© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0175800.3
GCTGAATAGTTGAATCAATTAGACGATTGAAACAACCTCTTCCACACTTCAAAACCTGTCTTATCTCCACAGGGGTTAAAAACAAAAAAGAAAAAAAAAAGCGAACAAAGAATCAAGAAATAATAGATGTAGCAGGTACAGTAGGCAAGCACCAACACCTCCCCTCCAACCTCACACTATGGAAACTACTAATTTTTTACAGAATACAACTCACACTTCAAGATCAGCTTCAGGGCAACAGAGGCAAGGGAAGTTTGATATTCTCCCTACCACAGATTTTCGTCGGTTTGTTTGTTTACGCGTTCTCAGCTGCTGCATGCGATCGCTTTGGTCGCCACTCTGTGTGTGCCTTCACAATGTCAGCCTTCACAAGATGGTCGCACTGGATGGCAGAAGCCTGCTTGTCGGCGCCAATGCTGGTGCATTCCCCTGACACGGTGGTAAGTGATTGCAGCACGCTGTCTCGGCCACACTCCTTCCTGTAATCCAGGGTCATGCTTGCAAGCTCATGCTTCTCCAGTACTGAAATTGGAGCACTCTCAAGGATCCACCCAATATATTTAACATTGTTCACATGCTGATTGACATCGAGGTCACCCCATCTAGGAGTGAGCCCCTTTCTTATGAATTGCTCTGTAGCATCATCACCAACTTTATTTCCTGTCTAGGCTAACTTTTCACTCTGCTCCTCTGTTATAGCTGAACGGTCATTGAAATATGGGCCTATTTCAGCTCTAACTTCATCTGGCATTTTTGAAAGTCTTCTAGTTTTCTTGTGCATCATCACCCAAACACTTGTAGCTCTCAAGATTGTTCGGCCAGAGTTGTAGTCACGAACATGCCAGTCTCGACGCATGCCATTTTTGCCAGCAGCAGCGACCCATGTGTCAACTTGAACCATATCTCCCCATGCGGGGTATTGCTCAACAAGAAGCTGGATTTTGCTGACAACCCATATCAAGTTCCGTTTGCTCATCTCCGGTGTAGCCCCAAAACCATCTCCAAGAAGACCAGCAGTCCTTACATGGTTAAGAGCCGTTTCCTGTAAATGATTCATCAATGTCTCTATAGAAGCTGTACGATCAGCGCCAATCTCGTAGGACCGAATCATGAAGTTCTGCCTAAACACCATACCGTCCTGGATGATCCTACCAAAGCCAAATGTGTCAACAAGCATGTCAGGTTTCTTCGGCTTCCAATCAAGCAGTGTCCACTGCTTCTCTGCGGCGAGGAAGATGGTTGTAATAGCCGCAAGAAGCATGCTCCAATCCGGCAGTTGGTTATAGAACGTCTTTGGAGCACTGTGAGGCACCGTTTCCTCCATGTCAGGCTTCACCGTCTTGAGGTTAACCTTCGTACCATTAACCTTGGGAAGGGTTTGAGCCTGTGCCTTTACTTGCATGGCTGCAGGAGGTGGGTTAGGCTTTGCGACAATGCCACAGACACTCAAATTCTCCGGCAATTCGCCGGTAACAGCAGCATTCTTGGAGCTTCTAGCTGATGCTGCAGGAGATGAGCCTGGACCTGGGAAGAATGCTGAGGCGGCAAGAGACCCTGCCATGATTGAACTTCCCCTCACGGCCCAAAATTCGTTTAGAAATCAATCACACGCCAAAAGCGCTAACCAGGATCCCCTCCCCTGCTCTGCTCTCCTTGGCGATGGAGATCGGCGCCCCTCCCCTCCGGTGTTGAGCCGCGGCTCGTCTTTCTTGGCGCAAGGAAGGAGACGACGGGAGATTTTCTCTTTTCTTTCATTTACGCCAAAAAAAAGGAAGGGGAAGATACTCTCCGCCTTTTATCTCTAACATTTTTTTTCTTTATTATTGGCTGGTGGCCCACGTATCAGCAATACTAAGAGAAAAAAATAAATATTTCGATTAGAGATTGTGTCAGACTACCAGAAACCACTTTTATTTTAGCCAAAAAAAAAGAGAAGGAGAAGATACCCCCACCTTTTATCTCAACATTTTTTTTCTTTACGATTGATTGGTGGCCCACGCATCAGCAATACTAATAAGAGGAAATAAATTATTATTATTATCAAACTTGATTAGGGATTGTGTCAGACCACCAGCAACCACTAACTTTAGTGTTGTTACACGCACGGCCGCCACCGACGCTTTTTTTTTTCGAGTCAAAAAGGGAAGGAAGGGGAAGATACTCCACCTTTTATCTCAACATTTTTCTTTATGATTGGCTGGTGGCCCACGGATCAGCAATACTAAGTGAAAAAAAATAAATATTTCGATTAGGGATTGTGTGAGACCATCAGCAACCACTAACTTTAGTGTCGCTCCACGCACCACTGCCACCGACGCTCTTTCTTTTTGAGCCACCATCGTTCCTTCTCTCCGCCTTTGTATGCGCAGCCGCGCCCTTTGGTTATCGACGTGTCTTTTCTCCTACACCATTGTCATGCATATTATTGTCATGGTTGCCATTGAGGTTGAGGCTGTCGAGCTTGCAGCGTGGTTTTTTTCAAAAAAAAATGCATGACCATCCAGACCTAGTAGAGCTAGCAGGTCTAACCTCTCAAGTTGATTCCTTTTCCATGTTTCGTGTATGCAATGCCTCCACACACTGGTAGGGGTGCATGTGTCCAAATATTTGATGTGAGGTTTTGGCTAAAATTTTTTGGGATCTAAACAAGACCTACATGTACACGATCAATGACTAGAACCCAAGTCACAGGCTTTACTAGTTTATTATTTGTCTGCTCTCTTCGTTTCAAATTACTTACTCCCTCCATTTCAGGTTATAAAACATTTTGACTTTGATCAAACTTAAACTACTTTAAATTTAACTAAGTTTATATATAAATATAATAATATTTATAATACCAAATTAGTTTCATTAAATCAATAATTGAACATATTTTCATAATAAATTTGTCTTGGGTTGAAAATGTTATTATTTTTTCTACAAACTTAGTCAAACTTAAAGCAGTTTGACTTTGACCAAAGTCAAAACGTCTTATAACCTGAAACGGAGGGAGTAGTAGAAAAGATAGACATACACATAGTTAACTTAGGACAGATAAAAAAAGGTAGATATATTTAACTTAGGACAAATATAGAATGAGAACGAGAGAGTAACAGGTATTACAATTTAGGTGCTTAACACAGTTCTAACTCAAGTTTATTTTGGAGTTGGGTTTTTTCTAGCTTGGGAAATTGTTGAAATTTCTTTGGTTAAAGCTGTTACTACTCCATTAATTAATTTGGCCCACTCACTAAGGCACACAGGTATTTTAATATTCAACTCTCTGAATATTTTATCAATAAATAGTTTATTATAAATTAAATTCTATTTGATGAAAATAATATCATTGGATTATCATTTAAATTTACTTTCATATGACTATGGTTTTGTTACTAGAAACATTATAATATATGACAAATTTAAAGTCCAAAAGTAGCTTTTGGCTGTGTTCGGAGGAGGGGTTGGGAGCCCCTCCTCCCCAGCACGCAAAATGAAGTTCGTTTTATTGCATGATTAATTAAGTATTAACTGATTTTTTTAAAAAATGGATTAATATGATTTTTTTAAACAACTTTCATATAGAAGTTTTTGCATAAATCACACCGTTTAGCAGTTTGAAAAATGTGTGCGCGGAAAACGAGATAGATGGGTTAGGAAAATGGGGGAAAGAACACAGCCTTTGAAGACTATGCCAAGTTTGATCGTACCTTAATAAGTGAGATGAATGGAGTACTATGCTAAGAATATTAGGGTATGATATTTTCTAATATTTTTATCAAAATAAAAAGATTATGCCACTTTGATTTAATCTACAAAGTCTGTTTTTTCTCTAAAGAATTTAAGCATTGGAGCCATGTCAAACAGGGCTGATTTGCCTTTTATGCTGCACATATGGGATGACAAATCTTGGAAACTAGATGATACCCCGCGCGTTGCTGCGGAATGTTGGTGTATAACATAGTTGCAAAACTATAATATGTAAATCAAATATTGTAAATCCCACTAAGAAATTAGTCATTAACAGTCAAAACAGGATACATGGAGGTTAGAAAGATTATGCAATAATCTTACCCATTAGCAATCACGGGCTAGCCAAAGTACAAATTGCAGTTAGCAGATTGTATTATCAATGTTCTCATAAATTAATTGTTCGAAGAATTAAATTTATTAAAAAAAAGTGAAGTTTTGTGAGAACATCTCAATCAACATGTTTAACTCGTACATCAGACTTCCTCGGCCAACATTTAAATCATCACGTTAATTCATACTGCTAACTTCACTGGCTCAAAGGATGATAAATATATTTATGTAGAGATTAAGCTTATATGGTCTATTATATAACTATGAAATACTACTACATGACTAACACATCTAGGAATAGAATAAGAAAATCACCTTATGAAATCATGAAGTTGATTTATAGTAGCTGACATATATAAGGTCTGAAAAGGGGTAAAATCACATATTATTCATTGCGCTATGCTGCAAACTGGATCGAATTCTCACCTGTGGAATTTTTTTCTGCATGATAGAAAATTATTTGATAAGCAGAAAAGGAGTGCAGCCTTGAAATTTTCCGTATCACTCTCATGGAGAGGAAAACTAAGTTATCGTCAGCAATCGTTTCTTGGAAACGTAAAATTCTCTTCAGGAATCAGAACAGAATTGAATACAAAGGTAGAAATGTCTAATCAAAATTTACCTCGTCAATTAGGGTCAGATCGATCATGTAAGTGACATTACAAAAGATAAAACATAGCGATATTATCAAGTTATATGTCCAAAAATGGGGCAATCAGAAGAACACATGCATGCTATTTTACAAAAAGGCAGAAAAAAATGAGTACAATCATCAACTCACCTAATAGCTATGTTCCAATTTGGGGATCGAGAAAATAAACTCAGCATTGGAGAACGGAAGAAAACATGCACCTGATCAAAAACTTGAAAACTGATGGGATTAAGAACGGTAAACACAAAGAAGACACCATGCAATCGGCTAATGTTGAAGCTACCATCAAATCATGTAGCCGAAGGACAAATTAACCATGAACCCTGTAATATGCCCAATATAGTTTCCAGCCAATGGGGCAGACTGAAGAATACCTAAAGCTTCGCTATTTGATGTAAGGGGAGAAAAAAAAAGAGAGTACAGTATAGACATCAGCTTAACCAAAAGCTGATAAATTTGGGATCGAGCCAATGAACTCAACGTAGGAGAATAAGGGGAGAGAAAATGTACCTCATCCAAATACTGATGGGAGTAGGAAAGATAAACACCAGGAAGACACCAATCGCCTGATGTCAGGAGCTGCAAATGAAATCATGTTGACGGAGGACAAATTAGTTGTTTACCCTGCATATATGCCCTATATAGATCTCATTCCCAGCCAAGATCGACCAATGTTTTCTGAATCGAAAGATCAAATCAATGCCCGGATAATCCATATGAGCCACCAGATGAATTGGACGGGAAATTGATGAAAGCCCTGATAATCCGCATGAGTACTGGATAATGATAAGATATCGTGGTGAGCGCCGCGCCGGGATTGAAAGCCTGCATACTTGATACTCGCAGAGCATCGGGAGAAAGCATCGATATTTAGCATGAAGAGGAGGAATGGAATCAGGAGAAAGCTAAATATTTATCATCGATATTTAGCAAACGGAGCAGCGCCAGGGGAGGGGGGAGGGGAAGGGGGAGGAGAAGCGCCGGAGGGGGGGTGTGGAGGAGAAGCGCCGGGAGGGAGAGGGTTGGAGGAGAAGCGGCGCGAGGATGCGAGAGCTGCCGGCGGTGGGCCCGCACCTGGCGCGCGCGATTGGGGAAGGAAGCGAGCGGTCGGCGTCGGGCCCGCACATGGAGCGCGCGATGTGGAGGAAGCGAGCGCAGGATGGGGAAGGGAGGAGTCGCGCGCGGCGGCGGGGCGGAGAAATC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0175800.3 | 2 | 25949097 | A | T |
| Osa02LNT0175800.3 | 2 | 25953095 | A | G |
| Osa02LNT0175800.3 | 2 | 25953449 | T | C |
| Osa02LNT0175800.3 | 2 | 25953946 | G | A |
| Osa02LNT0175800.3 | 2 | 25954361 | A | C |
| Osa02LNT0175800.3 | 2 | 25954395 | A | G |
| Osa02LNT0175800.3 | 2 | 25954666 | C | T |
| Osa02LNT0175800.3 | 2 | 25954948 | T | G |
| Osa02LNT0175800.3 | 2 | 25955178 | T | G |
| Osa02LNT0175800.3 | 2 | 25952902 | G | A |
| Osa02LNT0175800.3 | 2 | 25955229 | A | G |
| Osa02LNT0175800.3 | 2 | 25951243 | A | G |
| Osa02LNT0175800.3 | 2 | 25950134 | A | G |
| Osa02LNT0175800.3 | 2 | 25949840 | A | G |
| Osa02LNT0175800.3 | 2 | 25949892 | T | C |
| Osa02LNT0175800.3 | 2 | 25946755 | T | A |
| Osa02LNT0175800.3 | 2 | 25947209 | C | T |
| Osa02LNT0175800.3 | 2 | 25947311 | C | A |
| Osa02LNT0175800.3 | 2 | 25947477 | T | G |
| Osa02LNT0175800.3 | 2 | 25947669 | T | A |
| Osa02LNT0175800.3 | 2 | 25948816 | T | C |
| Osa02LNT0175800.3 | 2 | 25949363 | A | T |
| Osa02LNT0175800.3 | 2 | 25950052 | T | C |
| Osa02LNT0175800.3 | 2 | 25950174 | A | G |
| Osa02LNT0175800.3 | 2 | 25950470 | G | A |
| Osa02LNT0175800.3 | 2 | 25950937 | A | G |
| Osa02LNT0175800.3 | 2 | 25951068 | T | C |
| Osa02LNT0175800.3 | 2 | 25951350 | G | T |
| Osa02LNT0175800.3 | 2 | 25951520 | A | G |
| Osa02LNT0175800.3 | 2 | 25951582 | A | G |
| Osa02LNT0175800.3 | 2 | 25951672 | A | G |
| Osa02LNT0175800.3 | 2 | 25951850 | C | T |
| Osa02LNT0175800.3 | 2 | 25952171 | C | T |
| Osa02LNT0175800.3 | 2 | 25947289 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0175800.3 | osa-miR5532 | Cleavage | 5.0 | 14.496 | 1 | 22 |
| Osa02LNT0175800.3 | osa-miR812t | Cleavage | 4.0 | 17.178 | 1 | 24 |
| Osa02LNT0175800.3 | osa-miR812u | Cleavage | 4.0 | 17.178 | 1 | 24 |
| Osa02LNT0175800.3 | osa-miR5821 | Cleavage | 4.5 | 8.72 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR5825 | Translation | 5.0 | 7.563 | 1 | 24 |
| Osa02LNT0175800.3 | osa-miR5831 | Translation | 4.0 | 12.48 | 1 | 24 |
| Osa02LNT0175800.3 | osa-miR5831 | Cleavage | 5.0 | 19.212 | 1 | 24 |
| Osa02LNT0175800.3 | osa-miR5179 | Cleavage | 4.5 | 16.958 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR2873c | Translation | 4.0 | 13.148 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR2873c | Translation | 5.0 | 12.31 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR1437b-5p | Translation | 3.5 | 23.15 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR393a | Cleavage | 5.0 | 18.376 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR395f | Cleavage | 4.5 | 16.362 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR395f | Cleavage | 5.0 | 10.619 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR395u | Cleavage | 4.5 | 16.362 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR156k | Cleavage | 5.0 | 20.917 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR159a.1 | Cleavage | 5.0 | 6.241 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR159b | Cleavage | 5.0 | 6.241 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR169i-5p.2 | Translation | 4.0 | 12.948 | 1 | 22 |
| Osa02LNT0175800.3 | osa-miR393b-5p | Cleavage | 5.0 | 18.376 | 1 | 22 |
| Osa02LNT0175800.3 | osa-miR419 | Cleavage | 5.0 | 13.487 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR437 | Translation | 4.5 | 8.518 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR396e-3p | Translation | 4.5 | 20.697 | 1 | 24 |
| Osa02LNT0175800.3 | osa-miR528-3p | Cleavage | 2.5 | 20.416 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR535-3p | Cleavage | 4.0 | 14.803 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR535-3p | Translation | 5.0 | 13.584 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR810b.2 | Cleavage | 4.5 | 11.47 | 1 | 20 |
| Osa02LNT0175800.3 | osa-miR1442 | Translation | 5.0 | 11.692 | 1 | 20 |
| Osa02LNT0175800.3 | osa-miR1439 | Cleavage | 3.5 | 6.071 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR1439 | Translation | 4.5 | 4.015 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR1848 | Translation | 3.5 | 19.948 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR1860-5p | Cleavage | 4.5 | 18.982 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR2874 | Cleavage | 2.5 | 7.176 | 1 | 24 |
| Osa02LNT0175800.3 | osa-miR812n-3p | Cleavage | 4.0 | 17.178 | 1 | 24 |
| Osa02LNT0175800.3 | osa-miR2873b | Translation | 4.5 | 11.91 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR5076 | Cleavage | 4.5 | 22.013 | 1 | 22 |
| Osa02LNT0175800.3 | osa-miR5081 | Translation | 5.0 | 9.022 | 1 | 22 |
| Osa02LNT0175800.3 | osa-miR5081 | Translation | 4.5 | 17.909 | 1 | 22 |
| Osa02LNT0175800.3 | osa-miR5081 | Translation | 4.0 | 15.372 | 1 | 22 |
| Osa02LNT0175800.3 | osa-miR5145 | Translation | 5.0 | 13.298 | 1 | 24 |
| Osa02LNT0175800.3 | osa-miR5145 | Translation | 5.0 | 13.817 | 1 | 24 |
| Osa02LNT0175800.3 | osa-miR5486 | Translation | 5.0 | 10.625 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR2873b | Translation | 3.0 | 14.45 | 1 | 21 |
| Osa02LNT0175800.3 | osa-miR5835 | Cleavage | 4.5 | 11.654 | 1 | 24 |
| Osa02LNT0175800.3 | osa-miR535-3p | Cleavage | 4.5 | 10.959 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0175800.3 | 2 | nan | Others | Others | C424 | G45 |
| Osa02LNT0175800.3 | 2 | qRPA-2-c | Resistance or Tolerance | Other soil stress tolerance | C424 | G45 |
| Osa02LNT0175800.3 | 2 | Tiller number | Morphological trait | Culm/leaf | R26 | C424 |
| Osa02LNT0175800.3 | 2 | Sn2a | Morphological trait | Dwarf | C424 | G45 |
| Osa02LNT0175800.3 | 2 | qPTD-2 | Morphological trait | Panicle/flower | C424 | G45 |
| Osa02LNT0175800.3 | 2 | qGRH-2 | Resistance or Tolerance | Insect resistance | C621 | C601 |
| Osa02LNT0175800.3 | 2 | qPH-2 | Morphological trait | Dwarf | RG324 | RG83 |
| Osa02LNT0175800.3 | 2 | yld2.1 | Morphological trait | Seed | RM262 | RM263 |
| Osa02LNT0175800.3 | 2 | qSS-2 | Physiological trait | Sterility | RM301 | RM263 |
| Osa02LNT0175800.3 | 2 | qSB-2 | Resistance or Tolerance | Sheath blight resistance | G45 | RZ273 |
| Osa02LNT0175800.3 | 2 | nan | Physiological trait | Eating quality | C621 | C370 |
| Osa02LNT0175800.3 | 2 | qCSH2 | Resistance or Tolerance | Cold tolerance | RM262 | RM263 |
| Osa02LNT0175800.3 | 2 | Hbd2 | Physiological trait | Lethality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)