>Osa02LNT0176800.1

ATCCCGACGCCGAAAGCCCGAAACCTAAACACCTCCTCTTCCTCGCACGCCCATCTCCGGATTCCAACCAAATCTCCGGGATGGCCTCGACCTGCTTCCGCGCCGCCGCCCGCATGGCCTCCTCCGCCTGCCGCTCGGCGGCCTCCCGCTCAATCCCCTCCGCCGCGCGGCGCGGCGCCCCTCGCATCTCCAGGCTGCCGGTGGAGCTCGGGTGCAGCGCGGGGTTGTCGCTGCTGCCGCTGCACAGCGCGGTGGCGGCGGCGAGGCTGACGTCGCGGCTGAGCACGGCGTCGCGGAGCTGCTGCGCGCTCTCTCAGGAGATGGGTCAGTCTGTCCCAAGGTGATAAATGCTGGAAGACCTGCTCATGTCGTGCTATCAGACAATTGATTTTGTAGAGTGAACTAAATTGGTTTCTGTGTTGCCTGATTTTACCCCTCCTAGAACTGTGGTTCTGTTGGACCTTTCAAAGTTTTTGAGATAATGCCCCTTGATATCATTTGTTAAAAACAATCAAGGACATAATGCAAAAGCCCGAGCTGTATTTCTTAGTTACAATTCTGGGTGTCTTTCCTGTGATAATAATGATAAATGAGATGCAATTTACAAGTA

Explanation	CPC Score
noncoding (weak)	-0.839225

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0176800.1	osa-miR6250	Translation	4.5	20.385	1	22
Osa02LNT0176800.1	osa-miR5510	Translation	4.0	22.851	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0176800.1	2	yld2.1	Morphological trait	Seed	RM262	RM263
Osa02LNT0176800.1	2	qSS-2	Physiological trait	Sterility	RM301	RM263
Osa02LNT0176800.1	2	qSB-2	Resistance or Tolerance	Sheath blight resistance	G45	RZ273
Osa02LNT0176800.1	2	nan	Physiological trait	Eating quality	C621	C370
Osa02LNT0176800.1	2	Hbd2	Physiological trait	Lethality	nan	nan
Osa02LNT0176800.1	2	qCSH2	Resistance or Tolerance	Cold tolerance	RM262	RM263
Osa02LNT0176800.1	2	nan	Physiological trait	Eating quality	nan	nan
Osa02LNT0176800.1	2	nan	Physiological trait	Eating quality	nan	nan
Osa02LNT0176800.1	2	qGRH-2	Resistance or Tolerance	Insect resistance	C621	C601
Osa02LNT0176800.1	2	T2-2tiller	Morphological trait	Culm/leaf	C424	C747
Osa02LNT0176800.1	2	qPH-2	Morphological trait	Dwarf	RG324	RG83

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus