© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0181100.1
CGTTGACAAATGCCACAAACTTCGCAAGGTGGTCAACCACGTAAACTGATCCTGGAACAAAATGAACAACAATTACAAGCCTCAACCCTTGACAGTTACAGGCATCGCGCCATTGTACATTCTCAAAAGCTAACTTCTGTGAGCGCCCATCAAAGCTATGTCTACTACAAATATATTTCAATTACAGGGGGAGAACATAATTGAAGTGGGAAAATCTACTAGTACATCATCATCATCACCAAGCACACAACCTAGAGTTCCAAGAATGGCATGTCATGAATCGAAAACAGAAACGCTAGAAATAACCTATTCAGTAGCCCTCTGCAATTGTCATGTAGTGAAGAAAGACCATAGCTTTTTCCCAATTGATTGGTTCCGCCTTTCGGAGTCATCGTCCTCCTCATCATCCTGTTCAGCTCCAAGTTCACTTCCTGATGGTGTCATAGGCATCGCATCTGGTGCTGCATCTATACCATCCACAATATCTACCCCCTCTGCACTAGTGACCTCTACAGGGCCATGTGTGTCACCAGCTTCAGCCTGCGAGTACTCGGGTAATTGAGATGCATCATCAGCTGATTGGGAGGCCCCTTTGCTCCCAGTGGCAGGTTCCTCAGCCTTTGAGGTTCCTTCTGTGTCATCTGCGGTAGCCTCTACTGTCTGTTTACTTCCCTTTTTCGCAGCTTTCTTTTTGTTGGTTTGGGCTGCAGTTGCCGCATTTGCAACTGTGGTGCGCCTGAGGTTGTAGCGTTTTTCTCCTGGGGCTTGCGTAACTGCTGCAGCTGTTTGGCGCCTCTTGCGGCGCTGCCCTCCAAGTGAAACACTTTCAGAATGAGCTTCACTGTCCTCATCTTGCTCACTGATTGTGGCTCCAGCAAAGCGCCGCTTCCGTGTACCACCCACAGTAACTGAATCTCCCTGGCCATCATCCTTTTTTACTTCTAAATTCTCACCAAGTATTTCTTTAGCATCTTCAACTACCGCAAGAACAGACCGTGTCCGTTTTACACCACCTTTTGCTCTACCCTTCCTGTTTTGTTGGCGCCGTCCTTGTTTTGATGTTTCAGGCTCCAAATCTACAACGGGAAGCACTGCCGAGTCCTTCCCGTTTTGGTCAACATCCACAATAGTTGTGTCCACCACCATGTCCGTGTTGCCATCAAATGATTGAGTTCCATGAATATCTACACAATTATCTGCAACTCCAAGAGAAGACTCCATCTGGACGTCATCTGCTATATCTTGCCTTTCAGATTCTTCATTCTCAAATGCCCCACTCTCAGATGGGAGATCCTCAGCATCAAATGAGTTATAGGCTACCTGATAGACAGGAGTTGGCTCATAATCATCATCGCTCTGCGATGCTTCCTCTAGTCTTGCACCAAAGTCTGTGTTCTTCACTGCTTGCTGTTCAGATGATTGCTCAGCCTTCTTCCTAGGAGAAAACTTGAAAATCCTTGAACACTTCTGCAACAATGATAAACGGCCACCTGAATTAACAAGTGCTCCGGTCTCTTGGGCTAAGGTGTCAGGATTGGGGGAACGATCATCCGCCTCAACAGCAAGACTAGGATATTCTATATCAGTGCTATCTTTAAGAGCTAGGGCATCCAAGCCCTCAAAAATAATAACCCCGCAATTTTTGCACACCTTGTACTTTTCAAATATATCGATGAGGTTATTCCTGTCCCTGTTATATGCTTCTCTACGCTCTTTCAGACTCTTGCTGAGAGTGTTCAGACTATCAATGTCCCTTCTGATATCTGCCTTGTCAGTTTCCAGTTTTTGCCTATCCTCCACAAGAACTTCCTTTTCCTTCTGCAGCTGTTTTTTCTCCAATAGTATCTTCTGAATCTTTGATTCATTCAATTCGGCTGCACGTTTGAGCTCATTTTCTACAAAGTCCATCTTCCTATTTAACTCATTTTCCTTCTCTTCAAGTTCTCTCTCTTTGCTCGCTTGTTTTTTCTCCATCTCCATCTCCAATTCATGCCGATGGAGCTGCAAATTTCGTTGAAGATCAGCACGCTCTCTCTTTAGCAATTCCTCATTTTCCAAACGCTGATGGTCTATATTATCGATCAAGGATTTTTCCTTAAGTGCGAGATTTTCCCCCTGCTCCTTGTATTTTATGTCCAACTCATCCTCTCTATCCTTTAGCCTTTTTTCTTCATTGTCATGCCACCTTTCTAGATTCTTCTTTTCATTGTTCAGTTTCTTGGCTTCCTCTTCCAAGTGAGTTCTTTTTTCATCCAGCTGCTCCCACTCTTCTTCAAATTTCTGACGCTGCTTCCTCAAATCTTCAGTTTCCTCAGAAAGAGAGTTGCTTCGCATTCTGTATTCATCAATCTCTTTCTTCAGTTGTGCTGTAAGCATGATGTGCTCTTGCCTCTCTTCCTCTGTAAGTTTCAAATTGTTCTGCTCTTGCAATATTTTCTCCTTTTCAGCAACCACTGTGGCTTTCAAACTCTCAAGCTCCAATTTGTACATCTCAGCCTGCTTTCTTTCATTTTCAATCTGCAGCTTTTGTTCCGATAACTGTTTCTCATCATTTTGTAGTGATTCCTCCCACTTCTTCAGAGCATTCGATTTTGTATCAAGATCATTTTGCCATTCTTCCAATTTTTTCTTACTTTCATTTAATACTTGTTCTTTTTTCGAAAGCTTCTCCTCCGAAGATCTGACATCTTTTTCCCTCTGCACCAAATCAGCTTCCTTCTGTACCAACATTGCATCAAATGATTTCTTCTCATTCTCCAGTTGTAAATCAAAATCTCGTCTTTTGGATTCAAGCTTCACATTATGATCTTCAAGAAGCTTCTGAAGCCCAACTTTTTCCCTTGCACTGACTTTTTCTTCCCTTTCAGCTATTTTTTTCTCTCTTTCTTCTAATTTCCTGTTCTTTGATTCAGCTTCCTTTTCTTGTAAATGTAATTCAGCTAGTCGTTTGTTAATGTCGTCCTCTTTAATTTTGAGTGTAGCTTTAGTATGCTCCAGAGCTTTTTTTGCTTCCTCCAACTCTTCTTGCTTTATCTTGAAAAGTTTGTCATTCTCGTTTGCTCTCTCCTCTCGATCATTTAGGGATCTCTGCAAATCAAGAATTCTATTCTGACTTTCCTTAAGCTTTTTGTCCCAGTCACGTAATGAATCCTCCTGACGCTTGATCCGGTCCTCCCCTGCCTTCCTCTCATTTTCAAAATATAGCTTCTCCTTCTCCAGCCTACGCTGACGAGCTTCTACCTCCTCTAAATCCCTGTCAGCCTGAGATTTCTTACGGTTTGCCTCAGCAAGCTTCGCATCTGCAGCATGAAGCTTACCCTCGATCTCCAACCTTTTTTCCTCCAAACTAGCCTCAAGGGATTGAGCATCAGTTATCTTTTTCTCAGACATA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0181100.1 | 2 | 29385307 | T | C |
| Osa02LNT0181100.1 | 2 | 29382379 | T | A |
| Osa02LNT0181100.1 | 2 | 29383029 | G | A |
| Osa02LNT0181100.1 | 2 | 29383121 | A | G |
| Osa02LNT0181100.1 | 2 | 29383288 | A | G |
| Osa02LNT0181100.1 | 2 | 29383857 | A | G |
| Osa02LNT0181100.1 | 2 | 29382780 | T | C |
| Osa02LNT0181100.1 | 2 | 29385447 | T | C |
| Osa02LNT0181100.1 | 2 | 29385722 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0181100.1 | osa-miR812v | Cleavage | 4.5 | 12.919 | 1 | 24 |
| Osa02LNT0181100.1 | osa-miR5821 | Translation | 5.0 | 9.768 | 1 | 21 |
| Osa02LNT0181100.1 | osa-miR5821 | Translation | 5.0 | 22.017 | 1 | 21 |
| Osa02LNT0181100.1 | osa-miR5826 | Translation | 4.5 | 18.436 | 1 | 24 |
| Osa02LNT0181100.1 | osa-miR1440b | Translation | 5.0 | 13.722 | 1 | 21 |
| Osa02LNT0181100.1 | osa-miR6246 | Cleavage | 4.5 | 15.104 | 1 | 23 |
| Osa02LNT0181100.1 | osa-miR1861o | Translation | 4.0 | 10.6 | 1 | 22 |
| Osa02LNT0181100.1 | osa-miR160d-3p | Translation | 5.0 | 23.407 | 1 | 21 |
| Osa02LNT0181100.1 | osa-miR159f | Translation | 5.0 | 13.773 | 1 | 21 |
| Osa02LNT0181100.1 | osa-miR160e-3p | Cleavage | 4.5 | 23.407 | 1 | 21 |
| Osa02LNT0181100.1 | osa-miR171c-5p | Cleavage | 4.5 | 12.138 | 1 | 21 |
| Osa02LNT0181100.1 | osa-miR530-3p | Translation | 4.0 | 19.2 | 1 | 21 |
| Osa02LNT0181100.1 | osa-miR395w | Translation | 4.5 | 12.257 | 1 | 22 |
| Osa02LNT0181100.1 | osa-miR1850.1 | Translation | 5.0 | 9.702 | 1 | 21 |
| Osa02LNT0181100.1 | osa-miR1854-5p | Cleavage | 5.0 | 21.402 | 1 | 21 |
| Osa02LNT0181100.1 | osa-miR1861a | Translation | 4.0 | 10.6 | 1 | 22 |
| Osa02LNT0181100.1 | osa-miR1882e-3p | Cleavage | 4.5 | 10.478 | 1 | 24 |
| Osa02LNT0181100.1 | osa-miR1882e-3p | Cleavage | 5.0 | 16.733 | 1 | 24 |
| Osa02LNT0181100.1 | osa-miR2922 | Cleavage | 5.0 | 5.538 | 1 | 20 |
| Osa02LNT0181100.1 | osa-miR2928 | Translation | 3.5 | 10.396 | 1 | 20 |
| Osa02LNT0181100.1 | osa-miR5076 | Translation | 4.0 | 8.905 | 1 | 22 |
| Osa02LNT0181100.1 | osa-miR5076 | Translation | 3.5 | 8.774 | 1 | 22 |
| Osa02LNT0181100.1 | osa-miR5147 | Cleavage | 4.5 | 21.118 | 1 | 21 |
| Osa02LNT0181100.1 | osa-miR5148a | Cleavage | 5.0 | 8.647 | 1 | 24 |
| Osa02LNT0181100.1 | osa-miR5148b | Cleavage | 5.0 | 8.647 | 1 | 24 |
| Osa02LNT0181100.1 | osa-miR5148c | Cleavage | 5.0 | 8.647 | 1 | 24 |
| Osa02LNT0181100.1 | osa-miR5152-5p | Cleavage | 3.5 | 8.162 | 1 | 21 |
| Osa02LNT0181100.1 | osa-miR5495 | Cleavage | 4.0 | 9.68 | 1 | 21 |
| Osa02LNT0181100.1 | osa-miR535-5p | Cleavage | 5.0 | 8.801 | 1 | 21 |
| Osa02LNT0181100.1 | osa-miR1850.1 | Cleavage | 4.0 | 6.288 | 1 | 21 |
| Osa02LNT0181100.1 | osa-miR1854-5p | Translation | 5.0 | 8.375 | 1 | 21 |
| Osa02LNT0181100.1 | osa-miR5076 | Cleavage | 4.5 | 14.136 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0181100.1 | 2 | nan | Morphological trait | Seed | C747 | C1445 |
| Osa02LNT0181100.1 | 2 | qPH-2 | Morphological trait | Dwarf | RG324 | RG83 |
| Osa02LNT0181100.1 | 2 | qLTSPS2 | Physiological trait | Sterility | RM1385 | RM240 |
| Osa02LNT0181100.1 | 2 | qLTSPS2 | Physiological trait | Sterility | RM1385 | RM240 |
| Osa02LNT0181100.1 | 2 | qSB-2 | Resistance or Tolerance | Sheath blight resistance | G45 | RZ273 |
| Osa02LNT0181100.1 | 2 | qCHR-2 | Others | Others | RM263 | RG520 |
| Osa02LNT0181100.1 | 2 | nan | Physiological trait | Eating quality | C621 | C370 |
| Osa02LNT0181100.1 | 2 | qDLR2-1 | Resistance or Tolerance | Other soil stress tolerance | RM525 | RM406 |
| Osa02LNT0181100.1 | 2 | qDLR2-1 | Resistance or Tolerance | Other soil stress tolerance | RM525 | RM406 |
| Osa02LNT0181100.1 | 2 | nan | Physiological trait | Eating quality | nan | nan |
| Osa02LNT0181100.1 | 2 | nan | Physiological trait | Eating quality | nan | nan |
| Osa02LNT0181100.1 | 2 | qSDW2 | Resistance or Tolerance | Cold tolerance | RM263 | RM6 |
| Osa02LNT0181100.1 | 2 | nan | Morphological trait | Panicle/flower | RG139 | CDO686 |
| Osa02LNT0181100.1 | 2 | Hd7 | Physiological trait | Flowering | R3393 | R2511 |
| Osa02LNT0181100.1 | 2 | nan | Physiological trait | Eating quality | RG139 | RZ58 |
| Osa02LNT0181100.1 | 2 | qGRH-2 | Resistance or Tolerance | Insect resistance | C621 | C601 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)