© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0168200.1
GGATCTGAAATTTTGTATGAACCATCACCATTATTTCTGTCTGAATACAGAGATTAGACCATTTACCCATCTATAACCTGACATCTTTATACGCTCTTAATGAGCATCTAAAATACAGATCGCCACGACATGGTACATCAGCAGAAGCCTTATTTCTTCGTTTTACAAGGCCGGCAGGTTGTGCTTGGAGACCCCTCGGCCTCTACTTGGGGCTCAGTGGTTACTCTGACTGATGTCTCTTCGTTTTCTTCAGCTTGATGCGTTGGACCCTCACTACCTTGTTGCAATGTCTGATCCTCCTGTCGCGTGTTCTCGTCAATGCGGCCCTCCTGATACTGTACATCCAAAGAGCTGTTCTCTTCAACGGTCTGTGCTTCCAAATCCACTGGATCAATGCTGGCGGTTTTGGGGGATGGAAGGAGGGATACTCGACAAAGAGGGCAAGTGGTGTTTGTCGAGAGCCAGTGGTCGATGCAATCGATGTGGAAGGTATGGCCACAAGGAGGTATTCTCTGGAGCCGCTCATCCGGTTGATAGTCTGCTAAGCAGACAGAGCATCTGTCAAGAATGATTGTATGTTCAGAACAAAAGAACCAATTCAGGGTAAAATGCCAGTACTCAGAAGACAGAAAACAACTATTCTAGTTTAACCAACACACAATCTTAACTCAGCTATGCTATGGACATATATTCCAGTTGACAAATGTGAAATAAGAAAGTCTCAACGAAAGCCTTTAAGCCATATGGTAATTGCAAATAATATACTATCTACCGTGTTAAAGGTACCATGCCAATTGTAGTGGTTTGCTACTGATCCATAGTTTCTCTGAGCAACAGAGAAAACAATTCTACACACTGATCAAATACCACAATAAGGGTCAAACATTTGAGTAAATTATCTGTACAAAATTCAACATTATTCTGGAACAGACTAACTCTGAGTGACCTACAGGTTGCTCCATATGCATAAGATCCGTAGGATGACTCGCATGTGATTTTCTGTATTCAAGTGCTTTCTTCTTTCTGTCCTTTCCTCCAGACTAATTCTAGTTATTTACCAAATTTGAAAACCGTGATTGTTAAAAAATATTAGCACTTGGGCTGGATCTTGCCTTCCTGTAATTCATGTACAATTCTTTGGTATTTTGGGGATGAGGGTTGGGGGTAATATTGGAAACCTTACTAATGTATGTTCTTTCAGTTTTTTTTTTTGAGTGCATATTAGCCCATGTGAACCTCTGAAAGTCTGAATCAACAGGCGATTTTGATGTACATTCAATAAGTTGCAATACATATGTTACCGTGTCCAACCAGTGCACTGTTTATGCATATCCATTATGATATGACCATATAACCACATAACTATTGACAAAATAAAATCCTTGGCAATAATTCGGCAAATGATAATATGCAAAAGAATTTCACCTAAGCTCACGAATACTCTATGGCATCTCTTCTAAAGAAAGTCCATCAGAACTTTATTCAAGCCTAATTTTACACATTACTAGGATTTTACACATTGTTATGGAAAGCTGGAAGCAATACACCCATCAATTAAGCTTACCGACCTTGCACCAATTTTGAAGAATTTCCAAATATTGGAGTATTTGAATAACTTTGTTTTGTCCAATATATTTTCTAACTGCGCAAGTGGCACACATCCACTATAACGTTAGCAATTAACTAACTGCATATATGGTTCAGGGCCTCAGGGCATTGATATGCTTGCTATTGCCCTTCGGAAACATTCTCTAAATGTAGCTCAAGGCTCTAATTTAGAAGCACTTCCATTCATTACTGAACTAATTATTGAGATATTGGTGGTCCAGACCCAACGGAAAACCTACATCGAAGTGCTTTCATGATTTTGGAGCAATAAAAGGTGCAACACATATTAATGGAAGTGGTTATCAATTGAGAAAGATTTATGGTCTAGCACAACAGTATATGAACTGCATTGAAGAGAGATTAGGAGTAGATCACTGACTGTGTTTCCCTGATCAAGAAGCTCTCCTTGAAGACCACAACAGGCAACATTTCCCGCATCTCCTTCTTTATGCCGCACTCCAATCTGGGGTTATCTCCCCGTATCAAGTTATTAGTCCTCATGCGCAAGGACTGCCAGTTTGCTCTGCGCCGTCGCAAGTAGAACAAGTAGAAGAAGAGAAGCAAGACGAACGTGAAGAAAACCGGCACGGAGAAGATGAAGGCTTGGTATAGCTTAAGCTCAGGCGATGCGGCCGAGCAGTAATCGGGCGGGTCTGGGGAGGTACAAGACATCACCAAACAAGAACCTCCCTCCCTTCCACCAAGAACCAACGAATGGTCGACCGAATTATCGAAAACCCTAAACACTCACAAGATCTCTTATCTATAACACTGATGAGCTATAGTGCTTATTACCAAATTGCATGGGCTTAACCACCGCACCTTGATTCCCTATGATTGAATTACAAAATGCATTGCAAGAATTAAGTGATTGATGACCGCTTGCGAAGAGATGGACCTTAGATACTACTACTACTTTGATAGTGATGTGCACGCCACCAAACAAAAAATGAGCAAACTGCTATGGGAGGTAGAGTAGGGGGAAAGTGCAGCTTCTTTGTTTGGGTTTGGTTTCCCTAAGTCAAAGATAGCTGAAAACTAAAACTCAATTCAATAGCGCCAATCGAAAGCAAAACGGGGATTCAGGATTTCATGGTCAACCACGCGAGAATAAGCAGCAAGCAGCAGCAGCCTCCTCCAAGCTAGTACAACAACAACAACAACAAACACACGACAACACGAGCCCTAGTCTCCCTACACGTAATGGTGGTAAAACCACACCAAATTCCCCGCGAAGATCATGTGTGGGTGGACCGAGGGAGAGAGATCCCAGCCGCTAGGATCCACAATTCCACAGCGGTGTGCAAGAACCCTAACCCCCCGCACCGCAACCGAAACAGCGAGGTAAGGGCAACAGCTATAATATCACACGCGACGGGGATTCCAGCACAAAGTCAGATCGCGCGATCCGGAGGCCGCCGGCCGGAGCGCCGGGGGGGGGGGGGGGGGGCTACCACCACGCCGGCGGAGAGGAGTTCCGTGGCGGGGGTCAGGGCAAGAGCAGAGAGGAGGGGGTTTTGGGAATGCGCGGCGGCGGCGGCCGGATCGGGGCGGGCGGTAGGGACGGAGTTGGGCTCGCGCCGAGGAGTGTGCAGCAGCAGCAGCAAATGATGGGAAAAAAAGAAGCGGCTTTCACACGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0168200.1 | 2 | 21106347 | A | G |
| Osa02LNT0168200.1 | 2 | 21106371 | T | C |
| Osa02LNT0168200.1 | 2 | 21106775 | A | G |
| Osa02LNT0168200.1 | 2 | 21106412 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0168200.1 | osa-miR5831 | Translation | 5.0 | 6.478 | 1 | 24 |
| Osa02LNT0168200.1 | osa-miR156a | Translation | 4.5 | 12.323 | 1 | 20 |
| Osa02LNT0168200.1 | osa-miR156b-5p | Translation | 4.5 | 12.323 | 1 | 20 |
| Osa02LNT0168200.1 | osa-miR156c-5p | Translation | 4.5 | 12.323 | 1 | 20 |
| Osa02LNT0168200.1 | osa-miR156d | Translation | 4.5 | 12.323 | 1 | 20 |
| Osa02LNT0168200.1 | osa-miR156e | Translation | 4.5 | 12.323 | 1 | 20 |
| Osa02LNT0168200.1 | osa-miR156f-5p | Translation | 4.5 | 12.323 | 1 | 20 |
| Osa02LNT0168200.1 | osa-miR156g-5p | Translation | 4.5 | 12.323 | 1 | 20 |
| Osa02LNT0168200.1 | osa-miR156h-5p | Translation | 4.5 | 12.323 | 1 | 20 |
| Osa02LNT0168200.1 | osa-miR156i | Translation | 4.5 | 12.323 | 1 | 20 |
| Osa02LNT0168200.1 | osa-miR156j-5p | Translation | 4.5 | 12.323 | 1 | 20 |
| Osa02LNT0168200.1 | osa-miR167a-5p | Cleavage | 4.0 | 24.219 | 1 | 21 |
| Osa02LNT0168200.1 | osa-miR167b | Cleavage | 4.0 | 24.219 | 1 | 21 |
| Osa02LNT0168200.1 | osa-miR167c-5p | Cleavage | 4.0 | 24.219 | 1 | 21 |
| Osa02LNT0168200.1 | osa-miR156k | Translation | 3.5 | 12.323 | 1 | 21 |
| Osa02LNT0168200.1 | osa-miR156l-5p | Translation | 4.5 | 12.323 | 1 | 21 |
| Osa02LNT0168200.1 | osa-miR167d-5p | Cleavage | 4.0 | 24.219 | 1 | 21 |
| Osa02LNT0168200.1 | osa-miR167e-5p | Cleavage | 4.0 | 24.219 | 1 | 21 |
| Osa02LNT0168200.1 | osa-miR167f | Cleavage | 4.0 | 24.219 | 1 | 21 |
| Osa02LNT0168200.1 | osa-miR167g | Cleavage | 4.0 | 24.219 | 1 | 21 |
| Osa02LNT0168200.1 | osa-miR167h-5p | Cleavage | 4.0 | 24.219 | 1 | 21 |
| Osa02LNT0168200.1 | osa-miR167i-5p | Cleavage | 4.0 | 24.219 | 1 | 21 |
| Osa02LNT0168200.1 | osa-miR169i-5p.2 | Translation | 4.5 | 17.416 | 1 | 22 |
| Osa02LNT0168200.1 | osa-miR167j | Cleavage | 4.0 | 24.219 | 1 | 21 |
| Osa02LNT0168200.1 | osa-miR1426 | Translation | 5.0 | 8.659 | 1 | 21 |
| Osa02LNT0168200.1 | osa-miR2097-3p | Cleavage | 5.0 | 14.423 | 1 | 22 |
| Osa02LNT0168200.1 | osa-miR5524 | Cleavage | 4.0 | 11.338 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0168200.1 | 2 | qPH-2 | Morphological trait | Dwarf | RG324 | RG83 |
| Osa02LNT0168200.1 | 2 | nan | Resistance or Tolerance | Insect resistance | RG157 | RZ318 |
| Osa02LNT0168200.1 | 2 | np2.2 | Morphological trait | Culm/leaf | RM324 | RM262 |
| Osa02LNT0168200.1 | 2 | qSS-2 | Physiological trait | Sterility | RM301 | RM263 |
| Osa02LNT0168200.1 | 2 | qRTH-2 | Morphological trait | Root | RM262 | RM341 |
| Osa02LNT0168200.1 | 2 | qSTA-2 | Morphological trait | Root | RM262 | RM341 |
| Osa02LNT0168200.1 | 2 | nan | Resistance or Tolerance | Drought tolerance | RG157 | RZ318 |
| Osa02LNT0168200.1 | 2 | qRTT2-1 | Resistance or Tolerance | Drought tolerance | RG157 | RZ318 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)