© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0187400.1
TGGTAATAATAATATTTCCAGAGAGCAACTCTAACCTGGTGTTTGGGGATGTCGACCAGGCATACTACATCTGCAAGTCTCTTCTGCAGCAGGGCTTCAGGCCGCAGCAATTCATCCCATCCACCGCAAAATGTACCACCTCCTTGGCAACATGTCTGCGAGCCATTCCATCACCTCTAGGGCCAGAAGCCCAAGCAGAATACAGTGACTGGATATCCTCTTCCGACAACCCGTTCCGACTGAGATCGAGCACCTTCAGTTGCTTTGCAGAAATGATGGCATCAGCGAGTTCTTGGATGGCATGGCAACCAGAAGAGGAGTTTCTCTGGCATGAACTTGCACAGCTCCCATCTGAGCCGGTCGCTGCACGGGTATCCTCGTAGACTGCCTCTTCGTCTTCGCTATCCGGCACCTCCATCTTATCAGGGTCTATGCGATCGTTCGCTTCAGCATTGGTACGTTGGTTTTGGTCAGTACCTGGTGATACATCCTGCGCGTCTTCATCGTACTGCAATGTTCTCTGTAGTGCCAGGTTTGTGTTCTCAGCAATGCGTAGTTCCTCCAATCGGTCATTTCCTGCTAGTGCTTGAATAATGCCCACGATGCCAGCAAGCCCAAGATTGCATCTATCAAGGGTGAGAGATCTGAGACTGCATTGGGGATTCGAAAGCAATACCCCAATAGCTTCACATCCTGATCCAATGTTAGTTCCACCTAGCAGAAATCCTGATAAGCATGAGGATTGTGCAAGTAGACACAGCTTATCAGCCATTAACTTATTCAGTTTTATACCAGTCAGGCTTAGTTCCGAAAACCTTTTCAGAGAGGCAAGTTTGGAGAGAAGGCTAAGCATTGTATTTCCAGAAATTGGATTGTTGTTTCCTAAGGAGAGATGTGAAAGGACAGACCCTTCATGCAGTGCATCTGCCATCTTCTGAACTGTTCTTGATGTGATAGAACATTGCTCGACATTCAAGCTGTACAGTGCTTTGCACTTCTGTAGGACTGTGAAAAGGTAAGAACCGCATGCATCTGTGAGGCGATTCCCAGACAGATTAAGTACTTCTAATCGATTAGTCATAACAGCACACTCACATATCTGAAATAAAGCAGTTGGACCAAATCGATTACAATGTAAATCCAGTGTCAAGCCACCATATGTTTGGCTTGATGAAGAAAATATTTGTTGAAGCCTCTCAATTGTTTGGTTTCCTAGCATATTATGGGAAAGATCCAACACAGCTATTGTTTTATGTAATTTTAGAGCATCAAGAAAAGGTGTGATCGACAGGTCTTGGAGTCCACAATCAGACACAATAACTTCATCTTCAGAGACTTCAAGATTATATAATTTCTTTAAGAGCTTCTTGTTTGGCGCTTCTGATAACTTTGTGCAGAAATCAACATACAATTTCATCAGCCGCTTTGGCACCCAATCATCAATAACAACATCAATGGACTTCTGTTCAGAGGCAAGTTGATCAATATAATCTCGTGAGTCTGTGTCATCTAGTACCTTCCCACAACACTTGAGTTCCCCAATAATAGGCAACAAACCTTTGGACCTCTTATCATCAGGAATCTGAAGATAGTACACGCATGCCACTTCAACTTTAAGAGACTCAATGCTAAAGGCACCCTCACGTGTACATGCATTTGCGTCCAAGTAAACCAAATGTTCACCAATTTTGAACACCCAGAACTTATGATCAGCATCTGAGGATTGAAGGCCGACAGCATTTTGACCTTGGGGCCGACTGTTTGATGCAAGTGTACCAACCTTGGAACCACTCGCTGCTGGTTTGGACACAGATAACTTCCCTATGCTAGAAGCTCCTAAATCTGGGCCATCATTACCATGACAAACAGGACTACCAGATTTGAATGAACAAATACTTTCCTCAGCAGGGCAGGGAGTGCAGACACTGTCTACTTCTCTGGTCTCAATGGGATGAGAGGTATGCTGATTTCTGTTTCTGTTTGCTGTATTTGCAATTCGCTCTGAGGTAGACAGACTATCTGCTCGACCAGTAAGTGTTCTTTTTGACTGATCAATTTCAGGAGCTTCTTCAGCTTCATCATCTGATATTACAACTCGAACACGCTTTCTACCATAATGGTTGCTAAATGATTTACTTACATCTTCTTCAGGGCTCTCATCCATGCCACATGACCCATCAACATTCTTTGTACTACTATGCATCTTAGATGCTTTGGTCTTAGAAGACCTACTTTTATGAACAAGTGAGGCAAGAACAACATCATCATCAAATTCCTCAGAACTATTATTTGCAATATTCCCATCATTATCCTCTGTATTGAGGATATTATCAGATACATTGCCATCTTCACTTTCAGTTTCTGAGCAATAGTCACTAACTGTATCCCTTGCTTCATGTTGATCAGACATTCTCTTCAGGTTGTCTATTTCTTGCTGCAGTTTTTTCGCTTCTTCAATGTTATCAAATCTGACCATGTGACTGTAATGCATGTTTTCAAGGGCATCTAGTTGCACGTTTGAAAGGCCACCTTTCACAGCAATTCTGTATGCTTCTTCATAAGCTTGCAACGCACCAGCCCAGTCACCACAAGAATCAAGAACATTCCCAATGTTCACTTTTGCTAATGCTTGACCCTCCAAGTTTCCGATTGATCGATACATATTCCAGCTTTTCATGCACCATTTACGAGCTTTGCTGAAGTTTCTAAGCTTTTGGTAAGATTCTCCTATAACCAAAAGAGAGTCGCTCTGTTTTTCCTTGTCATGGAGTTCATTTGCTACCCTCTTTTGTCCTTTCGAAAATTCCTTGAGTTTTGGCCATGCAGTTATCATCCTTGCCTTCTCCATAAGATTAGCCAGCCAAGCATACTGCTCAAGGAGGAGCTTCCTCTCTTTAGATGTTCCACGAGCATTAGAAGTGTCTCTGGCAAGCTTTTTCAGCTTCTGCTCGTATATCTTCATTTCCTCAAGTACTTTGGCTGCTTTGGTAACAGTTTCAATATTCTGATGGATTTGGTCCATTAGTGCATCCTCATCTTCCAAGCACTTTGTTATTTGAAGAGCTTTATTGTAACAAAGCTTTGCATCTTCATACTTTTGAACACGGGAATGGACCTCCCCCAGATTTATAAATCCCTTTGCCTCGCCTTGAGTATGGCGTATTTTTCTACATATCTCTATGTCCTTCTCAATATGGCCCTTGGCTCTGTTCCAGTTGCGTAGTTCAATATAAACATTACCTAGATTGTGATGGAGCCTACTGCGAGCATCGTCATACTGGTGTACCTCTTCCTCATCACATATCTTCAGACCCTGAACAAGTAATTTCTCAGCTTCTTCATAATTATCCAGTTCCAGTTCAAGCATGCCCATATTATTGTACGCATCAATAAGCTCCTTTAGGAAGAGAGACTTCTGAGACGATGGATTCTCCTTTAGAACCCTTGCTAGCTTCATGGATGATTTGAAATATTTCTTGGCATTCCGAATGGCACTGTGATCATTCTCAGATCTTAGAAGGATCTCATAGTAAGTTCTGCCAAGCTGGGTGCTACCTCTCTGCTGCTCAACAAGGTCATCAGCCTCCTTGGCAAGTTGTAAGTGCTTCTTCCCAAGAATGGTCCTCCGCTGGAGTTTGAGGCAGTATTGCCTCCATTGGTGTTGACGGGAGCCTCCTTCTCCTTGTATCCAGTGTTGCCGTTGTCTCCAGTGTTCGACATATTGGTGAAGGTGAAGTAGATGTTGACGAACAGTGAGTAGTCGCGCCTTGCGCTTCCCAAAAACATGATCGCCCGCCCGTCCGTACAAACGTCGCAGCAGCACGTGGTTTCGGAGGCCTACTCTCCCAACGCGTGTGCACACACTCGTCGGGATGGGATTACCGTAGCAGCAACAGCGTTGGAAAATGGATGAAAGTGTGTCTCACTATTCTTGCGGGAGATCAAATCCATTCTCATTTTATAAGAGAAATGGAAGATGAAGAGTAAGAGTCATGGAATAGGAAGAGGAATAGAGCAACTAATTGTCATCAACTAGCCATGAACCATCCTCCACTACACAACCATCAACCAACAATCAATTAGGAGTAATTGATGTAAGTTACCAATGGAATAGGAAGAGGAATAGAGCAACTAATTGTCATCAACTAGCCATGAACCATCCTCCACTACACAACCATCAACCATCCATCAATTAGGACTAATTGATATAAGTTACCAATTCCCTAATCAAATGGATTAATTCTCAAAACTCTTCATCCCATTGATATCCCATAAAAGAATGAATACACATGAATTCCTAGCATAATGAGCCTTAGAATTTATTTGATTTAATTGATTTAAATGGATCAATTACCCAATTAAATCTAACACAAAGTATATGCAGCTTAATCTGATATTCAGCTAAACATTCAAATACTTGACTAAACCATTTATATACAGATGCAACACCAAATGGCCCAAAGCATAGTGGGCGTTGAGATGAGCAAAATTCTCTGATACAGTGGCTTCTACAGCATACCTTAGCACTAACTCACACAGAAACAAACTATAATTGCATATACACTATAAAATGGGACAAACCATAATGCAGATTGGTACTACTACTAGCAAATATTTGTTTGCCGGCAGACCAAACAACTCAATGCGGAAATTCTACTACAACTTAACCTACACCTGCCTATAACGACTCAGGCATCAGAAAACGTGATCTGATCATATGCGTGTGATGCGAAATGGAAGGATCGTCGTAACCTGGTAGGTGAGGGCCTCGGAGGAGTTGCCGAGGCGGAGGTGGACCTCGCCGAGCGACTGGCAGGAGGGGAGGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0187400.1 | 2 | 33286473 | G | A |
| Osa02LNT0187400.1 | 2 | 33287016 | T | C |
| Osa02LNT0187400.1 | 2 | 33287156 | A | G |
| Osa02LNT0187400.1 | 2 | 33287163 | A | T |
| Osa02LNT0187400.1 | 2 | 33288196 | A | T |
| Osa02LNT0187400.1 | 2 | 33288278 | T | C |
| Osa02LNT0187400.1 | 2 | 33289780 | T | G |
| Osa02LNT0187400.1 | 2 | 33290338 | A | C |
| Osa02LNT0187400.1 | 2 | 33290858 | C | T |
| Osa02LNT0187400.1 | 2 | 33291270 | T | C |
| Osa02LNT0187400.1 | 2 | 33292966 | A | G |
| Osa02LNT0187400.1 | 2 | 33293491 | A | T |
| Osa02LNT0187400.1 | 2 | 33294525 | C | T |
| Osa02LNT0187400.1 | 2 | 33294933 | C | A |
| Osa02LNT0187400.1 | 2 | 33294940 | T | C |
| Osa02LNT0187400.1 | 2 | 33295149 | A | G |
| Osa02LNT0187400.1 | 2 | 33295731 | G | A |
| Osa02LNT0187400.1 | 2 | 33292196 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0187400.1 | osa-miR5525 | Cleavage | 4.0 | 13.243 | 1 | 22 |
| Osa02LNT0187400.1 | osa-miR5835 | Translation | 5.0 | 13.167 | 1 | 24 |
| Osa02LNT0187400.1 | osa-miR818f | Cleavage | 4.5 | 20.833 | 1 | 21 |
| Osa02LNT0187400.1 | osa-miR167a-3p | Translation | 4.5 | 13.729 | 1 | 22 |
| Osa02LNT0187400.1 | osa-miR395t | Cleavage | 4.5 | 14.109 | 1 | 21 |
| Osa02LNT0187400.1 | osa-miR395c | Cleavage | 4.5 | 20.201 | 1 | 21 |
| Osa02LNT0187400.1 | osa-miR395a | Cleavage | 4.5 | 14.109 | 1 | 21 |
| Osa02LNT0187400.1 | osa-miR395a | Cleavage | 4.5 | 20.201 | 1 | 21 |
| Osa02LNT0187400.1 | osa-miR395o | Cleavage | 4.0 | 20.201 | 1 | 21 |
| Osa02LNT0187400.1 | osa-miR395o | Cleavage | 5.0 | 8.739 | 1 | 21 |
| Osa02LNT0187400.1 | osa-miR395w | Cleavage | 4.0 | 20.201 | 1 | 22 |
| Osa02LNT0187400.1 | osa-miR395w | Cleavage | 4.0 | 8.739 | 1 | 22 |
| Osa02LNT0187400.1 | osa-miR395w | Translation | 3.5 | 23.645 | 1 | 22 |
| Osa02LNT0187400.1 | osa-miR395w | Cleavage | 5.0 | 14.109 | 1 | 22 |
| Osa02LNT0187400.1 | osa-miR1441 | Cleavage | 5.0 | 12.328 | 1 | 21 |
| Osa02LNT0187400.1 | osa-miR1855 | Translation | 5.0 | 12.041 | 1 | 21 |
| Osa02LNT0187400.1 | osa-miR2863b | Cleavage | 4.5 | 15.165 | 1 | 21 |
| Osa02LNT0187400.1 | osa-miR2920 | Translation | 4.0 | 16.561 | 1 | 23 |
| Osa02LNT0187400.1 | osa-miR2921 | Translation | 5.0 | 15.42 | 1 | 24 |
| Osa02LNT0187400.1 | osa-miR5073 | Cleavage | 4.5 | 10.769 | 1 | 23 |
| Osa02LNT0187400.1 | osa-miR5076 | Cleavage | 5.0 | 20.615 | 1 | 22 |
| Osa02LNT0187400.1 | osa-miR5144-5p | Cleavage | 4.0 | 20.981 | 1 | 21 |
| Osa02LNT0187400.1 | osa-miR5151 | Cleavage | 5.0 | 8.242 | 1 | 22 |
| Osa02LNT0187400.1 | osa-miR5492 | Cleavage | 4.5 | 21.327 | 1 | 21 |
| Osa02LNT0187400.1 | osa-miR5517 | Translation | 4.0 | 15.778 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0187400.1 | 2 | Hd7 | Physiological trait | Flowering | R3393 | R2511 |
| Osa02LNT0187400.1 | 2 | ss2 | Physiological trait | Source activity | RM240 | RM213 |
| Osa02LNT0187400.1 | 2 | nan | Morphological trait | Seed | C747 | C1445 |
| Osa02LNT0187400.1 | 2 | qCHR-2 | Others | Others | RM263 | RG520 |
| Osa02LNT0187400.1 | 2 | qDLR2-1 | Resistance or Tolerance | Other soil stress tolerance | RM525 | RM406 |
| Osa02LNT0187400.1 | 2 | qDLR2-1 | Resistance or Tolerance | Other soil stress tolerance | RM525 | RM406 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)