© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0159000.1
GCCAAAGCCAACCGGCCACCTGCTTTCCATGTCCAAGAAGCAAACAGCTTAGACAGTCTGCATACGACATGTACAGAGGTATTGTTCCTTGAGCATCTATAATACAAGAAAAACATCGGTCGTCAGGTAAGATGGAGGACTCAACCAACCAAACGGACTATACTGTCAACCTTCGCTTGCTGTCAGGAGGCTATCAGACTATTTTGCTACCTAGTATCCTGCCTACATGAACAGTCCCAACAGCACGAGGACCGCCAAAAATAGCAGAACACATTTCACTGTGGTTTGTCCTTCGCATCAGATTCAGATGCATACTCTAGTGCATCAACCACAATGTTGTTGGCCACATTAGAATCAACCTTCAAAGGGTCAATTGCCGTTGAATCGGGGATGTCGTTCTCAACTTGTGAAGGGTCTATGTCTACCTCACTTGCATCAGGATTGTCTTTCTTAACTTTTGAAGGTTCTACTACTATAGTATCAGGATCGTCTTTCTGGTCATCTTGGCCTTCTTTGCTCTTGTCACTGCCTTTCCTGCTGAACATGTTCTTCAGATTATGAGCTGTTTTGTTCCCCGCATGTTTCACCATGTGCACAGCCTTCTTCCTCAAATGCCTCTTGGTCGGACTTTCCGACTCGCCTCTCTCAGGACTGGAATGCTGGTCATCTGGCAAGTTTTCAGAAGGATCTTCATCGACGACGTATCTTACTGACACCCTTTTTTCTCCAAGTGGTTTTATATTTGGGTGAGGCGTCACACATGGCGAGGCTTCATCATCACTCTCTTTCTTTGGGCTCTTGAACATCGCACCAGCTAGTTTCCCCAAACCCTTTTTGACCTTGTGGAGATGATGGCGTGATTTGCCATTGGCTGGTTCTTCAGTACTGGAGTCACTTCTCTGAGATTCTGATTGGCACGACTTAGGGCTGTCACAGTAGACATCATTCTCTCGTAGGATTCTGGAATCCTGACACCTCGCACGTCCTTTCCGAGGCTCCCAAGTGACTGCGACATCACTGCCTGGCCGATGGACCCAAACATCAACCTTTTCCAGTCCTTCAATGTCTACTGGCTCATATTCAGCAGATATCTTTCGAAACTCCTCTGATGATTCACTTTCATTGTTGGTCCTGGACGAAAAGCTAGACCTTGGTGTGCTTGCTTTACCCCCCTTGGGTGTTCCACACTGCTCATCGTCATCGTTTGGAACCTTTTCATTTTCATCTTCAAGTACTGTTACTGCTATATGAATCCGCCCTGTCTTTATATTCTTCAGAGCAATCCATATGTCGTGCCTTTGTCCACCTCTCAATTTGTTGATGCTTATGGAACAGTCACCGAGTGTGTCGTCAAAGATGGGATCCTTATCTCGAACTTGAAGAGAGAGAAGATTGAGAGCTGCCCATGAGGTTACTGGTATTTTGAACTCCTCCATCCATTTTGGATTGAGTGTTTTCTTGTGGATCTTTGTCTGGAAACGATAGGGTCCAAGATGGCCTTTCACGTATGGATCAGCTAATCCATTTGGATCAGAGGGTTTCATATCAGCACCTTCCAAGATCTCTACCTTGGCATGTGCAATAGGTGGCTTCTCATCAACACTAAACCAGCTATCTGTTGATTCCGATGCAAACTTTTCCAAGTCAATAACTAGCATATTAGGCTCAACAAGGGTCTGTCCAAAGGCGACATCCAACATCCTGTCAAGCCATCCAGAAATTCCTGGAAGTTCAGTTACATCAAGCCCATGACCAAATAATGGTTTGACTGTCATCTGGAAGTATGGAGGCTCAACAAAGCACACTCTTACGCGACCAATATATGGCCACTGTCGGAGAAATCGCACCCCAACTAGGACCTTCCCTTCAACATGCATCCCAGTTATATGCATGTTTGCTGTGATGCCAAATCCTAATCTCTTCCTAAGTTGCACAGCCATTGTTGCATTCATATCATCTGCAGATAGGAAGTTCATTCCTATCTCTAAAACCAGATGGTCATCATCAGTTGATTGCCTGACAACCCTAATATCTGTAAACATTGGTGGGTTCCTGCCCAAGTAAAGGTCTTGGATCACTGCTTTCCTCGCTGTCCATGGTTTGAACTTTTCCAGGAACCATGGGAATATGGGCAAAAGGAACTGCTCAGATGCAACCCGTTCCATGCAAACCGGCCAGATCTTCTCAACAGCATAATTCAACCACCTGACAGTCTCTGCATCAGAGAGAAGCCTTCTTTGGTTTGCACATTTCCTTTCCTCATGTTGTATTCGCTTTCGCAGCCTCATTGTGTATCGTTCATTCACCGCGAACAGATAGAGGAGCGCGGCGAGGAAGATCGCCGGGTGCGCCCACCCGGCCGACACGGCGGCCCAGAGCGCGAGCAGCACCAGCGCCGCGTGGTGCACCACCGTCACCTCCGTTATGTCCATCGCGGCGGCCGAGGCTTTTTTTTTTTTAGAAAAAAAAAACTAGAGACGGCGGCGCGGCGAGCGAGGGTGTGTGGGGGGCTCACGCACGTAGACGTAGGAGTACGCGCGCGCCGAGGCGGGGAAGATATGGTGGATGTCTCACGGCCTACTACGTGCCGGAGTGGTCGGCGGCGCGGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0159000.1 | 2 | 12399009 | T | G |
| Osa02LNT0159000.1 | 2 | 12399573 | A | C |
| Osa02LNT0159000.1 | 2 | 12399607 | A | T |
| Osa02LNT0159000.1 | 2 | 12402421 | A | T |
| Osa02LNT0159000.1 | 2 | 12403122 | C | A |
| Osa02LNT0159000.1 | 2 | 12405140 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0159000.1 | osa-miR5529 | Cleavage | 4.5 | 20.221 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR5530 | Cleavage | 4.5 | 20.67 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR5793 | Translation | 5.0 | 17.105 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR5825 | Translation | 3.5 | 15.791 | 1 | 24 |
| Osa02LNT0159000.1 | osa-miR5826 | Translation | 4.5 | 13.621 | 1 | 24 |
| Osa02LNT0159000.1 | osa-miR6248 | Translation | 3.5 | 19.539 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR6248 | Cleavage | 4.5 | 12.57 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR156j-3p | Cleavage | 4.5 | 24.801 | 1 | 22 |
| Osa02LNT0159000.1 | osa-miR160d-3p | Cleavage | 4.0 | 13.854 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395b | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395d | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395e | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395g | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395h | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395i | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395j | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395k | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395l | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395s | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395t | Cleavage | 4.5 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395t | Translation | 5.0 | 15.604 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395u | Translation | 4.0 | 15.604 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR160e-3p | Cleavage | 4.5 | 18.028 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR160e-3p | Translation | 5.0 | 13.854 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395m | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395n | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395p | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395q | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR395r | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR810b.2 | Translation | 5.0 | 14.569 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR1870-5p | Translation | 4.0 | 12.576 | 1 | 24 |
| Osa02LNT0159000.1 | osa-miR827 | Translation | 5.0 | 15.187 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR2867-3p | Translation | 5.0 | 17.125 | 1 | 20 |
| Osa02LNT0159000.1 | osa-miR395y | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR5077 | Cleavage | 4.5 | 12.605 | 1 | 19 |
| Osa02LNT0159000.1 | osa-miR5152-5p | Cleavage | 3.5 | 21.318 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR5508 | Translation | 3.5 | 15.413 | 1 | 21 |
| Osa02LNT0159000.1 | osa-miR5517 | Cleavage | 4.0 | 14.692 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0159000.1 | 2 | qPH-2 | Morphological trait | Dwarf | RG324 | RG83 |
| Osa02LNT0159000.1 | 2 | np2.2 | Morphological trait | Culm/leaf | RM324 | RM262 |
| Osa02LNT0159000.1 | 2 | qSS-2 | Physiological trait | Sterility | RM301 | RM263 |
| Osa02LNT0159000.1 | 2 | tgw2 | Morphological trait | Seed | RM290 | RM550 |
| Osa02LNT0159000.1 | 2 | nan | Resistance or Tolerance | Drought tolerance | RG83 | RG171 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)