© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0162900.1
CGCCAAACGATTTTCTTGCAAACATTTGAAGACCTCTCAAATCCTTGCTTGGGGTAAAGAAATGGCCTTGCTGGCCATGTAAATTGGACCGCCCACTTGCATTATACATATATAAAATATATCTACAAATAAAGCTCTTGTTGCATTATGACTAAGACTGCTATATCCCAAAATTTCACATATAACACAAAAATTTACAACACCGAATTGGGTCCGCCTAAAAAGTTATATATGCAATGCACTGGTATGTGCCTTCACGTTCTGAAATATCCATACAAACAAATCGGCTCTCTTGACTGCCAACTAGTCAAGGTGAGCATGAACCTGACAACACCTCTGCAGTCGAAGAGTAGCACGGCATTGCTTGTATCATGCTCAAGCGCAAATATTAATTCAAAAATAATTTTCTGAGACATCATCATGCAAGTGTATCTAGTGTCGATCCTTTGATGAGAGCATTTGTCATCTAACCATATGATAAGTCCTGAACGGTACGACCACTAGTGTTGCGAGGGGCATATGGTCTTGGTACCTTCCATCTCAGCAATTCCTTTGTTGATTTTGGACCATAGGCCTTATACGCTCCGTCAATTGATGAGTAAATCAGTGTAGCTTGATCAGACCCACGATTACACTTGACCAACCGAACAACCTCCCTAGAATTTGTGGGCTTAGCTTTCAGGTACAAAATAAGCTTTGAAGGTAAGGATCCTGGAGCATCCTTTTTCCCATGGGTCATTTCTACAGTCACCAAATCATCCCACAATACATCCCAGATTACAGAGCACGGATCCTTTGCAGGACTGAACTTTCTCTGGGTCATCATTGGGACCTGAAGCAGTAGTACTCTTCTGTGAGTAATTAAAAGAATTTTACCCTTAGGTAGCATAAAATGATCCTCATAAGCATCAGTAGATGCAAACTTTCCCCGGACTTTGAAAAGGTCAACTTGGCCAAGAAATGTAGCATATTCAGCTAATTGTAAGATAGCCTGGCCAGCTGCTTTATGGTCGTCATAAGGATAGAGCAAGCTATCACCACCAATGGCTCGAGGGAGACGCCTACGAGCCAACTGCTCCTCAGCCATTATAGCTGATGATATTTTCATTTTCACAGCATTTGCACCTTCTGTAGTTTTCGACAAAAGATCAAGAACTCCACTCACTGGCTGAGCGGCTGCACCAATTAAACCTTTTCCGACACCTTGCACAAAGCCCTCAACACCAGAAGATTTTGCACCCTCAATGGGCTTTGTCAATATGCCTGTAACACCTCTGAAGATGCCCTTTGCGAGAGCCCCACCTCCATCTCGTATGACATCACCAAAGTCTTCCACTCCTTTGCTATCCTGTCTCATTCGGCCCTGAATGAATTTCTTGTCCATGGATAATGCTGCTATACCCTTACTCATATTACTCAAAGCGCTACTTGCATTGCCAAGAATGTCAACACCCGAAAGTAATTGAAGAGGTTGGCTGAGAATATCTTTCTGAATGTTAGACATAGCAGAACTCATTAGTGCACTTTGTCTCATGCACAATTCTTCCCGATACCTTTGAGCTATGCGGACCGGCATGTGCTCCATGTTTCCCAGTGCCGTCATTAAGGAAGACCAGAACCCAAGAACCCCTCTCGGCCTCTGGGTAGGGGACATTGCCATTGAGACTCTAAATCGTATTTCAGAAATATTAAGAAGCCCAATCTTCAGTATAGGGTCAACTGAGACAGCAGAAGACTCTGAACTGGATATCCTATCAAATTTTAGGTTCTGAATCATCTCATGGAGGCGCCAAATAATTGGCTCATGGATATTAACAAAAAACACACAGTTCTCAGGAACCTGCACACCAAGATATGGATAAACACAAAATTCGAGAGAATTATTGGTCTGCAATGTCATAGAGAACTTGATGATGTAGTCTGATTGATTCTCCATCCTTTGAGGACAAAAAAGGACAGGCATAAGAACGAAAGGTAACTGATTGTCCACTTGAATCCAATGCATCTGCATTTTGAGCCTATTGATTCCAGAGCCCATTCCAGATGAGTAGGCTAGTAATAGTTGCTGCACTGAGAGGAAAAGAATTTCCTCAGGCATATGGTCAATTATGGAAAGTCCAAACTCTGTTAGCTCCAAAGTAACATGAAATTCACTATCCAGATCTGGAGATGACTGCCCACTGTCGACCTCTGATGGCTGAAATATTGGTGATAATAGCCTTTCTGTTGTCTGTTCCCGAGTTCTATTATCAGGCAGCCAATCATTAATTTGGGTAACATGAAACTTTCCCTCCTTAAGAACAGTGACACGCAAAGCCTTCTTCACCCTGCTTGATGCAGCTAGCGGTTGGTGATCCATGACAACATCAATGTCATATGTCATGGAGGTTGTAGGGTCACTTCCATCTACTAATACTTCCAAAAGACGCCTTCTGCCAATATCCTCCCAAAAGAAGGAAGCCGATGAATTTGGAGGCAGACTACGCCATGAATAATCATCACCACCAACCTGCCGAAACCGTACAGGCAAGAACATGGAGCGGTTCTCTACCCTGTAAGGGCTGGACCAGCAAGCGAGCTGAAATACAACTTCATAACGTGAACATTTTGTTCCACTTCTAACGTTTACTCTCACCAAAGCTTGATCATTTCCTGTAGTGTTGTTCATGAGCACACACATAACCCCATTAGCATCAATGCTAAAAGGTGTACTCCATTTGTATCCCTCCAACCGCAACTTTAAAAGTTCGTTCCCAAATTCTGATCGCCATTGAAACGCTTGAGGAGGACTACTTGGATGTAAATGCTCTTCAGTCTCACTATGATACTCAGATAGGATAATACTTCTTCCAATTCTATTGATAAAAAGTGCTCGTGGGAGAAAATTTATAACCTTAGTTCTGTCTGAAGTCATCTTCAGCTGAGCCGAGAACCAGTAATATGACCCATCAGAAGTAAATGCTTTGACATCAACATGCTCCTTGTTCTCAAGATCAAAAAGGGACACTCCTATACTGTATTGTTTGCAACTGCCAACAGCCACACAAATCGCAACTCGTGCTGGGCTGGAATTGTTATCCCGAGATTCAAAGCGCACACCTGCAGAGCGGTTCATGTAATCCTGTGGCGACAACATTACATAGTCTGTACTACAATCTTCTATAACCTCCAATATGTGCATATTTCTCTGTGCCACTGGGCCTCTTCTGATAAGAGATTTTGAAGAATATCTGAGGGAAAATTTTGAAGATTTAGCTGCTCTGCTTAGTGAGTCTGGTCTGCTAAGTGACTCTGCATCTGAGTTTTCTGTTGGTTCCACCTCAACGATGCGATATGATAGTGGAATTGAAGAAATATTTTTTATCCAATATGGAACAAATAATCTCAGTGTCTTCGGTGCAGCATCACTTGCTCCCAGATCATGTTCAACACTAACACGAAGTCTCCTCTGGCTCCTATTTTGAACCATCCAGAATGAAGTAACATGTTCCAGGGACATTAAGTCCAGTATTAATACAGTGTCCTTCTCTATAATCCAGCCATTTTGGACAAACATAGTTAGGTAAATTGGTTTCCGGATATCTGCTGAATAGATAAATGCACTTCCACCAGACGAGACAATACCATGCTGCCTTTCAACCATACTACCTTCCGTGGACTTCTCCCAGATAGCATACTCGGCTTCATATGGAAGCTTATTTTCGAGTCTAAGAATTGAGTTGAAACAAATTTTCCAGTCATAAATAGGCATATTTAAGTCTGTGTGAAGAATGGAAGCATCAATTCCAACACTAAGCCAGAAATTTTGTTTAATGCCAACAGGAGGACAGCAATATGAAAGCATATCCTTTTTCTCAAGATCAGCCAGTCTAAGAACTGAATTCTTTGAGGGCACAGATGACTGCTTTAAGGTGCTTTGCCTTGAAAGTGAAGATTGTTGTTGCTTGGGAATGCTCTCAGAACCTAGTGAAAGAACCTGACTCCAACTATATGATTCCTGTGATTTTTCAGAAAAAGGGCGAACTTGCAAGCACAAATCCATATCCTTGATCATCGCTGTCCAAGGCAATGCAGTAGATGCATGAGGCTCCATAACAGCAATTATTTTCCTAGGAATTTCTGCACTTTGTTCTTGCATTGACTGCCGTGAACGCACCCACCGCCTTCGCCTAACAAAGTCATGTGGTGATTTGGAAGATTTCCAGGAAGATGGCCAGTTCAAATTTTGAAAATTGGCAGCATACGCCCATCCATCACTATCCACGGAACTAGATATTTCAATTTTCCATGGTGACGTCCATTTCCAGCCAGGTGGAAGACGAGGTTCAAAGAATGCCTTAGATGAGTAAGAGCCGTCCTTTGTGCTCCATGGCCCTACATCACAACCCTGATCACTAGCAGGGTTACTTCCCCACCCTGAAGTTGGTCGGTACCACTGATTTTCAAATACTTCATCAATAATGCTTGTGGAACTGGTGGAACCAGCATTTGACACAGAGCTACTATGCATGGTTACAGGACAGACAGATACTTCAAGCTTTATGTCAAAACCATTTGCAATAATAGCAAGAGCCCTTAAGCTTGCATGTTTCTTTCCATTCCTCATGGTGACCTCAAGTGCAAAATGGCTGTTGTTAAGTGATTTGGGGATGGTTGACAATGGCAAAGCTGCAGTAAAACATTCCCATGGACCATCTGGGCCAAGCCCTATCCAGAAACCACTCTTTGCATTGCTTAAGCTGTCTTTCCAGCTCTGGAAGTTCGTCTGCGTAGATCTTTCTACGTAACAACTTGAAAGTACTAACATACCACAGTGTTTCACATTTTCATGATTGAGTGCTTGGCCCTTCCTTGTAAGAGGACATGTTAGCACACGCTTGACATCAGCAGCTTGCTGAATGATCCTCATAGAAGCAGCTCGTTTCAATATTGTTGCACCCCGTCCAATAGGAATTGACAATGAACCAAGTACTTCACCTTTCCCAGCCTTTGATGCAAGATTTGTTACCTCAATCTCTAAATGAGCGGATGCCTGCTCTGGCACTTCAAATATAAAATGTTCATTCCACTTAGCATGATGTGTCTGTGATTCACAAGTTTTCAAAGGTTTTACACATCTTGTCCTGGCACTCTGAGGGAATATCTTGTACTGGTCAGAAACATCACTTCCAACAAGCAAGCGCAAAGCACAGAAGTAGCTGTGATCATTGCCATCATCCATAATAGGCAAACCCTTGGATTCAAAGATCTGTATGATAACATAATATCTTGATTCCGTAGAATTGGACAGTACACTTAGTTTATCAGAAAACCTGGGAGGTGGCATAAACAATGAGACTTGATTCTCATGCTGTAGCAGCTCAATAATGTCTTCATTGTCTTCAAGTTTCTTAACATAAATATCACATCCTAATTTGTTCTCAAAAACTATTCTCTGAAAATCATCTTCATCCAAAGCAGAGCAGGACAAATCATCAGCATTTTTCACACTGTCAACTGTATCCTCATTCTTTATTGATGATTTTTTTTCCAGATCGATTTGTCTTTTCCATGAAATTAAAGTTTCTATAAGCAAATCAAGATTTGCAGAACTCAGGTTGACATTTAGAGGACTTGTGGCAGCAACACGAATCCTCTTACCGACTTTTGAAGGAGGGTGTTTACTGGTATCATATGTCTCAAACTTGAATATCCCATCAAATGGCTCAACAAAAGGTTCCCATGCTTCCAGGTGTCTATTGAATGTTGATGCAGAAATCGAACAGATCAATACAGCATTCATTGTCTCAAATTTTCCATGTGTTGCAAGATTTATATTTGCGATTGTAGTGTCAAAAATTGGCGTGACCATTCCACAGGAACTGTCAAGAATGCTGACTGACAAGCATCCAAACTTCAGCTCAGCAGTAATATTTTCCCGCACCTTTGGTTTAGCATGGTCTGCTATTCTGTATGCCATTTGAGCTGGTGGTTTTTTCGTATCAGATGTTGCCAGGAAAGTGCAGCCCTGGTTTGAAACTTTCCAAATGCTCCAGCAGTTAGGTCCCTTCGAGCTAGAGGACCTGGATATAGGATCCTCTAAGATATTTGCATGATTCACCAGACCCATCTTCGGACAGCAAACGGAATCATTGCTTGGCATTTCATCTGTTTTTGTTGCAACACATCCAAGAGAAGCATATCCAGGAGGCGGCACTGGATACCAGAAGAATAATATTTCATCAGAACCCTTTCTATCAATCTGGGCTACTTTTTTAAACTGAGTAGGCCTTTCAGAAACAATTGCGCTGTCGCACTTAAAAAGAATACCAAGAGTAGGTGGTTCAAACCCTTCAGTTATACAATCACCAACTGAGGAAAACCCAAAACGAGGTATTGGCCGCCATATAGAAAATGGTCTTTTTGTATCTCCACCTTTGTCCCACCATATTCTTTCAAAGTGTGGAGTAGACATGCAATAGCTGCTTGGCCTTGACAAATTTCTAACAGCATCCCAACCAGAAGTACTCTTGCGATGAGTTAACTGATCAGCAGGCTGGTTACTCCGAACAGAAGAATCTGCATTCAAATCTTTAACAATATAGCAGTTGGGATTCCGGAGAAGAACATGGTGCAAATCAAGAGCTTCAACTCTAGTGGGTTGTTCAATAGAATTGTGTGCATGGAAGGAAGCAATCACATTGTCGACACGCCAGATGCTAAATCCAGGAGTTACTCCAGGAGTAGGTGAGAGAGTGTGGATACAATCAGAAAAAGCTGTAGAAGTCACAAGATCTGAGCGAAGGCAGTACACTACGTGATTTGAAGGTGGTTGTCTTCCAATATTGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0162900.1 | 2 | 15931840 | T | C |
| Osa02LNT0162900.1 | 2 | 15931943 | T | C |
| Osa02LNT0162900.1 | 2 | 15932804 | A | G |
| Osa02LNT0162900.1 | 2 | 15933226 | A | G |
| Osa02LNT0162900.1 | 2 | 15933353 | A | C |
| Osa02LNT0162900.1 | 2 | 15933638 | T | A |
| Osa02LNT0162900.1 | 2 | 15934155 | C | T |
| Osa02LNT0162900.1 | 2 | 15934606 | T | A |
| Osa02LNT0162900.1 | 2 | 15934671 | T | G |
| Osa02LNT0162900.1 | 2 | 15937527 | C | A |
| Osa02LNT0162900.1 | 2 | 15938675 | A | T |
| Osa02LNT0162900.1 | 2 | 15940173 | A | G |
| Osa02LNT0162900.1 | 2 | 15940692 | C | T |
| Osa02LNT0162900.1 | 2 | 15940845 | C | A |
| Osa02LNT0162900.1 | 2 | 15937930 | T | C |
| Osa02LNT0162900.1 | 2 | 15942334 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0162900.1 | osa-miR5534b | Translation | 5.0 | 23.457 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR5537 | Translation | 5.0 | 11.022 | 1 | 22 |
| Osa02LNT0162900.1 | osa-miR5537 | Cleavage | 4.5 | 19.962 | 1 | 22 |
| Osa02LNT0162900.1 | osa-miR5537 | Translation | 4.5 | 15.08 | 1 | 22 |
| Osa02LNT0162900.1 | osa-miR5544 | Translation | 4.0 | 16.306 | 1 | 22 |
| Osa02LNT0162900.1 | osa-miR812p | Translation | 4.0 | 11.918 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR812p | Translation | 5.0 | 23.236 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR5794 | Cleavage | 4.5 | 11.827 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR812r | Translation | 4.5 | 11.594 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR5828 | Translation | 5.0 | 15.849 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR2873c | Cleavage | 4.5 | 19.099 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR1440b | Cleavage | 4.0 | 6.497 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR6248 | Cleavage | 4.5 | 16.56 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR818f | Translation | 4.5 | 14.998 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR413 | Cleavage | 4.5 | 14.788 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR426 | Cleavage | 5.0 | 11.169 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR426 | Cleavage | 5.0 | 22.05 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR396e-5p | Translation | 4.0 | 18.113 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR396e-5p | Translation | 4.5 | 14.06 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR395o | Cleavage | 5.0 | 14.329 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR1426 | Translation | 4.5 | 11.845 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR1431 | Translation | 4.0 | 10.184 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR1441 | Cleavage | 4.5 | 12.117 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR1860-5p | Cleavage | 4.5 | 17.77 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR1860-5p | Translation | 5.0 | 15.084 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR1860-3p | Cleavage | 4.0 | 14.704 | 1 | 22 |
| Osa02LNT0162900.1 | osa-miR1860-3p | Cleavage | 4.5 | 19.148 | 1 | 22 |
| Osa02LNT0162900.1 | osa-miR1861e | Translation | 5.0 | 11.246 | 1 | 22 |
| Osa02LNT0162900.1 | osa-miR1861k | Translation | 5.0 | 11.246 | 1 | 22 |
| Osa02LNT0162900.1 | osa-miR1861m | Translation | 5.0 | 11.246 | 1 | 22 |
| Osa02LNT0162900.1 | osa-miR1882a | Cleavage | 4.5 | 18.791 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR1882b | Cleavage | 4.5 | 18.791 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR1882c | Cleavage | 4.5 | 18.791 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR1882d | Cleavage | 4.5 | 18.791 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR1882e-5p | Cleavage | 4.5 | 18.791 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR1882f | Cleavage | 4.5 | 18.791 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR1882g | Cleavage | 4.5 | 18.791 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR1882h | Cleavage | 4.5 | 18.791 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR2099-5p | Cleavage | 4.5 | 13.57 | 1 | 22 |
| Osa02LNT0162900.1 | osa-miR2101-3p | Cleavage | 5.0 | 19.789 | 1 | 22 |
| Osa02LNT0162900.1 | osa-miR396f-5p | Translation | 4.5 | 18.159 | 1 | 22 |
| Osa02LNT0162900.1 | osa-miR396f-5p | Cleavage | 5.0 | 12.908 | 1 | 22 |
| Osa02LNT0162900.1 | osa-miR396g | Translation | 4.0 | 18.113 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR396g | Translation | 4.5 | 14.06 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR396h | Translation | 4.0 | 18.113 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR396h | Translation | 4.5 | 14.06 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR396d | Translation | 4.0 | 18.113 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR396d | Translation | 4.5 | 14.06 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR812k | Cleavage | 4.5 | 11.913 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR812k | Cleavage | 5.0 | 23.284 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR812l | Cleavage | 4.5 | 11.913 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR812l | Cleavage | 5.0 | 23.284 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR812m | Cleavage | 4.5 | 11.913 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR812m | Cleavage | 5.0 | 23.284 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR2873b | Cleavage | 5.0 | 18.534 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR5073 | Cleavage | 5.0 | 14.818 | 1 | 23 |
| Osa02LNT0162900.1 | osa-miR5076 | Translation | 4.5 | 11.991 | 1 | 22 |
| Osa02LNT0162900.1 | osa-miR5155 | Translation | 4.0 | 15.353 | 1 | 24 |
| Osa02LNT0162900.1 | osa-miR5340 | Cleavage | 4.5 | 24.342 | 1 | 23 |
| Osa02LNT0162900.1 | osa-miR5499 | Cleavage | 5.0 | 12.446 | 1 | 21 |
| Osa02LNT0162900.1 | osa-miR2275d | Cleavage | 5.0 | 13.838 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0162900.1 | 2 | qSS-2 | Physiological trait | Sterility | RM301 | RM263 |
| Osa02LNT0162900.1 | 2 | nan | Resistance or Tolerance | Drought tolerance | RG83 | RG171 |
| Osa02LNT0162900.1 | 2 | d50 | Morphological trait | Dwarf | nan | nan |
| Osa02LNT0162900.1 | 2 | qPH-2 | Morphological trait | Dwarf | RG324 | RG83 |
| Osa02LNT0162900.1 | 2 | np2.2 | Morphological trait | Culm/leaf | RM324 | RM262 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)