© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0167200.1
GAAAAGTAAGTGATAACTGATAACCCCGACATCCCATTACGATTCACATAACAAATATGTACAAACTTTTGACACTGCGACAACGGGTTCTTTCAGCCTACAGAGCGTGGCTGCGCTGCACACCCGCACGGCAAACGACGAAGAGAAGAGAACAAGGCAAAGCCCAAAACGGGACACGGGCTGCCACCGTCGAACACACCAGCCACCACCGTCGCTGCCGGGCTCCAGCAAGTACACAGCCCAAAATGGGACACGGGCCCAAAATGCATTCGCTACCATTACTCTAAGCTAAAAAGCTGCAGAACGGCAGATGGCCGCCACCGGCCTCGGTCGGGTGACCGGCCGGCGATCGATCACTCGTCCGGCACCACCTCCATGTTCTGCTCCTCGTACTTCACGCCCACGAGGAACGCGATGCTCACCTGCTTGGGGTCGTACACGGCGTACTCGTTGTACTCGAGCGGGCCGTCCTTGTTCGTGGACGGCACCAGCTTGCCGCACGGCACCGTGACGCCGTCCCTCCAGGTGAAGTGCTCCGACGGGTCGGTCGTCTTCCTCCCGACTCCCTTCACGCCCATCTTCTTCTCCTCCATGCGTTTCACGTCCTCTGAGCCTGGCGTGCCTGTTATCTCCTGGATCTCTTTCCCCAGAGATGCCACCGCCAGGACCAGGTAACCCTCCGGACGATCCACCGCCGTGAAGCCGTAGAGCGCGGCTTCGGCTGCTGCGTCTGAGCAAACTATGGCTTTGCCAAACATGTATCCCGGCACTGGTATATGGCAGACAGCAGGCACGAAACCATCGCGCAGGTGCCTGAGCAAATTTGAACTTCTTGTTCCACACCAGAGGAGAACTTTGTTCGGAAGTTTCTTTATTTCATCATAAGAAGGAAGAGCACTCGATTCAACAGCATATATCCGCTCGACAGTAGCACTGTAAACCACATCGCCAACCTTGACAGGCTCGTAGGTTTTCTCCAGATACTTCAGGATCATCTTATAGTCCTCCGAGTCTTCAACAACACGATTGATAGAACAGCCTAGTTTCTTGTAGCATTGAGACAGTGGGTCATCTAAAGTTGAACCAAACACATCACCAATAAGACGAGAAGCGACATTTATATCACGAACAGTCTCCAAACCAGAAGCCACATTGTCAGCAATCTGTTCATATCCCTTCATTGTATATGGACGAGTTGTGGGGAATAGGGTGAACCACTTATTGCTGATCTCCATCCAGAATGCGTCAGCAGCAGGCCCAGACTCTGGAGCAGACTCGACATCTTGTTTCCACTCTAGTAGCGTCTCCTCCCCTCTTTTCAGATGGAGATCTGTAAGCATCCCGATAGGAAGGTCTGGCACATCATGGCCCATCTCTGTCAAAGCATACCTGTATATTTCTTGGCTGCATAGTTGTTTCATGATAAAAGTAACAGAAGGGTCAAGCTTGCAGTGTGCTGCAGCAGCTCCCAACTGACGAAGAGCCACACCACCATGGCGCACGTCAACACCATCATCCATGTCCAAGGGATACATCTTCATACACTTCTTCTTAAATTTCTTCTCTCTCTCCCATGGTTCAAACTCATTTCCAGTAACCTCCTCAAAAAGACGGACAAATTCCTTGATAGCATCATTGAAACGACTACCAAAATCTTCAACCCGTTCCTCTGCCATCTGGTCATGTCCAATAGGACCCTTCTTGTAGTATAGGTGCAAATGGTTCTCAGGCACCATGATCAGCTGCATAATGCATAACTGGTTAATATCGCCTCCTAAATCGCACACAGAAAAGGCACAATTGTAGATGATGCCATCCTTCTCATAGATATGTCCTCCGTCTTTCTCCAGTTTAGAATCTTTGTGCACTGCTCTTTTGCCTGCAAGTTTAAGCTCTGCAGCCAAGGTCTCGATAGCCTCCTCAGTTGGATCAAGGTTGCCCAGCGGCAGCCCTCGGCCTTCTGGAACAACATCAGATGCAATATCATAAGCAGCCAAAGGTTGCTTTTCCTTCTTCTGGACGCTATCAATTATCCAATTCTCACTCACAACAGGAGTTCCACGCTCCAGTGCTTCGGCAAATCCTCCAGAGCCACCTTGATGTCTCTCAGCTGGGGAAGCCACTACACAAGTGACACCAATCACGGAGTTGTTGACTTTCCCTCCATGCTTCATAATCTGCTCCTTGAAATAACCATGTGAGCGTGACATCCTTCCAGACAATGCAATCATCATGCCCGAGAAGATACCCTCGTCATCCAAATTACGTTTAGGGTACTTATTCCCTTCTTGTTGCTTCAGCCACTTGCGCACGAAATCATTCTTGACATCATCAGGGACCTTTATAGGACCACCTCTCCTCGAAGGATTGTTAGTACTGAAGCTACAACATGCCCACTCACTGTGAGTCCCAGTGCAATTGTATTTCAATCCCTTACACTCGAGCTGACCACCGCATACGGGGCACTTGTCAAGAGGCCCATAAAACATCACATCCTCACATCTTGGGACAACTGCATCTTCTGATCCAGATGCATCCTGTTCATTGCCTTGGAGGATCTTGCGCATGTCCTCGATCGTGAGGTGTTCCCTTATGGCCTTGCAGAATTCAGAGAACTCCTTCACGGCTGTTGCCTTCCCATTCAGGTCAGATTCCTCCGCTTTGAGCTTCTTGTTCTTTGATGGCTCCTGCTCCCCGTCGTGCTCTTCATTGTCGGCTGTCTTCTTGTTCTTGGAGGGCGCTTGCTGGCCACCTTCCTGCTCTTTGCTTTCTGTCTTCTGCTTCTTCGGAGCAGCCTTCCCTTCTTCTTGGGAAGCCGCTAGTGTGCGTGATCTTGTCTCGTGTACCTGAAAAGATAATAACAGTTCAAAATGAGATTCGCACAAACAATTGGAAAGTGATTATTTTGAAAATAACCACTTTCCAATTGTTAAAACTGGAGACGACTTGGGGTTGGGGGTCTCCCTCATGATTGGAAAAACAGATGTCTTAACTCCTAATTCCTGAAGGCTAAAGCTTTAGTGAAGTTGATTCCAACACATATGAATCTACTTATTCAGAATCGTTGAACTAGCAACTAATAAACTAGTTACCCAACAAAACTACTGAATCTTAGATAATCTTTACCATCAATTGGCGAACCTGATTAGCAAGCTGCAAGCAAAGCACACTACTAATACTCAATAATCTCAGAGAAAACAAAGAGCTACTACTAGTCTACTACAAATTGAACACTCACAAAGGTTAAGGGCCAACCAAGAAACAATCCGTCCACACAAACAACTGCAAACTATAAGATCAAAGCTGCTATGAATAATGGATTAAAAGTTTAAAGAAAAAGATGGAGGCGGCAATGCAAAGAGCAGAGGAGGCACAAGTACAACAGCGCAGACCATGATGACGCGTGGGCGAGGAACAGGAGGGAGCGGCGACGAGCATCAGGGATCTCGAACCATCTCTCCACCCCCCTCCGCGGTTAAATATAAACGGGCTGGCTCGCTACGCTCGGTGGCGACTGGCGGAGTGGGTGTCGCCGCGGCCGCGCTCCAGGTGTTTGCCCTCCTCCGCCTGCCTGCCGCCGCGGCGACACGTAGCCCACCCACGCCCCCATGCGGACGCGGAGACGCTGGCACGCGCGCGCCGCTCTCTCGGGCTCCGCGAACCGTGGGGGTGGGACTGGGAGGGAGACGCGAGACGTGGGGGTGCGGAGATGCGGTGGAAATG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0167200.1 | 2 | 19512204 | T | C |
| Osa02LNT0167200.1 | 2 | 19509942 | A | G |
| Osa02LNT0167200.1 | 2 | 19511255 | G | A |
| Osa02LNT0167200.1 | 2 | 19512061 | G | A |
| Osa02LNT0167200.1 | 2 | 19512591 | T | C |
| Osa02LNT0167200.1 | 2 | 19512732 | T | C |
| Osa02LNT0167200.1 | 2 | 19512745 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0167200.1 | osa-miR7693-3p | Translation | 4.5 | 16.567 | 1 | 22 |
| Osa02LNT0167200.1 | osa-miR395b | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395b | Translation | 5.0 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395b | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395d | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395d | Translation | 5.0 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395d | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395e | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395e | Translation | 5.0 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395e | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395g | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395g | Translation | 5.0 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395g | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395h | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395h | Translation | 5.0 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395h | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395i | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395i | Translation | 5.0 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395i | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395j | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395j | Translation | 5.0 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395j | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395k | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395k | Translation | 5.0 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395k | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395l | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395l | Translation | 5.0 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395l | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395s | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395s | Translation | 5.0 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395s | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395t | Cleavage | 3.5 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395t | Translation | 5.0 | 14.461 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395t | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395c | Cleavage | 3.5 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395c | Translation | 4.5 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395c | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395a | Translation | 4.5 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395a | Translation | 5.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395u | Cleavage | 4.5 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395u | Translation | 3.5 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395u | Translation | 5.0 | 14.461 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR164e | Cleavage | 5.0 | 17.801 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR166i-5p | Cleavage | 4.5 | 18.353 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395m | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395m | Translation | 5.0 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395m | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395n | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395n | Translation | 5.0 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395n | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395o | Cleavage | 3.5 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395p | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395p | Translation | 5.0 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395p | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395q | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395q | Translation | 5.0 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395q | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395v | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395r | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395r | Translation | 5.0 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395r | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR1431 | Cleavage | 5.0 | 23.793 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR1847.1 | Cleavage | 5.0 | 7.751 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR1875 | Translation | 5.0 | 16.585 | 1 | 24 |
| Osa02LNT0167200.1 | osa-miR2877 | Cleavage | 3.5 | 15.401 | 1 | 24 |
| Osa02LNT0167200.1 | osa-miR1863c | Translation | 5.0 | 16.251 | 1 | 24 |
| Osa02LNT0167200.1 | osa-miR395x | Cleavage | 4.5 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395x | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395x | Translation | 4.5 | 21.778 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395x | Translation | 4.5 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395y | Cleavage | 4.0 | 15.506 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395y | Translation | 5.0 | 11.469 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR395y | Cleavage | 4.5 | 16.386 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR5081 | Translation | 4.5 | 7.939 | 1 | 22 |
| Osa02LNT0167200.1 | osa-miR5148a | Translation | 4.0 | 14.882 | 1 | 24 |
| Osa02LNT0167200.1 | osa-miR5148b | Translation | 4.0 | 14.882 | 1 | 24 |
| Osa02LNT0167200.1 | osa-miR5148c | Translation | 4.0 | 14.882 | 1 | 24 |
| Osa02LNT0167200.1 | osa-miR5161 | Cleavage | 3.5 | 22.427 | 1 | 20 |
| Osa02LNT0167200.1 | osa-miR5339 | Cleavage | 4.5 | 14.515 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR5488 | Translation | 5.0 | 17.549 | 1 | 21 |
| Osa02LNT0167200.1 | osa-miR167h-3p | Translation | 4.0 | 17.783 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0167200.1 | 2 | 2-3SY | Physiological trait | Source activity | RG171 | RG157 |
| Osa02LNT0167200.1 | 2 | qSS-2 | Physiological trait | Sterility | RM301 | RM263 |
| Osa02LNT0167200.1 | 2 | nan | Morphological trait | Root | RG171 | RG157 |
| Osa02LNT0167200.1 | 2 | qPH-2 | Morphological trait | Dwarf | RG324 | RG83 |
| Osa02LNT0167200.1 | 2 | np2.2 | Morphological trait | Culm/leaf | RM324 | RM262 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)