© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0015400.2
CAGTAATTCAAAAGCAATATCAGTTTATTTGATCCCTCAACCCCTACTTTTTACATATACTAAATAAAAGTTAGTATGATCAATGTATTTCTTCCGCCTATAAGAAAAAGAAAGAAAAGAATGAATTTGACTATACTTTACAGAAGGTAGAACCTCAGAAATAAGATAATTTGAATTGCTATAAAAAATCGATAGCTAACTGTGAAAAAAGATCAAGAAAGACAAAAGAATCGGTGCATGCAAAAATGTGCATAGGCATGTAAACTTCTGTCCGAGACTTCAGTTCCTTAAAAAATGAAGCTACTGTTATGTACTACCATGTATGTTGAATCAGCCTGCAACTCTGAAGTAACCTTCATATCGATGACCTCTGACTTCAGCAATGGAACCAATGAGTGGAACCAAGCATAATCTTCTCAGCCAAAACGACAGAAAGGTACAACCAAAAGAAGCCGGCCGCTAGCTAGAATCTTCCAAGAGTATCTAATCATCATGTGAAAAGCGTGACGACATCTCTTCTGTATCCCCTAACTATCAGGATCCTCGGGATGTTCTCTACAAGCAGATCCATGTACTCCATGTAGCAGTATGCCAGGTGGTTCAGTGGTGGCGGTGGAAGGCTCACGAGCACCACGACTGCCATCCTGGAGTGCCTAAGGATAGTAGCGTTCAGCTTCAGCATCGTGTAGAGGAACTTTTCAACCTTCTGTTCATCAACCACGACCTGCTTGCCACCCTCCATCAGGGGCCGGCGTTCGCGTTCCGCGGCTTCCTTCAGCTGAGAAATGTATGTTCTGATTCTGCTCTGCGCGCTTCTGTACACCTCAGGGTCATCCTTCTTCGAGCCACCGCTGCGATCTGGGTCTGCTTCCCATGACTTCACAGTCACAACGATCACATCAGCTTGCATCCTAAGATCGTACAAGAACTTTTTGACGTCTGCCTTTAGCTCCTCGGCCTCGGTATCTTCTTCAGCTATGCAGAAGACCTGAATCTTGCAGCTCTCGAAGCTTTCTTTGGTGAGTAGGAGCTGAGACAGAAGGAGCATCAATCCTCCATCCCTCACAATCCAGTATAGGTCGATTGTCCCGTACTGTCGTTGGTACTCATTAGGCCATTCATCTAGTCCTTTCACAATGACGACAGCCTTGTTAGCAGTAATGCAATCGTTTATGATGCTGACAAATGTTGATGGTATCTGTGTCAGATTCTCACGACGCCAGATTTCTGGGTACCGCATCACAACAATGTTTGGTTTCAAATTCCCTAGGCCCATTGTCTGAACAATGCTGCGAAAACCGATAGATGTTGAGGGTGCTACGATAATCTCTGCAACGCCCTCACAGCGCCTATAGTCAATATAAGCGCTCAGTTGGCGGCATGCTGTCTTTGCATCCTCAGCAGATTCATGATAGTCGCCATCAATAATTGAGACAAATATTGACATACCACGGCCCTTTTTCTTCATGCAGTTGGCAAAATCCGCGAGTTTTGGATGGCACGGGACATCTTCTGGAAGTTTACCCCAAGGCCGACAAAATATGAGAGGAATAGGGTACCAATTCTTAGGATGAACTTGATTTGCTCCCATTGATCGAAGACTTCTTAGAGCCAGTTGAAAGTATGCACTCTTAAATCCGTCCCCCCAGTCCCCTGCCTTTCCTTTTAAGCTGACATAGTAGTATATGAGGCAATACAAAGCAATGCACCGATGAGAGAAAGGCTCCAGTGGTGCAACTTCCATCGGGGGCGCCAACTAGGAGCATCAAGGAGGTCAAGCAGAAAGCATGACAAGTTCACACCAGCATAACACAGAAGGAAAAACATGGTGATAGTGGGTGTAATTACATCCAAGTTCCCAATGATGACACAGCTAATACAGATGAAGCTTGTAAACAGAGTTGCCACATGAGGTTCAGACCCTTCATAAGCCTTAAAATAATTAAGTACAGGAAGAATGTCATCATTCGCTATTGCTGCAAGTAACCTTGGAGCCCCTGTCAGACTCTGTAGCGCTGCACCTAAAGTGGATAGAATTATACCAGCATAAACTACTGCTGGAGAGGGCCAAGCAACTGCAGCACATAGAAGCCTGTCAGTCAGAAGCCCCTCTCTTGTAGACAATGCTCCGAACAGAAACACAGATAGTAGATACATCATAGTAGTTGAAATGGTAGCATGTAATGTTCCAATTGGTATTGAACGTTGTGTGTCTTTCAGTGAAGCAGACCGATTTGAACCAGCCATGATTCCTGTAACTGCTGGGAAGTAGAGACCTAACAAAGCATTAAAATCCCAATATATAGACCCATTTGGATCAGGAACTCCAGCATTGTTTGTTCGTTGGTAGTCTGAACTCCAGTTGTCTTTCAATGTAGTTATACTCAAACCAGTTATCCACTTTGAAGCATTTGGCCTTGGTGCAATAAAGACACCGATGTAAATGCACAGGATTGAGAAGAGCACTGGTATTAAGAAAGCAGGTGCAACTTTGTTGATAATTTTGACGCCACCAAATACAATAAAACAAAGCAATATGGTCACGATGATGCCGTAGACCTGGAGGTCATGCAAGTTGGGTGTTGAGATAGTTGTTGCATTGCCTGCTGCGGTACCGTTTACGAACGTATTGGTGACCACTGTTACACTCTCTGCTTTTTAAAATCGCTTGAAAAAATTCAGCAGAAGGAACAGCATCCAAAAAGGTTTCGACAGCTCCCAGCACATACATAGCTCCGGCAACTGCATTCCCAAGGAAGAAACACAATCCAATACTAACTCCAACTTCCGGACCAAGTGCCCTGCCAATGAGATAGTAAGGGCCACCACCCTTCATCGCCCCATTCGTCGCAATTGCACTTAATGATATCGTAGTTAAAAATGTGCATGAACCACAAAATGCGACTAAAACAAGTGACTGCCATACGCCTCCCATACCAACGATCCAAGTAAAGCGAATATAATAGATTATTCCCAAGATGTTCTGCAGGCATGGCACGAATACACCCATCATGGTATCAAGTTTAGTTTCAGTTTCCTTGGGGTGTCCAATGGCAATCCCTGCATTTTCTCCATCCCTAGTACTAGCAGATGCCTGAGCTTGTTCGCCTACCATTCTCTTAAGTCCCAAAATATTGACCAGAGAGTCAAAACCAAACAGCTCAAGTTTTGAATCGCCTTGAGATCCATTAGAGCTACGCCCATTAGAAGAAGCCATATGCATTCTTGCATCAGTGCGTAGGTTAGTTCCAGGCTTGATGTACCTGGGCCCTGCGGAGGCGGAGGCATCGGCGGAAGATCCGAACTCCATGGGCGCCATCTGGACGACGGCGCGGTCGTGCGACTCCACCGTGCGGTACCGCTGCTGCGGCGCCGGCCTCATCGCCGGGGCCTCCTCGTCATGGCGGCCGGCCCCGCCGAATCCCCCTCTCTCCATATCTCCCCCCCCCCCCCCACCCCAACCCAAGAGGTCGACGAACTGCACTGCACGGCACAGGGCGATCAATGATGTGAAAACCCAAGGGTTGGGTCAGTTAGCTAAGGAGCGGCCATGGCTCTACGAGGTCGGCATTGGCCGAGGCTCGCCGCCGGCGCGCTAGCTGCTTCGGGGGGGCGGGGGTCGCCGGCGTCGAGCGGTGGCGTGCGGCGGCGCGGATGAGATGAGAGGTGGCGGGGCGGGGAAGGAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0015400.2 | 1 | 11255870 | T | C |
| Osa01LNT0015400.2 | 1 | 11255929 | G | A |
| Osa01LNT0015400.2 | 1 | 11262497 | A | G |
| Osa01LNT0015400.2 | 1 | 11262664 | T | C |
| Osa01LNT0015400.2 | 1 | 11263845 | A | G |
| Osa01LNT0015400.2 | 1 | 11265612 | T | C |
| Osa01LNT0015400.2 | 1 | 11258279 | T | G |
| Osa01LNT0015400.2 | 1 | 11260241 | T | C |
| Osa01LNT0015400.2 | 1 | 11260508 | C | T |
| Osa01LNT0015400.2 | 1 | 11260702 | G | A |
| Osa01LNT0015400.2 | 1 | 11261371 | T | C |
| Osa01LNT0015400.2 | 1 | 11261382 | T | C |
| Osa01LNT0015400.2 | 1 | 11261396 | A | G |
| Osa01LNT0015400.2 | 1 | 11261628 | G | A |
| Osa01LNT0015400.2 | 1 | 11262057 | A | G |
| Osa01LNT0015400.2 | 1 | 11256584 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0015400.2 | osa-miR5536 | Translation | 5.0 | 12.47 | 1 | 22 |
| Osa01LNT0015400.2 | osa-miR5792 | Cleavage | 4.0 | 18.16 | 1 | 24 |
| Osa01LNT0015400.2 | osa-miR5827 | Cleavage | 4.5 | 10.226 | 1 | 21 |
| Osa01LNT0015400.2 | osa-miR5830 | Cleavage | 4.5 | 12.674 | 1 | 24 |
| Osa01LNT0015400.2 | osa-miR1440b | Cleavage | 4.0 | 18.083 | 1 | 21 |
| Osa01LNT0015400.2 | osa-miR6247 | Translation | 4.5 | 14.73 | 1 | 21 |
| Osa01LNT0015400.2 | osa-miR6251 | Translation | 4.0 | 13.509 | 1 | 21 |
| Osa01LNT0015400.2 | osa-miR166a-5p | Translation | 4.0 | 18.534 | 1 | 21 |
| Osa01LNT0015400.2 | osa-miR166e-5p | Translation | 4.0 | 18.534 | 1 | 21 |
| Osa01LNT0015400.2 | osa-miR397a | Cleavage | 4.5 | 14.346 | 1 | 21 |
| Osa01LNT0015400.2 | osa-miR171c-5p | Translation | 4.5 | 11.477 | 1 | 21 |
| Osa01LNT0015400.2 | osa-miR166h-5p | Cleavage | 4.5 | 18.534 | 1 | 21 |
| Osa01LNT0015400.2 | osa-miR1850.1 | Cleavage | 4.5 | 9.388 | 1 | 21 |
| Osa01LNT0015400.2 | osa-miR1320-3p | Cleavage | 4.5 | 10.242 | 1 | 21 |
| Osa01LNT0015400.2 | osa-miR2055 | Cleavage | 2.5 | 12.951 | 1 | 21 |
| Osa01LNT0015400.2 | osa-miR2094-5p | Cleavage | 5.0 | 18.149 | 1 | 21 |
| Osa01LNT0015400.2 | osa-miR2099-3p | Cleavage | 4.5 | 13.75 | 1 | 20 |
| Osa01LNT0015400.2 | osa-miR2871a-3p | Translation | 4.5 | 16.412 | 1 | 21 |
| Osa01LNT0015400.2 | osa-miR2871b | Translation | 4.5 | 16.412 | 1 | 21 |
| Osa01LNT0015400.2 | osa-miR5076 | Cleavage | 4.5 | 13.778 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0015400.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0015400.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0015400.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0015400.2 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0015400.2 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0015400.2 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0015400.2 | 1 | nan | Resistance or Tolerance | Insect resistance | RM576 | RM3412 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)