>Osa02LNT0178000.1

CTGTCCAATTGTGGTTGGTGACATGGTTCAGGAGTCTAACGGTGTACCGGAAACAGATATAGTGTATATCTGGAAGTGGAGTCTATAAATAGGTCCCTACCCTCCAGCCTCATAATGCATTGTGAGCGGAACAACGGAAAAGGAATAGAGGGTAGGCCGGATAGACCCACGTAAACCTAACAATATTTGCTTTTCTTGCACCTCCAAGGATAGACTATTCAACTAAACCTGATCAACAGCGGAACACATACAATCAGTGTACTTTAGTACAACAGCACTAAACTTGATAGCAGATCACATTAAATTAAGCGATAATCCCAGTTATGGCATACACAGCAGAGGAGTGAAGCCACAATCTCTCCAGGACATTGCCACAGGTAATGAATATGAAATACTACCGCAATCTCGCCGGTGCTACCAAATAAACCACCACCTAATCAGAACAAATAGCCACATCATCAAGCAGTCATCATGTAAAAACGAGAAAATGGGAAAACTGACCACCAGCCGAAATCTTTTTCAGAGGTTCATTCCGTGAAAGAACCGGAGTAGGAGGAGGAGGCCTCGGGGTGGCCGCCGGCAAGCCGACCTCCGGAGGGACGGCGCCAGGAACAGTGGAGGAGGGGCGCGCGCGTGGGGGAGGCGCGGGTGGTGCGGCCGTGCGAGGGGGCGGCGCTGCCGCTGGCTAGTGGAGACATCGGAGTTCGGAGCGAGGAGAGGTGGCGTGGCGAGACGGTGGGGAATCGCGTGGGCCTTTGCGCGTCCCGGAGAAACGGC

Explanation	CPC Score
noncoding	-1.43279

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0178000.1	2	27241354	T	A

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0178000.1	osa-miR1848	Cleavage	4.5	21.161	1	21
Osa02LNT0178000.1	osa-miR5072	Translation	5.0	18.798	1	22
Osa02LNT0178000.1	osa-miR5153	Cleavage	4.5	20.274	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0178000.1	2	nan	Physiological trait	Eating quality	nan	nan
Osa02LNT0178000.1	2	nan	Physiological trait	Eating quality	nan	nan
Osa02LNT0178000.1	2	T2-2tiller	Morphological trait	Culm/leaf	C424	C747
Osa02LNT0178000.1	2	oa2.1	Resistance or Tolerance	Drought tolerance	RM263	R3393
Osa02LNT0178000.1	2	qSDW2	Resistance or Tolerance	Cold tolerance	RM263	RM6
Osa02LNT0178000.1	2	qPH-2	Morphological trait	Dwarf	RG324	RG83
Osa02LNT0178000.1	2	qGRH-2	Resistance or Tolerance	Insect resistance	C621	C601
Osa02LNT0178000.1	2	qCHR-2	Others	Others	RM263	RG520
Osa02LNT0178000.1	2	nan	Physiological trait	Germination/dormancy	RM263	RM221
Osa02LNT0178000.1	2	qSB-2	Resistance or Tolerance	Sheath blight resistance	G45	RZ273
Osa02LNT0178000.1	2	nan	Physiological trait	Eating quality	C621	C370

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus