>Osa02LNT0167400.1

ACTCAGAGCAATCTCTCATTATCCACCATTATTTATGTAGTTTCAACTGAACATTCACACAAGTTCGAAAAAGACATCTGGAATTTACACTGGCATATATGATGCGTCACAACACAAGCAGGTACATTTCCCTTTTACAGAGTAGCTCCTACTAATTCACATCAGTAAAATAAACACACCCCAGGGGCATGCTGTTATTTATTTCTTGACTCCTTTCCCACTGTACAGAAAAAAACTTTAAAAGAGTACTTAGCTACTAGTATCTGCGAATCAACATATCAGAAGCATTCAAACAGAACACCAGCACCGGATCGTGTGATTGATCATCAGTTTCACTGTCACCCAGCGGATCAGGTTGGGCGAGCTTCCCCGCCCTTATCCCCTTTGGCGGCGGCCGCCCTCTTCGCTGCATCGGCCTTGTCCTTGTCCGCCTTCCTCCTCTCCTTCTCCAGCTTCTCCCTCTCCATCTTCTGTATGTAGACGCTCTCGGCGGCGCGCTCCTCCTCGCTGAGCACCCTGCCGGTGCCGTCGCTGAAGTAGCGCGCCACGCGCCGGCCTCCCTCCATCCTCCTCGCCAAAACTGCCGCCGCCCACGCGGGTTGATGAGGCGCCACCACCCTCGCCACGGCCGTTCTTGTAGCCATCTTCTTCTTGCTCCCCAAGAACGTCTTCTTCTTCCTCTTCTTGCTCCCCAAGAGTAGAGTACGACGACGACGCGTGGATGATGACTCGCGAATCGCGATCCCTCTCGGGAGCTT

Explanation	CPC Score
noncoding	-1.00109

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0167400.1	2	19649272	G	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0167400.1	osa-miR169f.2	Translation	4.5	20.182	1	21
Osa02LNT0167400.1	osa-miR1858a	Translation	4.0	20.949	1	21
Osa02LNT0167400.1	osa-miR1858a	Translation	4.5	16.108	1	21
Osa02LNT0167400.1	osa-miR1858b	Translation	4.0	20.949	1	21
Osa02LNT0167400.1	osa-miR1858b	Translation	4.5	16.108	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0167400.1	2	qPH-2	Morphological trait	Dwarf	RG324	RG83
Osa02LNT0167400.1	2	nan	Morphological trait	Root	RG171	RG157
Osa02LNT0167400.1	2	np2.2	Morphological trait	Culm/leaf	RM324	RM262
Osa02LNT0167400.1	2	qSS-2	Physiological trait	Sterility	RM301	RM263
Osa02LNT0167400.1	2	2-3SY	Physiological trait	Source activity	RG171	RG157

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus