© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0181300.1
GGTCGCTAAAGAGCTAAAGATTTATTATTACTGCAAAAATTGTAGCAATAGAATAGATTATACAAAAAGCAGATGCTGCGGTCTAATTATCCACAGGCAATGAATCCATATATTTTTCTATGAATAACTATATCCTTCAACTTCAAGCATCCTATCCTAATGCCAACCATTCCATCCTGCATTACGCAGGATTCTAGCTTACCAACATGGGCAGTTGGGCACGCATTCCCCATTTCCGCACCTCCATGCTTAGGCTCCCTAAGGAACACCCTCTGAGAGCATGAAGAGTTCAAACACAAACATAGTTGATCACGCTACAGTTGATTGCAACGCTTTTATTATTCCCCTCTTCCATGTGGAAGTCTCTGGTTCAAACCTGAGCTCCCAGGTCGGCCAGTAGTGAAGGTCCTGTTTCAAAGTAAGCACACGAGGTTTGCCATTCAAATGGACGGTCCGCACCCTAACAAATTCACCATTTTCCAATCCCTTCACCACTTGTATAAAAGTTTCAAGATCTGGAGTTGGCTTCCCATTAACTTCCACTATCCACTGCAGAGCATAGAGACCATATCTATGTACGGGACTTCCATGACACCATCTAGCAACATAAACTCCATGACCTTCTTCGGGCAAAAAACCAAGTGCGCGCACTGCTGAATGAGGATCCTGGATTATGCATCCACACCAATTCACCATCCGTGTTGTTCCATTGCCATCTCTTACATCGGTTCCAACAATAAGATCAATTTCTTTTCCCTGACGGAATATTGTCATGTTAAGGACTCCATCTGAATCAACAGATTGGTCCAATTTCTGGCAAGCATTCTCGATATCTAGGAAGCATGTAATTGGCTCCTTATTGATAGCAAGGATCATGTCTCCCTGTTCAAGGAGATTTTCTGCTTTGGATCCAGCCAAACAACCTTTGACCCGCAAAACTTGTCTTCGCACAGGGTCCTTCTTAGCTAGAGCCTGCACCCAGCTATCACTCAATCCATAACTTCTTGCCTTTGAAAGCAAAGTTGGATAGAGTTCCACCTCCAGAAGTCTGATGAATGGTATTGGCCTCCTAACTCCATTGATAATACGAAATGGTCCAGGAGTACCAGAGATTACCTTCTCAAGGACTTGACTTATTGCATATATTGGTATACCTCTAACAAATTGATGATCCTCCGAACTGCTACAACCATATTTCAGCTGGGTGGAAAAGCTTGCCCATAATGCTTGAACTCTTCCTTGCTCATCCGTCAATATACCCGAAAATGCACTACCAAAATCAGTATCGAGCTCAATGACCTCCATATTAATTGCACGATACCGTGGACAGTCAGCTGACCCAATATTAACAGCAGTGCAGGGATTAGTTATGATTGATTTCCTTGATGTAGCCTGCAAGCTTCTACTTAGCCCAACTAGGTAGACAGAATCTCCTCGGCGCAAGGCAGGTTCAGGAAGAAGCTTAGCAGCCCGGACAACTGATGCTCCAGCTCCTAGTGCAGAAGGGTCATAAGCAACCAATGCAAAATTGTGAACGGGATGCAGAAAAACGACTTCTGCAGGTATTTCAATGGGATATGCAGCAAAAGAAAGCATTATATCAGAGATAGATACAGCAACTGTATTCCTATCAACAGCAACCAGACCCAGACAGTCCGAATGATATATTATTACACCAGTTCCGAAGAAGTGTTGCGAATGCACTCCATCAAGCATGCACACTGGTGGTACATGCACCTCAAACATTACAAGGGCTGGTTCAATTACTTGTTCTGCCAATGATGCATTACTTGATATTGTTCGAGCAAGGTCAGAACCATCAACACTAGACAGATGCCTCAAACCACCACCTTTTATTTCATCTAAATCACCAGAAGATGATATCGTTCCCTCAGCAGCTATCTCCTCATCCACCCGCCGCCTTTTTTTCTCAACAAGAGAATCTTCACTCGAGTGGGATCCATCTACATTAATCTCATCATCAGTTTGTGTTTTGATGCATCCATCTGTCAAATTCTCAGACTCATGCTGGCACTTGAGATCCATAGGACTAGATTCTGGTAAAGATGAAACAGAATTGGAGTTTGCATCAATAGGACCAGCATGATGAGCTGAAGCTATAAAAGGAGATTCCGGCGGTATAGCTGATTTTGCAGTCCACAAGCCAGTTGCATCATTTCGAGTATATAACTGAGGAGGCGCATACCATTCATGCCGATCAATGGTCACCAGTACAGACTTATTCCTATAACGGTCGGTGTACTTTACATATTCAAGAGGAACTCTTGCTCCTCTAGATAGTTTTGAAATACATGCAATAAGGTCCCCTAAATTTTCAATATCCTCTCCTGCGAGCTTTTTAATAATAGCATGGCGTGGAACAGATGCCCGAGAGAGCATGTACCCTGCCTCAGCAACATATACGAGACCGCATTTGAACCTAAAATTCCTTGCCTGCTGGTACGAAAGTGGATGGATCACAGCACCACTAACTTCCAAGAAATGATTTGGAGTTATAGAGTGCAAATCCTCAACCTCCAACTTTACTGTTAAAGGTGTACCACCTCTTTCGATCTGCAAATCTATCTCCTTGCCAACACTGTCATCAAGCAAGGTCTCCATTGCGAGAAACTGTGTTACAACCTCATCATTCATGCGAACAAGCACATCACCAGGTTCCAAATGTTTATGTGCAGGTCCTTCTGGAACCACGGAATCAACAACCAGCATTCCAGTCTCGCCTGATGGAGAAACAAGGCGTACCATCTGTTCTGTTTCATTCCTGAGTCCAAGACGCCGAGTTTCTTCAAATCCTTTGTGTTGAAAGGTCACCTGAAGTGTACCACGAGGAATGTAATCAGATTCAGGCTTGCTACCAAAAGCTTCCCAACTGTCACGTATCAGATTAAGTGCCCTAACAACACGTTCTAATGGAAGGAAAAACGCAGAAGCACTGGAAGATTTACTTCCAGCATTCAGGGCGACAGCTCTTCCTTGACAATCAACAACAGGGGAACCACTAGAGCCACCTTTGGTACCAGATGCAGCCTGCATGTAGAATGTGTTGAAATCGTTGTACCCATCCTTCTTGTAGTAAGGTGCTTCTCTATCAAGTCGAGCAAGTGTTCCCGCCAAAATTGACACCTTTTCGCCGCTGTCATTGCCGACAACCCGGATTTCCAGACCAACAGATGCTGCTTCAGGTGCTAGCGGGATCTCATCATACTTAAGGAACTTGATAGCACCTGGATCATAGCGAAAAAAACCAAAATCATGTACAGGATCTCTGTACAGGGGATACACGGGGATCTCCTCCCTGTTCACGAACATCGCCTCCGCGACGACAGGCCCTGGCTTGACGACGTGTCGGTTGGTGAGGATGATGCCCCTGGACTTGTCGACGACGAAGCCGGTGGCGTAGCTGGCGCCGGCGACCTCGGTGTCGAAGGCCCGCGGCGCGGTGGTGCGGAGGACGACGACGGAGGGCACCACGAGTGCCAGCGCCCGGCGCCAGTCCTCCGCCGTGACGGTGGACTCGATCTCCATCGCCAGCTCCCCTCCCGCCTCCTCCTTCGCGGGGCTCTCCATCGATCTGGCCCCTCAAACCTCCTCCTAGGGTTTTTGAGCTCTCTCTCCCCTCCTCCTCAATTCGTCGTCGGAGGTGAGGATTTTTGGGTAGCAATCTCACGCGGGCGATGTGATGGTGGGGCGGTGCGGGTGGGTCGGGGTGGTGGTGAGATCAGCGAGGGTCGCGGGGATGGATGGGAGTGGAGCTGCTGGTAAATGCGCTTGTGGACTCGGCGAGATTTTAGAAGGGGAGACCACC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0181300.1 | 2 | 29485838 | T | C |
| Osa02LNT0181300.1 | 2 | 29485543 | T | G |
| Osa02LNT0181300.1 | 2 | 29484657 | A | G |
| Osa02LNT0181300.1 | 2 | 29484725 | C | T |
| Osa02LNT0181300.1 | 2 | 29485950 | C | T |
| Osa02LNT0181300.1 | 2 | 29487145 | C | T |
| Osa02LNT0181300.1 | 2 | 29487505 | T | C |
| Osa02LNT0181300.1 | 2 | 29487613 | T | G |
| Osa02LNT0181300.1 | 2 | 29487680 | T | C |
| Osa02LNT0181300.1 | 2 | 29487697 | A | G |
| Osa02LNT0181300.1 | 2 | 29488841 | T | A |
| Osa02LNT0181300.1 | 2 | 29488886 | A | G |
| Osa02LNT0181300.1 | 2 | 29489095 | A | T |
| Osa02LNT0181300.1 | 2 | 29489739 | A | G |
| Osa02LNT0181300.1 | 2 | 29489864 | A | G |
| Osa02LNT0181300.1 | 2 | 29490018 | A | G |
| Osa02LNT0181300.1 | 2 | 29490116 | G | A |
| Osa02LNT0181300.1 | 2 | 29490292 | T | G |
| Osa02LNT0181300.1 | 2 | 29491571 | C | A |
| Osa02LNT0181300.1 | 2 | 29491893 | A | G |
| Osa02LNT0181300.1 | 2 | 29492127 | A | G |
| Osa02LNT0181300.1 | 2 | 29492554 | C | A |
| Osa02LNT0181300.1 | 2 | 29493991 | T | C |
| Osa02LNT0181300.1 | 2 | 29494470 | A | G |
| Osa02LNT0181300.1 | 2 | 29485586 | A | G |
| Osa02LNT0181300.1 | 2 | 29494068 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0181300.1 | osa-miR5823 | Cleavage | 4.5 | 18.576 | 1 | 24 |
| Osa02LNT0181300.1 | osa-miR6245 | Cleavage | 5.0 | 16.247 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395b | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395d | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395e | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395g | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395h | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395i | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395j | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395k | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395l | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395s | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395t | Cleavage | 4.5 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395c | Cleavage | 4.5 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR319a-3p | Translation | 4.0 | 24.833 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR164c | Cleavage | 5.0 | 15.392 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR408-5p | Cleavage | 3.0 | 19.068 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR417 | Cleavage | 4.5 | 9.67 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395m | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395n | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395o | Cleavage | 4.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395p | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395q | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395v | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR395r | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR815a | Cleavage | 5.0 | 17.101 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR815b | Cleavage | 5.0 | 17.101 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR815c | Cleavage | 5.0 | 17.101 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR444b.2 | Cleavage | 4.0 | 15.886 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR444c.2 | Cleavage | 4.0 | 15.886 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR1866-3p | Cleavage | 4.0 | 19.087 | 1 | 22 |
| Osa02LNT0181300.1 | osa-miR1879 | Cleavage | 5.0 | 18.55 | 1 | 24 |
| Osa02LNT0181300.1 | osa-miR2055 | Cleavage | 4.5 | 18.615 | 1 | 21 |
| Osa02LNT0181300.1 | osa-miR2093-5p | Cleavage | 4.0 | 17.928 | 1 | 20 |
| Osa02LNT0181300.1 | osa-miR2101-3p | Translation | 5.0 | 15.347 | 1 | 22 |
| Osa02LNT0181300.1 | osa-miR2919 | Cleavage | 3.5 | 19.948 | 1 | 19 |
| Osa02LNT0181300.1 | osa-miR395y | Cleavage | 5.0 | 17.272 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0181300.1 | 2 | nan | Morphological trait | Panicle/flower | RG139 | CDO686 |
| Osa02LNT0181300.1 | 2 | Hd7 | Physiological trait | Flowering | R3393 | R2511 |
| Osa02LNT0181300.1 | 2 | nan | Physiological trait | Eating quality | RG139 | RZ58 |
| Osa02LNT0181300.1 | 2 | qGRH-2 | Resistance or Tolerance | Insect resistance | C621 | C601 |
| Osa02LNT0181300.1 | 2 | nan | Morphological trait | Seed | C747 | C1445 |
| Osa02LNT0181300.1 | 2 | qPH-2 | Morphological trait | Dwarf | RG324 | RG83 |
| Osa02LNT0181300.1 | 2 | qLTSPS2 | Physiological trait | Sterility | RM1385 | RM240 |
| Osa02LNT0181300.1 | 2 | qLTSPS2 | Physiological trait | Sterility | RM1385 | RM240 |
| Osa02LNT0181300.1 | 2 | qSB-2 | Resistance or Tolerance | Sheath blight resistance | G45 | RZ273 |
| Osa02LNT0181300.1 | 2 | qCHR-2 | Others | Others | RM263 | RG520 |
| Osa02LNT0181300.1 | 2 | nan | Physiological trait | Eating quality | C621 | C370 |
| Osa02LNT0181300.1 | 2 | nan | Physiological trait | Eating quality | nan | nan |
| Osa02LNT0181300.1 | 2 | qDLR2-1 | Resistance or Tolerance | Other soil stress tolerance | RM525 | RM406 |
| Osa02LNT0181300.1 | 2 | qDLR2-1 | Resistance or Tolerance | Other soil stress tolerance | RM525 | RM406 |
| Osa02LNT0181300.1 | 2 | nan | Physiological trait | Eating quality | nan | nan |
| Osa02LNT0181300.1 | 2 | qSDW2 | Resistance or Tolerance | Cold tolerance | RM263 | RM6 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)