGGACGAGGATCTCGCGGAGGAGGTCGTCGTTGTCGAAGACGCTGGAGGTCGCCGTAGCCGTAGCCGTAGCCGCCATGGCCGTCACCGTTGCTGATAGGGATAACCGCGCCATCCCCTCCGATGCAGCACCATCACCCAGCTCCCCGACGGCCATTTTCTCTTGAGGGGAGGGGAGGAGAGGGAGTGGAGGTTGACGAGGGAGAGACGGGGAGGAGGACGACGACGACGAGGAGTAGGAGGAGAAAGGGGAAATTTCGATACCCCGCCGCCGCCGCCGCGCCGCTTGATCAACCAGGGGAAATTTTCGTTTCTCCGTGCACAGTGACTTCTGGAAACTTCGGGAATCCCGCGGAGACTTCTGGAAGCAGCAAATAGATTCT

Explanation	CPC Score
noncoding	-1.10649

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0157900.1	osa-miR6248	Cleavage	4.0	20.141	1	21
Osa02LNT0157900.1	osa-miR416	Translation	4.5	20.0	1	21
Osa02LNT0157900.1	osa-miR396e-5p	Cleavage	5.0	17.918	1	21
Osa02LNT0157900.1	osa-miR395w	Cleavage	4.5	4.92	1	22
Osa02LNT0157900.1	osa-miR2878-5p	Translation	3.5	20.31	1	24
Osa02LNT0157900.1	osa-miR396g	Cleavage	5.0	17.918	1	21
Osa02LNT0157900.1	osa-miR396h	Cleavage	5.0	17.918	1	21
Osa02LNT0157900.1	osa-miR396d	Cleavage	5.0	17.918	1	21
Osa02LNT0157900.1	osa-miR5502	Cleavage	4.5	23.206	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0157900.1	2	tgw2	Morphological trait	Seed	RM290	RM550
Osa02LNT0157900.1	2	qLRS-2	Resistance or Tolerance	Drought tolerance	RM322	RM324
Osa02LNT0157900.1	2	nan	Resistance or Tolerance	Drought tolerance	RG83	RG171
Osa02LNT0157900.1	2	qPH-2	Morphological trait	Dwarf	RG324	RG83

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus