© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0166500.3
AACAGAACTATATGTAACATCAATATAACACCAGAACATGGTAGAGTTACTGACAAAAATGTTTTTTACCAGGTACGCACAAAGAGTCAACATGGGGTTCAAACCCTTAATTTCAAGACATGATCTTACACGCAGGTATGAAGAAGACGAATCCCAGATAGAAACCGCTAATCTGAGGAAACTCAGCACCATAACCAGAATATAGAAGAAAAAAAAACTACCACTCGCTTGATTTGAGCAGCAAGTTCGAAACTACGAACCTTTGACCTTTACACGAATCATACACAATTCAAATGTTTCTTCAGAGACAACAGTTTCCAATCTGCAGTGCCAAGCAATTCATGCCTCAATTCAATTGCCCTGCACCACATTGTCAACATGAGTAGCAACAAGACAAGTACGGACAATGCGCCACTGATATTAGACCTTGGCTACAAATTTCCAGCAGATCCATATTTCTTACTTGTAACATGTCCAGACTATCCATCTTTCCACCTTTTCACACATCAATGGCTTTAAAATTTGCATGATGATGTGGCCCAACAGCCAAAACCATACCAACAAGACCATTAGAATGTGCATCTTCTATCAACTAAGAATCACAAATAGACGGCACCATATATTAACTGATTGCTTGAATTTCTCTTGTTCTCATGTAGGTCATGAACTGCCCTGGTATTTCAGCAAGAAGTGACTGAACTGTCGAAATCCCACTGCCATGGGCATCCTTCATTGGGGCGAACTGTATCATATCCCTTGATGCCACTCTTCCTGTTGAGCTTTCTAGTCTCTCTCCTTTATTTGGATCTAGAAACTCCATTTCCTTGAAGTCCGCTCCACCAACTCCAACAACAAGAATGGACAAAGGAAAATCAGATGCCTTTATGATTGCATCGATAGTCTCTTGGAAATCAGTCACCACACCATCCGTGACTATTAACAGAACAAAGTATTTCTGCTGGTTGTTGGCAAGTGATTGGTTTGCTATTGCCGTAGCAGTGCTAACTACTGGACCAAATAGGGTGGGCCCAGCCAATGAGACATTACGAAGCGCACTGATATAAGCTGACATAATCCCTTGTATTCCCTCAACCTCAGGTTGATAGGTGCTACCATTCAGGTTGAAACAGTGGGAAACAGGACCATCAATAGGTCTAGCACCAAAGCCCCATGAGGGAAACCGCTTAGCTGGGTCATAGTACTGTAGTACATCTCCTACTTCCAGTATTGCTCTCTGATATGCATTTGGCCGACCAGTGGGATCAATATAATGCAAGGAATCTGGAAGCCGTGGATTTCCATTTGAAGCTGTGAAGTCTACGGCTACCATAAAATTCAATTGGCACCCAGCAGAAATATAATCTAGAAAAGTCTGTCTGTTGTTCTCAAGATATTTCTCCACATACACTTGACTCTTTAGTACCTCCTTACTGTGACTATCATGAGCAGTGCTGGCAGGAACAAAGAAATTTTCACCATCCTGACTATGATACATCTTTTCCAATTCTGCGACCGATTTTACTATCTTGCCTATTAGGTCATGTTTGCCGTTGCTACTGAAGTTGAAGCACTCTATGATTAAAGGGTTCTCTTCCAATCTGTTGGAGATTCAAGATCACTGGCTTCCACTTGGGATTGAGGTCGTTCTTCCTTACTTCCGTCTTACAAATTGGAACAGGCACTCCACTCTCTGATATTCTAGATATTAGTAAAAAGGGATCACTTTTTGAGAGAAGGTCCTTGATTTCAAGATCTGAACAGCGGAATACCATCTCCATTATTGCTTTTGAACCAGCACTTTCTTCTGCCTGAACATTTAGTTCACCAAATTTACTAGGATTTGGTAGGTTATGTTCGGAAACGCCAAGCTTTAGAGTCAACAGTCTGTTTTGTTTAGTGATAACCTTTAAATTATCAAAACAACTCCAATAGTGTATAAATTTCATATATGACAAATTGAAGAGTAGGAAGAATACATGGAATCCACCTTACGTTTAAGGCCTTTTCAATGAGTTTTAAAGTTCTCCATTCCATGACAAACAGTACACAATAAGAAATCATGTGTCAACATAAGGTATTATGTATATTAAATAACCGAGAGGAATAAATGACCACAAAATTTTTTTAGCCAAAGTCAGGCATACCTCAGACAAAAGACAGACAGCCTCCCCAAGAAATTGTTGCTCTTCCAGTTTAAGCATCTTTTCATTGACATCATGAAACTGTGGATCAATGTCATATACCTGAAACACAATTGGTTGAAGAACCTCAAACTGGTAGTGCACGTTGATTCTTGCATTCCAAGATGGGTTCAAAGAATTCAATATTACTTCAGTACGCCCAAGTTCTTCAAGTGCTCCTTCTTTGCTTTTAGAATATACAATGACCATGGGATTGCTCTTGGTAAAGAATTCTTGGTCGCCCAAATTTGATGCAGAGAGAGATAACTGTTTCAACAGGTTATACAGAGTTCTTGTCAAAATAAAACACAATTAAACACACCCTCATCAGTTCGGTAATTGCATTTCTATCAGTAAATCCAAACAAGACATAAATTTATACAATGCACATGCATCATAATAGTCATCACATGAAGCAACATCACAGTATTAAATATTTGAAGTTTTTGGATTAACTACCAGGTCAGGTAGTATGAAATGACAGAAATACTTAGCCACACAACTTGCAGACTCCCAAGCGTTCAGGCACAAAATCTTACTAATAAACCACAAATACAGTAAATCATCTTTTACGCAACGTTATCAATTAGAAGAACATCAGCAGCCAACTGCTGCAGCCGTCAGAACATCAGAATGTTCAGTGCCGTGTCAAACCAAGAGCACACGGCATGCTCAGATTTCACGCCCGCTCCCAATCATCGTCGTGTAATGGTTTTTTATCCCGATCAACACGAAATCCCTCGGGTTTTTTCTCCTTTTTTTTTGTTTGTTTGTTTGCAAGGCTGAGAACAGGTAGCGGAGTAAATTAGCTGAGGCACAGACCACACGCATCCGCTAGTCCCGTCGCTGCAAGGCGCAAACCACGAGACTCACGCAGAACGGCGCGAAACTGGAGAACCGCCAGCGACGCACGCAACCGAAGCGCACCCGGCGCAATGGCACGGCCACCCACGCGCGCTCGCTCGCGAGCACCTGGCGGCGCGCTACTACTACTACTACTGCTATGGTGTGAAGCAGAATTAAACCGCATGGATGGGGCGTGAGGCGGTGTGTGCGTTGTGTGTGGGTTTTCCGCACCTCGACCTGCGTGGACGCGCCGGCGCCGCGGGAGCGGAGGAAGCGGTCGGCCGCGGCGGACGCGGCCTCCGCCGCCGCCGCAGCCGCGGCCGCCGCGGGGCCGACGGAGTGGCGGCCCGCGTGGCCGCCGCCGCCGCCCATCTCGTCGGAGCAGCAGTTCCCCATGGCTAGTGGCTCTCCTCGCCGTCGAGCAGGAGGGGGAGGAGGCGAGCGAGATCTACCGCCGACGCATCGATCTGGAGGTGGGAGGAAGAGGGAGAGCGAGAGCGAGAGGAGAGCAAGTGGAGTCGTGGAGACGACACGGAGACTTTGGACCCCTCAAACACTAGGCGAGGCCGAGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0166500.3 | 2 | 18996793 | C | T |
| Osa02LNT0166500.3 | 2 | 18995787 | C | A |
| Osa02LNT0166500.3 | 2 | 18997823 | A | C |
| Osa02LNT0166500.3 | 2 | 18999326 | A | G |
| Osa02LNT0166500.3 | 2 | 18999462 | C | T |
| Osa02LNT0166500.3 | 2 | 18996671 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0166500.3 | osa-miR5534a | Cleavage | 4.5 | 10.733 | 1 | 21 |
| Osa02LNT0166500.3 | osa-miR5797 | Cleavage | 5.0 | 15.3 | 1 | 21 |
| Osa02LNT0166500.3 | osa-miR169f.2 | Cleavage | 4.0 | 13.391 | 1 | 21 |
| Osa02LNT0166500.3 | osa-miR171e-5p | Translation | 4.0 | 16.942 | 1 | 21 |
| Osa02LNT0166500.3 | osa-miR415 | Cleavage | 4.5 | 14.014 | 1 | 21 |
| Osa02LNT0166500.3 | osa-miR435 | Cleavage | 3.0 | 10.036 | 1 | 20 |
| Osa02LNT0166500.3 | osa-miR444b.1 | Translation | 5.0 | 13.622 | 1 | 21 |
| Osa02LNT0166500.3 | osa-miR444c.1 | Translation | 5.0 | 13.622 | 1 | 21 |
| Osa02LNT0166500.3 | osa-miR1856 | Translation | 5.0 | 15.344 | 1 | 21 |
| Osa02LNT0166500.3 | osa-miR1428e-3p | Translation | 4.5 | 15.372 | 1 | 21 |
| Osa02LNT0166500.3 | osa-miR1865-5p | Translation | 4.5 | 21.275 | 1 | 24 |
| Osa02LNT0166500.3 | osa-miR1882e-3p | Cleavage | 4.5 | 13.65 | 1 | 24 |
| Osa02LNT0166500.3 | osa-miR2055 | Translation | 4.5 | 16.193 | 1 | 21 |
| Osa02LNT0166500.3 | osa-miR2093-5p | Cleavage | 5.0 | 11.475 | 1 | 20 |
| Osa02LNT0166500.3 | osa-miR2918 | Translation | 4.0 | 17.537 | 1 | 21 |
| Osa02LNT0166500.3 | osa-miR2918 | Cleavage | 5.0 | 21.214 | 1 | 21 |
| Osa02LNT0166500.3 | osa-miR2923 | Translation | 5.0 | 12.756 | 1 | 22 |
| Osa02LNT0166500.3 | osa-miR5154 | Cleavage | 5.0 | 19.336 | 1 | 24 |
| Osa02LNT0166500.3 | osa-miR5484 | Translation | 5.0 | 13.615 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0166500.3 | 2 | qPH-2 | Morphological trait | Dwarf | RG324 | RG83 |
| Osa02LNT0166500.3 | 2 | nan | Morphological trait | Root | RG171 | RG157 |
| Osa02LNT0166500.3 | 2 | np2.2 | Morphological trait | Culm/leaf | RM324 | RM262 |
| Osa02LNT0166500.3 | 2 | qSS-2 | Physiological trait | Sterility | RM301 | RM263 |
| Osa02LNT0166500.3 | 2 | 2-3SY | Physiological trait | Source activity | RG171 | RG157 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)