© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0184200.1
AAATTAACCAACTTAATTCATCTCAACAAGAGTTGTACAAAGTGTCTACATTCAACGTTGAGTGATCAGCCATAGCTTAACAAAAGACAACAAAGTGAAACAACGGTGCATCACGAGCGGGTCAGTTCACAGGAACTCCAGAGGTTCACTTCTATTTGCCTCCGCAGCCGGCCATGCCGAGGGACACCGAGGCAGCATCCCCACCACCAAGTAACATCAAAAGGCTTCGCAACAAAGCCGTTGGATGCTTGCAGCTTCACAGGCTCGAGTGAGCCAATTGATCAACTAATCATCGCAAGTGATTCTCTTTCTCGTTGGCGTTCTTTCTCGGCCGAGCAGGAGATCTCGCACGAACGGCAGTGACGTTCTCCTTGTTGCTGCTCATGGATTCGTCAGGCTTCGCGGCGTTGCGGTCCGTGAGAGGGATGCTGTCCACAGCTGGTGAGGACATTGCTCGGGGCAGCCTGAGGGGTATGTCTCTGTTCCGTGGAACCGGCTCGGTGTTCTGCGGCGCCGTGGGTGGGAGAGGTGGCGCTGAAGGGACGAGCTGAACGGTAGACTTGCGCCAATTCTTCCTTTGCTTTGGTTTTGCCCCAGTTTGTTTCACCACACCATTTCCAATATCAGCCAGTGGTTTTCTTGATTTTGTCTCTTGAGCTTCCTTCTCTGACATAGAATTCTCAAGAAGCATGACGCCCTCCTTCACAATTTCCTGAACTTTTGCATCATCCACATCATCTGAAGAAGATACTTCAACCACCCCACCACCTTCCTTTTCTTCCTTCATATCCACCCTATTAGAACACCTGGAGGTAATACATCCACAATCACCCCCACAATGTGAACCTGAAGCTCTACATTCGCATTTTTGGGTCTTGCAGGATGAGTATTTCGAGCATGAGCAGCACTGTGGAGCAAGGTCCAGTGAAGTAGACTTTTCTTGACTGGCCATTTCTGATTTTGCACTTTTTTGTGTAGTACCACTACCCGGGTTAGGATTCAGATGGCTGGACACTGTTTGCCGACGTCTTCTGACCTTCTTCGAACATTCCCAATCTGCATCAGATGCTCCGTAGTCTGCATCAGATGCTTCCCAATCTGCATCAGATCCTTCCGATTTCTCAGAATCTGATATATCCATGTCATCAGACCACAAGAAGCTGTTCTTACTATAATGTAAACTATGGGAAGCTCGAATGCTCTTTCGCATAGCATAATGTTGACCATCTTCAGAACCAACAGTACCCTTTCTGGAAGTGCCAACAGGATTTTTTGCTTCACTTATAGCAGTAAATAACAGCATATTTTGGTTATTCAAATCCTTCACTTGAGTTTCTAATTGTCTGATTCTACCATTAAGTGCAACCACCTTTTCCTTCAGGTCACAAATGAGGTGTTCTTTCTCTTTACACATCACCTCTTTGTCAAGTTGTTGACATCTTGAAGATGATGCCAACTGAAAAAGGTAATTCATTGTGTTCTTCGCATCAGGAAGGGACCTTACATGGTTCCATCTGCCCTTACCATTGAATGCACGCTCTCGCTCCTCCGCTTCAGACAGTTGAGAAGCCATAGACACCATTGCACTAGAGGATGATGACAGCATGTTTTCTAGCGCTGATATCCTAGAACTTCTAGCACTAGGAGACATAGCCTGAGGACACTCTTTCAGCTTTGCTATTTCCTTGGAGATTGCTGCTCTCTCTTGCATTTGTCGCTCGTAGTGCGAACGCAATTCGTATGCCCTTACAGTCACTTCAAGTTCATCATCAATGGCCCGCATTAAAGCCTGAATCCCAGAACCGCTTGCACTTCCATATGTGTCACGGGTGGACTTTTTTGCTTCAAGCGACTCCTTCAGTCTTTTCGTAGCCATTGCTGCTTCTTCAGTTTTCCGCTGTAAAACCATTTTCTGCCTCTGATTTAGGGCCAGGAGTTTATGCATCTCATATTCATTTCTTCTCCCTTCCTTCTTGAGCTGAAGAACTTCCTTTTCCCGAGCAGCCTTCCAAGATCTAAATTGCTCAGATTCTTGCTTAATCTTTTGTTGAAGTTGAACCTTTTGAGATTTTATACGATGAATATCTTCTTGCAAGCGCTTAGCAGCCTCATCACTTCTCTGTTTCTGTCGTATTAGCTGCTGTTGAGCTTCCTGCTTTTTTTTTAGCTCAGAGACCTGAGATTCAAGTGTATTCAGCTTCTGAAGGTAGTTTTCTTTCAGTTTTTGTGCACTCTCATCAGTAGAAGAAGTAATATTGGTTAATGCATGACGAAGTTCCTCAATTTCTTTCTGAAGAGCCTTCTTTTCTTGCTCCATCTCATTTAACTTCTTCTCGTAATGTTGCTTGAGAACAGAGGTGTCACTTTTTGCAAATTCTTTCATCTCCGCCTCCTTTTGCTGAAGTCTTTTATCTAGTTCCTGGAGTTCCTTATCAAGTTTGTCTTGCATGGATGAATGGTCTCTTTCCTTTTCTTCATCGGCTTCACTTGAAGCATCAGGTGTTCCTACTTCACAACCTGAACCCAAGTCATCGAGAAGCAAATCCTTGTCCATGGCAAACCGATCATGTAAATCATTTTTGCAGGTACTAGAGAACTTTTGCCTTGTCAGTTCACTCTCCAACTGCTGAATTTTCAAAATATATCTCTTCATGACCTCCACATCCTGGTCAGTATCAGTATTCTCAATGTCATCCCATGATTTCCCATTGCGTGCTGATTCAATCTTCAACATCAACTGGTCCTTTTCAAGCTGGGCGGCAAGTGCACTTTGTGCCAACTGTTCATATGACAATTCCCTTTCCTTAAGCTCATGGTTAAGCTCTGAGTTTTTTAGCTCAAGTAGAGACACTTTTTGTTGCAGCAGCTGCAGTTCTTCTAGAGCAGCACTCCCACTGCGGGAGAACAGGAGCTCAGTCTGCAACTGCTCCAACTGACTCCTTAATTTTTGCATCTCTGCTGTAACTGGGTCACGGTTTATCACAGCTTTATTTTGAATGTTCCGTGCACGATTGGCATACTTGAGTGTGTTTATGGTTTCTTCTGCATTTGAATCGGCAGGACTAATGCAAGCAATCATAGCAGTTTTACTGTTTCCTCCAAGCGAATCCTGCAGAAGACGTGTTAATTTACTGTCCCGATATGGGACAAATGCTCCTTCTTTTCTCTTCTTTTCATCGCCTAATGCACTAATGACATTGCCAAGGGCTAGAAGGCCTCTATTTATGTGTATTCCTTCTTTAAGCCGTAATCCGTCAGCTCCTGTTCGTTTAGCCCTTTCAGAACCCGCAAGGTCAACTAGATGAAACTTTGAGGACAAAATATCATAGTCATCGTTAGATAACTTGTCAGAGGCACTCGAGGTCTTCTTTTGATCCATTGAAATTGTAAAGATAGCATGAGACCGGCTTGACTGACTATTCATGTTTGTACTTCCTGTTGCACGCGAGGAAGAACCACGTGCCAAAAATGAGGCCATTTCTTCCTTTGTCTTCACCTCAGCCTCTGTCACACCAGCAAGTGTAATGCCGCCATTACCAGTCTCTCTAATCTGAATTGGCACTCTGGCAGGTGCAGTTGCTTTGGCTACAGACCCTGAATCAAGTCTGAGGGCAGCATGACTTGCATCTAGCAAATCAAAGACTTCCTCCTTGAAGATCTCAATGAAGGACACCCTAATTAAAAACTCTGTGCCATCCTTCAATGCATCGGCCTTTTTGAATATTGTCTCCATAACTTGAGGAATTATTCCTCCACAATTAGCTTCACCAGTATAATTAGTACCCATTGTATATGTCTTGCCGGAGCCAGTCTGCCCATAAGCTAGGACTGTAGCGTTGTATCCACGGAATAATGAATCAATGAGAGGATGCACACATTGCTCAAATATTAACGAGGAAGGAGAGCCTGTGCTGCCGAATACATGGTCATACGTGAAGACATGTGGGCCAATTTGGACCTGCGGCTCGCCGGGCGTGACGGTGACGCAGTCGGTGCAGCCGAGGAGGAGCTCCGGCGTGATGAGCGGTCGGATGTTGACGACCACCTTCACGCTGTCCTTCTGCTGCGCTGCCTCGGAACCCTCCATCGGAACCCTCGGTCAGGCCGATCTGGCGGATCGGCGAATCTCCCGGCACGACGAGCAATGCCTCTGGCTCCGGGGATCTGGATGGCGGCGTCGCGGGGGGCTTCGTTAGGGTTAGGGCTTGATCGCCCTCCTCGAGAGAGAGATTGGCGTGGAGAGGGAGAGAGAGAGATTTGCGAAATGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0184200.1 | 2 | 31124800 | A | C |
| Osa02LNT0184200.1 | 2 | 31126111 | T | C |
| Osa02LNT0184200.1 | 2 | 31121305 | A | G |
| Osa02LNT0184200.1 | 2 | 31121464 | T | A |
| Osa02LNT0184200.1 | 2 | 31121558 | A | C |
| Osa02LNT0184200.1 | 2 | 31122235 | G | A |
| Osa02LNT0184200.1 | 2 | 31122298 | T | C |
| Osa02LNT0184200.1 | 2 | 31123982 | A | T |
| Osa02LNT0184200.1 | 2 | 31124257 | G | A |
| Osa02LNT0184200.1 | 2 | 31126144 | T | C |
| Osa02LNT0184200.1 | 2 | 31126341 | T | G |
| Osa02LNT0184200.1 | 2 | 31126484 | A | G |
| Osa02LNT0184200.1 | 2 | 31127411 | C | A |
| Osa02LNT0184200.1 | 2 | 31128962 | T | C |
| Osa02LNT0184200.1 | 2 | 31126864 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0184200.1 | osa-miR5526 | Cleavage | 5.0 | 10.52 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR167a-5p | Translation | 5.0 | 22.762 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR167b | Translation | 5.0 | 22.762 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR167c-5p | Translation | 5.0 | 22.762 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR156l-5p | Cleavage | 5.0 | 14.857 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR167d-5p | Translation | 5.0 | 22.762 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR167e-5p | Translation | 5.0 | 22.762 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR167f | Translation | 5.0 | 22.762 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR167g | Translation | 5.0 | 22.762 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR167h-5p | Translation | 5.0 | 22.762 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR167i-5p | Translation | 5.0 | 22.762 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR168a-5p | Cleavage | 5.0 | 16.584 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR169d | Translation | 4.5 | 15.528 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR167j | Translation | 5.0 | 22.762 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR535-5p | Cleavage | 4.5 | 16.722 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR1428a-3p | Cleavage | 5.0 | 15.633 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR1431 | Cleavage | 4.5 | 20.528 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR2095-5p | Translation | 4.5 | 14.56 | 1 | 22 |
| Osa02LNT0184200.1 | osa-miR2096-5p | Translation | 4.0 | 21.155 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR1863c | Cleavage | 4.5 | 11.565 | 1 | 24 |
| Osa02LNT0184200.1 | osa-miR5080 | Cleavage | 5.0 | 18.593 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR5147 | Translation | 5.0 | 7.82 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR5150-3p | Translation | 3.5 | 24.717 | 1 | 24 |
| Osa02LNT0184200.1 | osa-miR5150-3p | Cleavage | 5.0 | 22.762 | 1 | 24 |
| Osa02LNT0184200.1 | osa-miR5340 | Cleavage | 3.5 | 9.916 | 1 | 23 |
| Osa02LNT0184200.1 | osa-miR5487 | Translation | 5.0 | 18.298 | 1 | 21 |
| Osa02LNT0184200.1 | osa-miR2275c | Cleavage | 4.0 | 17.505 | 1 | 23 |
| Osa02LNT0184200.1 | osa-miR5807 | Cleavage | 4.5 | 12.99 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0184200.1 | 2 | nan | Morphological trait | Panicle/flower | RG139 | CDO686 |
| Osa02LNT0184200.1 | 2 | Hd7 | Physiological trait | Flowering | R3393 | R2511 |
| Osa02LNT0184200.1 | 2 | qGRH-2 | Resistance or Tolerance | Insect resistance | C621 | C601 |
| Osa02LNT0184200.1 | 2 | nan | Morphological trait | Seed | C747 | C1445 |
| Osa02LNT0184200.1 | 2 | qLTSPS2 | Physiological trait | Sterility | RM1385 | RM240 |
| Osa02LNT0184200.1 | 2 | qLTSPS2 | Physiological trait | Sterility | RM1385 | RM240 |
| Osa02LNT0184200.1 | 2 | qCHR-2 | Others | Others | RM263 | RG520 |
| Osa02LNT0184200.1 | 2 | nan | Physiological trait | Eating quality | C621 | C370 |
| Osa02LNT0184200.1 | 2 | qDLR2-1 | Resistance or Tolerance | Other soil stress tolerance | RM525 | RM406 |
| Osa02LNT0184200.1 | 2 | qDLR2-1 | Resistance or Tolerance | Other soil stress tolerance | RM525 | RM406 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)