© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0013700.1
TTACAACGAGTTCCATTCAAACTCTGATCCATTCAAAACAGTAGCTGATCGACCTTGATCTTTTTTTCTTTTCCAACAGTAAGTATTCAAAGAGCAATTTCATATGCTCTGATAAGTTAAAGTGTCAATAACATGTCATGATACAATCCCCATCAAGAGCCCTAAGTGTTCTATTTACATTGTAACTCTAGTTAAAGAGATTAATCCTAGTACTAGTGTACTGGTACAGTACAACGGTACAAGTACCAGATCTATGACACGTGTGTAGTATACCTTTACAGTTCCCCGTTTCCCGCTATGACGCGGCACACCAAAAATTTCAGCGACCCCGCTTCGACGGCGGCGGCGGCGGCGCCGCCGGGCGGCGGACTACGTGGCGACGGCCGTCCAGTAGCTGGTCATGCAGGCGCTGGCCGGCGTGCTGATGATCCGCGCCCACTCCCACCCGCCGCCGCACCCGTCCGCTCCTCGCCGCAGCTCCGCCAGCCTGCCGTCCCGTAGCTCGAAGACCACCGCGTCCTCCGAGAACGGCACCGGCCGCGCGGCCGCCACCTTCTCGTCGCAGCTTCCCACGAAGCCGTCCGCGTAGTGCGCGTCGGCGGCGGAGCCCAGGGTGGCGCAGCTCTTGTCGCCGCCGGCCGCGTTCATCGCCACGGCGGACGGTGCCGACGGGTGCCCGTGGCTCGTCCACCTCCACGTCCAGTTCTCGAGGTGTCGCCGGTAGACGTCGCCGTCGGACCCGATGATGAACAGCTGGGAGCCGTCGAAGCACGGCCCCGGGGCGCCGACGATGGCCACGTCCCGGTGGGGCGTCCCGTGCTCCACCCACTCCCACCCGTCCTGCGGGCTGAAATGGTACTCGACTAGGCCGCCGTGCTCCGACACCATGAAGATGGAGCCGGCGAGGGAGAGATGGGACGGCCTCATCGCTGTCCCCGGTGACCGTGAGAGGACGAGGTGGGGTGATTGGTAGTGCTTGTGCCATAGCTCTGTGATTCTGTTGTACTGGTACAGGCGGCCGTTGCGGCCAACCGCAAAGATGACGTTTCTTCTGAACACTTCCTGATCCACTATGAATGCAATCTTGGTATCAGGAGGGCTCTGGCAGTCCTTCCACTTGAATTTCCTTAATGCAACCGTGAACTGTAGTAGCCTGCCTCTCTTGTTAACAAAGAAGAGTGCGTCATCTGTTGTCACTCTGCGTGGTAAACCTGGAATGCCATCCCATGGAGACCCACTTGCGACCTGCCTTCCCTTCCTCATTGCTGTGCAGTTGATCCATAATAAGTCATCTCCATTTCTTTCTCTGATATGTAAGTTCCCGTGAACATCGACAAGATACAAGCTGCCATTATAGCTTCCTACTGTACCTTTCATGGAAGTAGTGTGCTCATGTCTTAGCCATAACCAAACACCATTATTGTTTAGATATTCAAAAGTTAAGCCGTTATCTGTTATGAGAAAAAGTGATCTATCTGCATGCATCACCCGCATGTGGAAGTTAATATCAATACTTCTTGATAGAAAGTTATACGATTCGATTTCATCCCTCTCATGGGTATTAACGTACAGGTATTGTTGCTTATCTTCTTTACGCCATCTGGAAGGTGGGATATTGCCCAAGTCATTTGATTTGGTATCTGCAGCTACATTCTTTGCTCCAGTAATACAATTTGTTGGACCATGCTCTTCTGTGCAATATTCTGCATTCCAACCTTCTGTTTCTGGTGCATCTAGAATGGACCACTCATACTTGTTTGGCACTTTCCTTCTCATGCTATAGTGTTGACTTGGACCAAAATCATCACCACCCATACCAGGCAAATGCAGCTCCCCAAGCCTACCATCATCCAGTGGGAATATTACTCGGCCAACTTGAACCTGTACACCTCGGACATTTCTTGCTACCTTTGTATTCTCAGGAGACATGTGATTTACCCAGAGTCCTCTGATCTTATTGCTTTGAGCTCCACCTGTATATTTTGGAAACTGATACTCGAATACTTTTCCTGTGGTTGTTGTAAAATACATTGAAGTTGCATCATTAGATTCATCTTGTTGCACTTCTGTGATCGAACTAAGTCTTTGACTCTTAGGAGCTCCATGTTTATACCATTTCCACTTCCTTCTATGCAAGCGCCGCTCCACTAATAAACCATCCTTTGTTATCAAGAAAAGTGATACTGAGTTAGATCCTAGCAGGCCATGTAAAGCACACCCAACTGATGAGCTTAATGAGACATTCTCTGCTGTTTCTTCACTCCATATGTGCTTTTTCCATGATGGTCTTGATTCTCTGTCGAACTCATACAAGTCTCCTGTAGAACTGCACCACACTTTCCCATCTTAGCACTTACTGTGAACACTGTCCCTGGTCTTGCATTTCCAGCATCAGATATATATGATACATCTCCTCCTGGTGGGTGGCCATGGTAAGTCCACCTTAGGGGCTGAAGTTCTGTGACCTCCACTAGGGATCCATTTGTAATAGATAGGAAAAGTTTCCTTCCATCATAGGACACTATCCCATTTCTTATGTGCATAGCTTGACTTTGTGTTTTTTCTCCAAGGACTATGAATTGTTGTTCAAAGTTGAATATTACCTCTGTCCAGATAGGTTGTGCATGTTCATTTAGCTGTAGCTGATAGAGGATTCCAGCCTCTGAGAGAGCAAGAATAGTTGTATTCACAATGAAAGTTGCTGTAGCATAGCCAACTGAAATTGGTAGTTCATGAGGAGCAATCACCCATGCCAGCCCATTCCAGAACCTCTCATAAATTGATCCACTTTGCCCTGTCACCCACACAGATGATTCTGACATGCGCGTCAAGGAAATCCTTTTTCTTATGGGCAGGACTGGATCATTTCTATCTGCTTGATCATTGTCATCGATCTCTGCATCCTTCTCCTCCTGACTAGAAATTGAAGCACGGCCATGTCTCCTTTCCGGTTGCTCGATTGATCCTACCTTCGTGCAGGTATCGTTGATGCAGGACATCAAATTGAAAGGCATGCTTATTTCCACCCAGGTATTACTCTGTTCCTGGTACTCCCAGAACTTGTTTGTCTTCTGCTTAAACTTTGCTTCCTGCCTCAAGCTAGGATGTAAGGGGCACCATGAATGAACAGAAGCAGCAGACTCCAGGAGAACACATGCTACAAAACATAGGAACCACAACAGGAATCTGCAACTGCAAGATGGATCATCCATGGCCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0013700.1 | 1 | 9645741 | T | A |
| Osa01LNT0013700.1 | 1 | 9647437 | A | T |
| Osa01LNT0013700.1 | 1 | 9647552 | A | T |
| Osa01LNT0013700.1 | 1 | 9647849 | A | G |
| Osa01LNT0013700.1 | 1 | 9644513 | G | A |
| Osa01LNT0013700.1 | 1 | 9648265 | T | C |
| Osa01LNT0013700.1 | 1 | 9649637 | G | A |
| Osa01LNT0013700.1 | 1 | 9650008 | A | T |
| Osa01LNT0013700.1 | 1 | 9650501 | C | T |
| Osa01LNT0013700.1 | 1 | 9650896 | A | G |
| Osa01LNT0013700.1 | 1 | 9647301 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0013700.1 | osa-miR5834 | Cleavage | 4.0 | 11.624 | 1 | 21 |
| Osa01LNT0013700.1 | osa-miR395c | Cleavage | 5.0 | 19.68 | 1 | 21 |
| Osa01LNT0013700.1 | osa-miR171i-5p | Translation | 4.5 | 14.86 | 1 | 21 |
| Osa01LNT0013700.1 | osa-miR395o | Cleavage | 4.0 | 19.68 | 1 | 21 |
| Osa01LNT0013700.1 | osa-miR1427 | Translation | 5.0 | 21.101 | 1 | 21 |
| Osa01LNT0013700.1 | osa-miR1861b | Cleavage | 4.5 | 23.772 | 1 | 22 |
| Osa01LNT0013700.1 | osa-miR1861f | Cleavage | 4.5 | 23.772 | 1 | 22 |
| Osa01LNT0013700.1 | osa-miR1861i | Cleavage | 4.5 | 23.772 | 1 | 22 |
| Osa01LNT0013700.1 | osa-miR1861l | Cleavage | 4.5 | 23.772 | 1 | 22 |
| Osa01LNT0013700.1 | osa-miR2098-3p | Translation | 3.5 | 20.036 | 1 | 20 |
| Osa01LNT0013700.1 | osa-miR2865 | Cleavage | 5.0 | 22.038 | 1 | 22 |
| Osa01LNT0013700.1 | osa-miR3981-3p | Cleavage | 4.0 | 17.984 | 1 | 21 |
| Osa01LNT0013700.1 | osa-miR5150-5p | Translation | 4.5 | 23.8 | 1 | 24 |
| Osa01LNT0013700.1 | osa-miR5490 | Cleavage | 5.0 | 12.158 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0013700.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0013700.1 | 1 | An9 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0013700.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0013700.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0013700.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM576 | RM3412 |
| Osa01LNT0013700.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0013700.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0013700.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)