© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0183900.1
GTTATGACCATTGTATTTGGCAATACTGCATGCTTGCATATAGGTACACAAGTTCCAAGGCAATGTACATTTCTTTGTAAGAACATTGTGTTGTTTTATTGTCTCTTAATGCATTGACGTACACAACTTCTACGCTTTCTCAGGAAAATAGGAGTATTTCCTAGCAGATATCTCGACAGTTCCAGAGTTGTTGGTCCGGATCACCTATCCTCGAGGACCGCGACCCAAGGCGGCCAGCAAACATTGCAAAATGCATTACCCACTGTTACTTCATCTCTAGAATTATACGTTTTGTCGTGCTGTGATAGGACAATCAAAATTTGGGTAAACGCAATTTTCATGCGCCGGCATGCGTCACGAGAAGAGATGCCTAAAATCTATATACACATCATTTAACATATGGTGTGGAACTGTAAAGATAAGTACATTCCTCAAGCTAACTTCAAAGCAGGGAGTCTTGATTCCTTACTTGTTCTATTCGGCAAAGATCTTCTGCGTTGTTCAGAACATGCAACATACTCTTCGACTGGAGGAAGACTCGGCTCCCCCTTATCATTTTTTGGTACTTGTCCCCTTATCAACTTTGATGCCCAATGTCTTTCTGCTTGCTGGCAAATATCCCTGATATCTCTTCCTGACATCCTGCATCCAATATCCATAATTAGCAAGACAAATGAACTGCATGTGCCCAGGGCAGTCTATCTGTAGTTCAGATTTCAGAACAGAACACATTTCTAGCCACGCGGATCACCAATGATGTTCCCAGATATTACAGTAGTATAGTGATGGTCAGCACTGAGCACATGTAACCTAGCTGAGTCATGGTCACAAATGCCTATATATGTTTTCTGGTATGATCCATAGTATACACGCACATGAATCCATGACTAAAAAGGTACGAGCACTGAACACTCAGTGATTAATGGTGAAATAATAGAGAAGCAAGGAACATATGAACACATGCAGCCTACTCTACAAAATGAAGCACCTCATTTGAATTCAATAAATCAGTTCTGAATAAAAGGGCCAAATAGCTTACTGAAGACAGGCTTTGAAGACGTGTATCAGAGGCACAGATATAATTATAATTCTTTGAATTTCTTATAAGTACTGATCTTTCAACCATGTGTACCCAATATATCCAACGGTAGCGAGCTCCTTCAAGCAGCTTACTGAAGTCAAGCTTTGAAGAGGTGTTTACATTTGTATTAGAGACACAAATATCGTTATACTTCTTTGAACTTCTTGAAAGTACTGATCTTTCAATGGATTATGGAACGCATTTCACCATCTTAGTAATACAATCCAGAGGAAACTTGGATGTTTAATGAAAGATAATTGGTTTCTAAACAAATGTGCGTCAAGTTCAACTAACAGAGTAGGGTAATTCACCCTAGCCCAAAACTGCCAGGAACTACTAGCTGAATCCTGATAGTGGTCGTTTCCAGGACATATTTTTAAACCTGGACTGCATCACACAGCATGACTTTTATATATATTTAACAAAACATAAATATACTAAACCAAAATAACAAGCTTTACAAGACACTGGGTAGATAAGTATCTATAGGACTCCAATGCAACATCAAAATTTGAAGTGCCCAATCAGCTAGACATGAACAGGTAAAATAAATATGCAGACCATGAGCTAGAAGGTTCAGAAAGGACTTACTCTTCAGTGGCCAATGAAAATTGAAACAATTCAGATTTAGTCAAATGTTTTGCATACTGGGCAGATATTTCTGCGCGGGTTTGCTGATCCGGTAAGTCAAAACAAATGATTGAATCAAAACGGCTGATGAGGGCAGGATCAAGGTCTTCCTTTCTATTTGTTGCAGCAATAACCACAACACGTCTATCCTGCTCAAACCCATCAATCTGCCGCAAAATTACTGATAATATCCTTCGTGTAGCTTCATGCATTTCACTATCTCGAGCGCTAGCAAAAGAGTCTACCTCATCTAGAAAAATTATACCTCCATCAGGAAGGTCATTGGCAAGTGAAAAAACAGATCCCAAAAGGCGCTCGCTTTCACCATAATATTTTGACATTATGATTTCCAGTGGCACATATAACAGCGGAACTCCAGCTTGCTTGGCAATAACTCGAGCAGAAGAAGTCTTACCAGTGCCTGGTGGGCCTTCAAACAAAACAGCTCGAGGTCGGTTTGTCTCAAATTTGCATCGTGTAGCACGGGCAATTTCATCGTACACTTCAGGGCTCTGTAAAGCCAAGAGGATAGTGTCCTCTATCTCCCTTTTCTGAGGTTCATATCCAGCAATGTTCTCCCACATAACAGTACCACTACCATCCATTGGAATACTTGAGGTCTCATCAAATCCATAGACCCGAACTCCCATACCCTCTAAATCAGATATAGTTTTTTCCATAGATGGTACATGCTTGGATCTCTGACCATTTCCTTTTCTTGTTGTGTATGACTTATTGCCCTTCCCTGATGATTGCTTAACATCTTTCTGGCCCACTAATTTCAAAACACTTGTCAAAGCTTCAAGCTCTCTCAAACTAAATCCACCACGCTTGATGAATTCAACTTCAGAATATTGAGATCCCACAAGTGGTTCAAATATCAAGACACAAAGATCATCTTCATTGTCATCTCCATTGCTCGTTGTCTTCTTGTGAGGGTTCAACGTTATCTGACGTGCAGCTACACTGTTCCAAGCACGCAGTAGCATCTCAGAGCCGCCACCACCTTGTTCTGCCTCAAGTCCGATATGTGTTACGAGATCAACAATAAGGTCTGATAAGCTACAAGTTGATGGTACATTAAATTTAACGACCACCTTTTGGCCCTTCACTGCCACATCAAATTGCGGGTATGACCCGTGTGGCATCCCTCGGCTCTGAATGAGCTCTATTATCCTCTTCCTCTCCTTATGGGCCAGATCCTCCCCCACCGCCACATCAGAGCTCACAGCCGCATCAGGGTTCACAGGTTTCACAGCCGCATCAGAGCTTACAGCCGAGTCTACAACGCCCTCATTGGCATCGGCGTAGGCCACCGGCAGAGACGCGAGAGCGGCGGCCGCGCCGGCGGCGAGGAAGCCGGCCGTAGTGAACGCCGAAGCCTCACGCGCCCCCGGGGCACCTGGTACCCCATTCAAAAACCCTAAACGTGATCCCAGCGCGTGGGAAGGCGACGCGGCGGCGGGACGGTTCTGGAGAGGCGGCGGTGAGGAGGTAGTGGAAGCCGCCGCCTCGGCCTGCAGCGGCCGGAGGAGGCGGGCCAGCGGGAGGCGGCGGCGGAGAAGCATGGCCATGCCGGCGGCGGAGGCGTGGCTGGGTTTGCGATTTCGAAGCTCGTGTCGGCTCGCTCGAGAGGCTACCGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0183900.1 | 2 | 30958816 | A | G |
| Osa02LNT0183900.1 | 2 | 30958687 | C | A |
| Osa02LNT0183900.1 | 2 | 30959393 | A | G |
| Osa02LNT0183900.1 | 2 | 30959731 | T | A |
| Osa02LNT0183900.1 | 2 | 30959813 | C | T |
| Osa02LNT0183900.1 | 2 | 30960434 | G | A |
| Osa02LNT0183900.1 | 2 | 30961050 | T | G |
| Osa02LNT0183900.1 | 2 | 30961311 | T | A |
| Osa02LNT0183900.1 | 2 | 30962682 | T | C |
| Osa02LNT0183900.1 | 2 | 30964317 | T | C |
| Osa02LNT0183900.1 | 2 | 30964525 | T | A |
| Osa02LNT0183900.1 | 2 | 30964962 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0183900.1 | osa-miR6256 | Cleavage | 4.5 | 18.107 | 1 | 22 |
| Osa02LNT0183900.1 | osa-miR818f | Cleavage | 4.5 | 16.672 | 1 | 21 |
| Osa02LNT0183900.1 | osa-miR395c | Translation | 4.5 | 10.207 | 1 | 21 |
| Osa02LNT0183900.1 | osa-miR395a | Translation | 4.5 | 10.207 | 1 | 21 |
| Osa02LNT0183900.1 | osa-miR395f | Cleavage | 5.0 | 17.471 | 1 | 21 |
| Osa02LNT0183900.1 | osa-miR395f | Cleavage | 5.0 | 15.37 | 1 | 21 |
| Osa02LNT0183900.1 | osa-miR319a-3p | Cleavage | 4.5 | 13.639 | 1 | 21 |
| Osa02LNT0183900.1 | osa-miR167e-3p | Cleavage | 4.5 | 22.183 | 1 | 21 |
| Osa02LNT0183900.1 | osa-miR167i-3p | Cleavage | 4.5 | 22.183 | 1 | 21 |
| Osa02LNT0183900.1 | osa-miR171g | Cleavage | 4.0 | 21.94 | 1 | 21 |
| Osa02LNT0183900.1 | osa-miR172c | Cleavage | 4.0 | 17.95 | 1 | 21 |
| Osa02LNT0183900.1 | osa-miR171h | Translation | 5.0 | 18.691 | 1 | 21 |
| Osa02LNT0183900.1 | osa-miR1429-3p | Translation | 4.0 | 9.744 | 1 | 21 |
| Osa02LNT0183900.1 | osa-miR1861h | Cleavage | 5.0 | 14.601 | 1 | 22 |
| Osa02LNT0183900.1 | osa-miR1861j | Cleavage | 5.0 | 14.601 | 1 | 22 |
| Osa02LNT0183900.1 | osa-miR1862a | Cleavage | 5.0 | 10.433 | 1 | 24 |
| Osa02LNT0183900.1 | osa-miR1862b | Cleavage | 5.0 | 10.433 | 1 | 24 |
| Osa02LNT0183900.1 | osa-miR1862c | Cleavage | 5.0 | 10.433 | 1 | 24 |
| Osa02LNT0183900.1 | osa-miR2866 | Cleavage | 3.5 | 15.545 | 1 | 20 |
| Osa02LNT0183900.1 | osa-miR2931 | Cleavage | 3.5 | 13.735 | 1 | 20 |
| Osa02LNT0183900.1 | osa-miR395x | Translation | 4.5 | 10.207 | 1 | 21 |
| Osa02LNT0183900.1 | osa-miR5155 | Translation | 5.0 | 16.264 | 1 | 24 |
| Osa02LNT0183900.1 | osa-miR5501 | Cleavage | 4.0 | 14.478 | 1 | 21 |
| Osa02LNT0183900.1 | osa-miR5521 | Cleavage | 4.5 | 20.478 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0183900.1 | 2 | Hd7 | Physiological trait | Flowering | R3393 | R2511 |
| Osa02LNT0183900.1 | 2 | qGRH-2 | Resistance or Tolerance | Insect resistance | C621 | C601 |
| Osa02LNT0183900.1 | 2 | nan | Morphological trait | Seed | C747 | C1445 |
| Osa02LNT0183900.1 | 2 | qLTSPS2 | Physiological trait | Sterility | RM1385 | RM240 |
| Osa02LNT0183900.1 | 2 | qLTSPS2 | Physiological trait | Sterility | RM1385 | RM240 |
| Osa02LNT0183900.1 | 2 | qCHR-2 | Others | Others | RM263 | RG520 |
| Osa02LNT0183900.1 | 2 | nan | Physiological trait | Eating quality | C621 | C370 |
| Osa02LNT0183900.1 | 2 | qDLR2-1 | Resistance or Tolerance | Other soil stress tolerance | RM525 | RM406 |
| Osa02LNT0183900.1 | 2 | qDLR2-1 | Resistance or Tolerance | Other soil stress tolerance | RM525 | RM406 |
| Osa02LNT0183900.1 | 2 | nan | Morphological trait | Panicle/flower | RG139 | CDO686 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)