© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0015600.1
TCACGAAAGAATACATCATTATTGATAATGGTGGTGCCTGATGCGGCTACAAGGTGAAGACACCAGTTTCAACATAACTGCCTTTCTTTTGCAAGTGCAGTGCGAAAGAATAAAGTGAACGGCAACATTCCTTGCCTAAGAAATTATTTTTTATTCCCTTTGTGATGGGCGAACTAACACTGCCCGATTCTCTCTTTGCTTTTCTTCTCTTAAGTTTTAACTATTTCCACAAGACATATATACATCTATACAATTGTAAAAACCCTGTATGTAACATGTACAGCCTAAAAAAAGATCCTATGGGAAAACTATACCAAACAAGAAGCTAATGCTACTAAAATGTAGTTAAAAAAATTTGGGAGAAGCTAATGGAAAACTTGCGGGGACGTATAATATTCGCTTTCGCCGAAGAATGGTCTCAAGTCCTCTTGGCACATGAACTCCAAAGGGAAGGAAACGAGATGGCCCCTAACGGCCTGTAATTTTTCCATAGGATCGGTGCCTGCCAGATCCCCATCCTTGTGAGTTTCTGTTATCTCTACAGCAACACCCAGGTCAATGGTTGTGTGGCCGATTTTCTCCTTCCGGTGAGCAAATCCTTGCCTAAATTGGGACCTAGAATGGATGTGATCATTGGGAACACACGAGAAGACATTTTGGTATATCTTGGTGTTTGCCTTAGCAGTGCCCATCCAGATGTTGTTATAAGTCAAATCGTCCACAGGATCCATAATTTGACTAACCTCTCCTGGATGAAGGCCAAGGTGTTCTGCCCATAGAGAAAGTCGTAGGCTAAGAGAGAACTTCCCTGCTTCCCAATGTCTTCCATCCATAATTGAACTGACAACCTCTTTATCTTCAATAATCATACCAATCTCAGAATCCCTTGATCCAAGCAAACTTCTGTCATTTATGTTAGCTGATCCAATCAGTGTCATCCGGTCATCAATGATCATCAACTTACTGTGCACATATATCTGATTGGTGACCAAAGGACCACCATCACCTAGTCTGCCGTGTGCCCTGAGCCCATAAAAGGAGATATAATCATGGGCTTTGGAACCAACCACATCATAAAGATTCTTAAGTATTGAATTAGGCCCTCTACAAATGGTCCTGTATTGCCAGTGCATAATTGCTCTAACAGATGCTGCTCCACCGTCATCAATGCCTCCCTGAAATCCAGGTAAAAGCGGTATGACAATTATAACCCGGAAGCACCTTTTCTCCTTTTCTGCTCTAAGTATACGCCTGTATAATGCTTCTAATACACGGTTTTTTATTGTGTCATCTCCTGAAAGACCTGATATGAAAAACTGATTCTCAATGTACACAAAATGTTCTGCTTTTTCGATGAGAGAAAAATAGGCATTGTGGATGCTCCCTTCAATTTGAGTTGTTCCTGCTGACCACGGACCAACACTTCGAACAACCTGACAGCAACAAGTTGCTCGGGGACCAACTTCTCCAATATCAAGCACATAATCGACCTGGTCTCCTCGCTCCTGTGTCTCCCACCATTCGTTATCCATGTGATGCACATTTTGTTTTGAGGTGTCATAATGTCCAATTACTGATGAAACATCTGGGGTACCAAGATTGTCCACAAAACCTTTCATCTGTAAATCCTGAAGAGAAGTATCTTGCTTGGCCTTCCGGTTGGGAATGGGCTGTTTCCAATGGGTTTTATTTGGGTGATCTGAGTGACCATGATTGTTATCTAAACCATTCAGACCTAACTCTCCATTATTTGATGCCTGGTGATCAGGCTCATGAGGCAAAAGCAATGGAATGTCCTGGCATGATGCTGGTGCTTTCAAGGAGCTTAACTTCTGGCCTTTAATATCCTCAACATGAGTCTGTTTACTTACTTCCTCATTTGATTCTTTGATTTTACCCATGTAATGGGGAATTACCATGTGATGTTGAGGCATCAATAAGGGAATTGCTTGCTCATTTGGTGCTTTGTTCCTCTTTGCATAGTTCCAGCGCTGAACAAAATGCCTTGCTATGTCTCGGCATGCAGGACCATAAAGAGCACACTGAACATCATGCCAGGGCATGCGAGGATATTTAGTACGATCAAGCTCATCTTTCATGGTGTCCTCCCAAGAATTTGGCTCAGATTCCCTAGGATTGTAGTAATCTTTTCCTGGCCATATTGAAGGAGGAACATCCACAACTTTATGCTCAGGAGTATCATAACGACCAAAGCATAAATCAAGGCCTCCAATATAGCATACTTGATTATCAACAATAACGATTTTCTCATGATGTGACCATAAGTATATGCCAGTTGAGAAATGATCAGGGTATCGCAGAACTTTAACATTCTCATGAATGTTTAAAAGCCTCTGTTTGCTGTACATGCTGTTAATTTTCAATGCAAGAGAAACTTCCTTGTACAAAAGAATATAGATCTGTACACCTTGCTTTGCCCTTGATTCTAGAAGAATATCAAGTCTAGAGGATTCATGATGGTGGAAAGGGCGTCGAAGGTACAGTTCTGGGCACAGCCACCAATCAGTAATGAATATCTCCGATTTGGCTTCCTCAATTGAAGAAGCAATAGCATTAAACGCAGCTTGCCCATCAAGAAACCATTGTACGACGCTACCATCTTCAGTCAAACCCCTAGGTGGTGCGAATGAACCAAAACGGTGTGGGTGAGACCAACCCTCTGGGGGTCGTCGAGCAGTATTTATTGCAGATACCCAATCTTTCACTTTAGCAGAACTTCTTGTTCTCAATTTTATTGTCCGCCCCCCAGAAGACACCTCAAATGCAAAGTGCAATGGATTATGTTCCTTAATCTCTCTTGCTAGAGTGCTTTGGCCTTCTCCATTTCTATCCATGTGAGGTGATACATCAAAGATAACTATATCCAAAAGCTTTGGATCAAATGGATCTTGGAGCAAAGCTAAAAATCCTGGCTTCAGTACAGCCCAAACCTTCTGCCAGCTACTGTTGCAGAAACTAAAACATCCACACAAACAACATATGTTACTGCTACCTTCGTCAATTTTTGGTAAGTGTCCAACTGTAACATAATCTTCCTTTAGCTTAGGCCCATATTCTGGTAGAAATGATAACAGAGAGACTTCCAAAAATTTACAAACCTCTCTTGAGTTGACAATTTCCATGTTTCCCAAGAAATGGTTCAGATATTCTTGCATGGCAACCTTTGCACGATCAGAAACAGATTGCTGACGACCAAGGGCTGGACGAATGACAGGCAAGACAGCACTAGAGGGAACATTTCTATTTTTGACAGAGTGTTCATCATGTTGTGAAGGAACATGCACGTCATCCGCTTCATCATCATCATGCACAACTGGAATATGCTCCCCAATTCCCAAATTTTGAAGCCATTCCTTGACCTGTTCCTGTTTCTCATGGAATTCCTCAAGAAATGCACGCCTTTTCAACGCAAAATGTAGATATAGAACCTGTGATGCCTTCTTATATAGAAGCCACCTGCTTGTACTGGACCTCGACGGTGTAGGAGAGCAGCATGGGCGTGATGTCCCCGGCGTCGGGCCGCGACACCCCGACGATCCTCGCCCGCGGCAGCTCGTCGAACGCCCCCGCCGACTCGGGAAGCCGGAGGAACGACCCCGCCCCCGCAGCCGCCGCCTCCCCCTCCGGCTCCTGCGGCATCCTCACGTATCCCCCTCCGTACTCCTCCACCTCCTCCTCCTCCGCCTCCTCTCCCTCCCGCGCAGCCGACCGCCCCCCGCTCATAGAGACACAACCCACGACCACGAGATTTTTACTTCCGGAGAGAGAGAGAATCCGGCGAGGTGGGGGGGAATCGGGGGGAGGGCGGCGGTTGGGTGCTCGTTGATCGGATGCGGAATGCAACGGGAAGGAGGAGGAGGGAGGAGGTGAGGTGACGACCGGCAGGTGGAGAGGGAGGGGGGAGGTGGTGGGATCTAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0015600.1 | 1 | 11632960 | T | C |
| Osa01LNT0015600.1 | 1 | 11626030 | A | G |
| Osa01LNT0015600.1 | 1 | 11626895 | C | T |
| Osa01LNT0015600.1 | 1 | 11627293 | T | C |
| Osa01LNT0015600.1 | 1 | 11627423 | T | C |
| Osa01LNT0015600.1 | 1 | 11628154 | T | C |
| Osa01LNT0015600.1 | 1 | 11629307 | A | T |
| Osa01LNT0015600.1 | 1 | 11629718 | C | G |
| Osa01LNT0015600.1 | 1 | 11629782 | A | T |
| Osa01LNT0015600.1 | 1 | 11630452 | A | G |
| Osa01LNT0015600.1 | 1 | 11631197 | A | G |
| Osa01LNT0015600.1 | 1 | 11631714 | A | G |
| Osa01LNT0015600.1 | 1 | 11631888 | G | T |
| Osa01LNT0015600.1 | 1 | 11632046 | T | A |
| Osa01LNT0015600.1 | 1 | 11632259 | T | C |
| Osa01LNT0015600.1 | 1 | 11632384 | G | A |
| Osa01LNT0015600.1 | 1 | 11633204 | G | C |
| Osa01LNT0015600.1 | 1 | 11634240 | A | G |
| Osa01LNT0015600.1 | 1 | 11634810 | A | G |
| Osa01LNT0015600.1 | 1 | 11635111 | T | A |
| Osa01LNT0015600.1 | 1 | 11635404 | A | C |
| Osa01LNT0015600.1 | 1 | 11627765 | A | G |
| Osa01LNT0015600.1 | 1 | 11626452 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0015600.1 | osa-miR5542 | Cleavage | 5.0 | 17.014 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR5542 | Cleavage | 4.5 | 17.15 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR812p | Translation | 5.0 | 16.47 | 1 | 24 |
| Osa01LNT0015600.1 | osa-miR5814 | Translation | 4.5 | 13.722 | 1 | 24 |
| Osa01LNT0015600.1 | osa-miR5337b | Cleavage | 5.0 | 21.668 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR156b-3p | Cleavage | 5.0 | 9.357 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR167a-5p | Cleavage | 5.0 | 21.311 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR167b | Cleavage | 5.0 | 21.311 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR167c-5p | Cleavage | 5.0 | 21.311 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR159a.1 | Cleavage | 4.0 | 16.887 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR159b | Cleavage | 4.0 | 16.887 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR159c | Cleavage | 4.5 | 16.887 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR159d | Cleavage | 4.5 | 16.887 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR159e | Cleavage | 4.5 | 16.887 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR159f | Cleavage | 3.5 | 16.887 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR415 | Cleavage | 4.5 | 8.287 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR1426 | Translation | 5.0 | 14.689 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR1428a-3p | Cleavage | 5.0 | 17.258 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR810b.1 | Translation | 5.0 | 14.727 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR1853-3p | Cleavage | 5.0 | 19.889 | 1 | 22 |
| Osa01LNT0015600.1 | osa-miR1864 | Translation | 5.0 | 16.025 | 1 | 24 |
| Osa01LNT0015600.1 | osa-miR2106 | Translation | 4.5 | 17.527 | 1 | 21 |
| Osa01LNT0015600.1 | osa-miR812k | Translation | 5.0 | 17.663 | 1 | 24 |
| Osa01LNT0015600.1 | osa-miR812l | Translation | 5.0 | 17.663 | 1 | 24 |
| Osa01LNT0015600.1 | osa-miR812m | Translation | 5.0 | 17.663 | 1 | 24 |
| Osa01LNT0015600.1 | osa-miR3979-5p | Translation | 3.5 | 19.053 | 1 | 20 |
| Osa01LNT0015600.1 | osa-miR5071 | Translation | 4.5 | 20.594 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0015600.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0015600.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0015600.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM576 | RM3412 |
| Osa01LNT0015600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0015600.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0015600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0015600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)