© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0165500.1
GTGGTGAGGTACACGGCCATCCAATCTAGCCACCAACAACAAATATGCCTTATTTTTTTCGGCTCGAAAGCAGTCTATTATTTTCCAGGTATAATGGACCTATGCGAACAGATTTTAATCAGATGACACCGCCCATCCAAGCAGCTTTTTGATCCTAACATAAACATTTATCTATTGATAAAGCTCCAACTCTTAAATTTAGACCTAAACCCAACTCCATATCGCTAGTCTATTTTATGAGAAGGTCAGCCAGCTACACTCCTTTTTTAGATGGAGCTGAAACTATTTGGCTAAACTCCAGCTACAGGAGAGGTGGAGCTGGAGCTAAAACCGTGCCAAACATATCGCAGCCCGGATTCATTACAGTTTACTCCAACCAAACCAGTTTTTGGGCCAAAAACTAGCCTTCCAAGCAGTTCAGGAGTGCCTCGTCAAAGCATTGGTGGTAACTCTAGTACTGCCGTACTAGATCACAGATTCAGAGCCTCGCAGGAGCTATCTCAAATTATGCTAGTAATACACTTTGGCATCTTTCAGGACACTCCAAGAATGGCAGCAAATGAAAGGAAAACCTCGGCCGTAGAGTGCATTGCCTTACCTCCTTCGATGTGCTACATGACTAACAAACATCACGGTGTGCATTGCCTTTGCCTCCTTTGATGTACCTGACTACTACATGCTTGTTTGTCAACGTACTCCCTCTTTCCCCAACATACTCCTTCTGTCCCAGAAAACAAATCTAGTACAGAATGTTACACATGTTTTTGGGAGGCAGAATGTTACACATTTTAATACTCATGTCCAAATTTATGGTACTAGAATGTATCACATCATATACTAGATTTGTTTTTTATGGGACAGAGTACGTGAAAAACACTATAAAGTTTGTCAGCACTCAGCAATCGTAACTTGTATGTCCAGCTTAAACAACCAATGTAGATTTGTGGAGACACGACAACATTTTAAATCCACCTCTGTAGTTCTGACTGCATTTGTGGTGCAGCCTTGTAAGTACAGATGTTAACTCATTTGGGGCTGCTTCATGGGTCGTTGGTATCTGCTGGTGTAGGTCCCTCGAAATCTGCTCCAAACCTACAGTAGCAAATGCACTAAAAAACACCTGATTTCTACTCAGCCAAGTCCACTGCAGGTTCAGTTCTTTGGCTTCTTTGGAGGTGGTGGAGGCAATCCTCCACCCTGGGCGCTTCGTTTGATGCCCAGAAAGTGCTCGACCTTTTTGGCCCCAAGCATGGGCGTCAGACTCCCAGGGTGCTCTTTCTCCACTGTAGCAAAGCCACTGGCATCGCTCGTTTGACCTGATTTTGCATTGCCACTTAAAACAAGGTATGGTGTTTTGCTGAGAGCTTGAGCCTCTCTCATCTTCTCCGCAGACATTAATGGTGTGTCAGAAGATATCATTCGCTTGGTTTTCAACTCATCCCGATACTTTTTTTGGCGCCGTTCCTGCTTCATTTTACCAGGTGCCTTGCCATGGAATTTGTGTGAAAGATCCCGAAATGCCTCCTTCGGTGTCATCACTCGACCAAATTCATCAATTCTTTCTATGCGAATATCTTTTGGTCCATCCTCAATACCAGCAAGCTTGCTTTTCTTCTTATCTGTGGTTCTGCCTCCCCAATCTGTGCCCTCATTGAGGGTTCCTCGTTCCTTCAGAAACTTCAAAGCACCAGCCAAACCCTTGCCAACTGCAGCTTCATGTACAATCTCATCTGGTTTTAGCTCTTCTTCCTCTTCATTCTTTACTGGGACTTCAACGCTAGTTTCCTCTTTGACCACGGCCAGCCCACTCATGTCATCTTTTGCCACAGTGTCTGACATGATCATGTCATCATCTTCATCCATAAAAACATCTTCTGCTTCTGGTTTGCGAGTCTCTTCATTCAACTGTAGGCCCCACACAAACTCTTCCATCTCTGTGATAACAACCTTATTTTGTTGTGCATCTCCTTCGGCAGCATCTGCATCTTTTTGACCTATTCTTGCAGTAGCCAGTTCTGCTACAGCCAGAGGACCAGATGCAGCAGTCTCTTCCTGTTTCCTTAGAGCTAATTTCCTTGCTTGCTCCAGAGATTTCTGCAAATCTTCGTAATCTTCACCAAAAACTAGTTCTTCAGATTCAGCGTGTTTACCAGAAATATTTTTCTCCGGGCGCAATGCTTTTGATGCCTCTTCAGCCTTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0165500.1 | 2 | 18311319 | C | T |
| Osa02LNT0165500.1 | 2 | 18311366 | G | T |
| Osa02LNT0165500.1 | 2 | 18311764 | T | C |
| Osa02LNT0165500.1 | 2 | 18311821 | A | G |
| Osa02LNT0165500.1 | 2 | 18312881 | A | T |
| Osa02LNT0165500.1 | 2 | 18313561 | A | G |
| Osa02LNT0165500.1 | 2 | 18313709 | C | T |
| Osa02LNT0165500.1 | 2 | 18314168 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0165500.1 | osa-miR5788 | Translation | 5.0 | 24.663 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR5829 | Translation | 5.0 | 14.716 | 1 | 24 |
| Osa02LNT0165500.1 | osa-miR395b | Cleavage | 3.5 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395d | Cleavage | 3.5 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395e | Cleavage | 3.5 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395g | Cleavage | 3.5 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395h | Cleavage | 3.5 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395i | Cleavage | 3.5 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395j | Cleavage | 3.5 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395k | Cleavage | 3.5 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395l | Cleavage | 3.5 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395s | Cleavage | 3.5 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395c | Cleavage | 3.0 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR415 | Cleavage | 5.0 | 10.004 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395m | Cleavage | 3.5 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395n | Cleavage | 3.5 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395o | Cleavage | 3.0 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395p | Cleavage | 3.5 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395q | Cleavage | 3.5 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395v | Cleavage | 4.0 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR395r | Cleavage | 3.5 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR816 | Translation | 5.0 | 19.9 | 1 | 20 |
| Osa02LNT0165500.1 | osa-miR1424 | Translation | 4.5 | 17.983 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR1439 | Cleavage | 4.0 | 10.432 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR1874-3p | Cleavage | 5.0 | 11.52 | 1 | 24 |
| Osa02LNT0165500.1 | osa-miR1862d | Cleavage | 5.0 | 10.644 | 1 | 24 |
| Osa02LNT0165500.1 | osa-miR1862e | Cleavage | 4.5 | 10.628 | 1 | 24 |
| Osa02LNT0165500.1 | osa-miR2865 | Translation | 4.5 | 19.901 | 1 | 22 |
| Osa02LNT0165500.1 | osa-miR395y | Cleavage | 3.5 | 16.551 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR2873b | Translation | 5.0 | 19.535 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR5161 | Cleavage | 3.5 | 10.541 | 1 | 20 |
| Osa02LNT0165500.1 | osa-miR5338 | Cleavage | 4.5 | 9.122 | 1 | 21 |
| Osa02LNT0165500.1 | osa-miR816 | Cleavage | 4.5 | 23.598 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0165500.1 | 2 | np2.2 | Morphological trait | Culm/leaf | RM324 | RM262 |
| Osa02LNT0165500.1 | 2 | qSS-2 | Physiological trait | Sterility | RM301 | RM263 |
| Osa02LNT0165500.1 | 2 | 2-3SY | Physiological trait | Source activity | RG171 | RG157 |
| Osa02LNT0165500.1 | 2 | nan | Morphological trait | Root | RG171 | RG157 |
| Osa02LNT0165500.1 | 2 | qPH-2 | Morphological trait | Dwarf | RG324 | RG83 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)