>Osa02LNT0177400.1

GCAATGCAGCAGCCCATGTATGAACCTGATGATGACCATTTTGTATCTCCTCGTAAACTGGAGAATTCAGGCGATGATGCAGACATATATGGTAGACTCCAAGAGGCTCTTAGTGAAACTCAAGACCTGAAGAGAGAGACATACGAAGAATCAACGAAACGTCGGAACGCCGAAAGAAATCTGATTTCAGCTCTTCAAAAGGTCAAAGAGTTGGAGAACCTGTATCAGAAGGAAGTCATGCATCGGAAAATAACCGAAGAGGCACTGGAGAAACAGATACAGGAGACAGAAGAAAC

Explanation	CPC Score
noncoding (weak)	-0.653653

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0177400.1	2	nan	Physiological trait	Germination/dormancy	RM263	RM221
Osa02LNT0177400.1	2	qSB-2	Resistance or Tolerance	Sheath blight resistance	G45	RZ273
Osa02LNT0177400.1	2	qCHR-2	Others	Others	RM263	RG520
Osa02LNT0177400.1	2	nan	Physiological trait	Eating quality	C621	C370
Osa02LNT0177400.1	2	Hbd2	Physiological trait	Lethality	nan	nan
Osa02LNT0177400.1	2	nan	Physiological trait	Eating quality	nan	nan
Osa02LNT0177400.1	2	nan	Physiological trait	Eating quality	nan	nan
Osa02LNT0177400.1	2	qSDW2	Resistance or Tolerance	Cold tolerance	RM263	RM6
Osa02LNT0177400.1	2	T2-2tiller	Morphological trait	Culm/leaf	C424	C747
Osa02LNT0177400.1	2	oa2.1	Resistance or Tolerance	Drought tolerance	RM263	R3393
Osa02LNT0177400.1	2	qGRH-2	Resistance or Tolerance	Insect resistance	C621	C601
Osa02LNT0177400.1	2	qPH-2	Morphological trait	Dwarf	RG324	RG83

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus