>Osa02LNT0188100.1

AGCAAAGCAGTTACATATACTTGTAGTGTAATTATATTGCCATATTGGCAGTTACTATCTATAATTTACATCCACAAGAAGGATGAATCATCCCTCACCATTGGTGGGCACATCTATGATACACTTGTCCAATTGGAGTTAGAATCTCAGCCCAAACCACAGACCAGCCCTACCAGCACACTATCTTACAAATTGTATGTACACACAGCTGAAGCTTCTGTCATTGGTGAGCCAACTAGTCTGCTAGTCAGTCCTTGTGTTGTTCCTCCCGCTGGGGAGTGCTACAACCGGTATCCAGTAGATTGAGCTCGCGTTGCAAAACCCAGGAAGATTCATTTGACTTTGTGGTGTTGATCGAGTACTCGCGGAAGTATCCATCATGAGTTATGATATAGACAACAGTCCTTAAAGCAGGAAGTTTAGAAGAATTTTGTGAATTTTCGACCTTATGTACGGCTACACAGCTCTTGATTCCTGCAGGGATGACGTTGTGAATAATGTGATGGTTTGCTGGATCCAAAGCACGAGTTATTGCTCCAGGAATCATTGAACCAAGCAATTTGCTCGTTTGGTTCCTTCGATTTCTGGCAGCATCGAGGAAAAACATGTGCAACGAGCCTGATGAACTTGTGGCAACAAGAACATCGGGCAGATCATCCGATGGTCCGAATGAGAGTGAATATATTGTTGATGGGTATGTTCCCCGCCGAAAACTGTGTGACTTGGTTGCTTGTGCAACGAGAAATACTCTAATAATAGTACCCTTCCCAGAAGCTGTTGCCAGGTACGTGCCATTAGAAGAAAATGCCATTGCAGCTAAGGGAGACTCGTGAGCATCTATCTGGCATATTAATTCAGGTTCTGATGCCTTATAAACTAAAGCAGATCCTTTGGATGTGCTTGCTGGGATGGCCAAATAACATGCTTCTGAATTAGGAGCGAATGCACAAAGACCTTTTGTATTGGGAACTGTTTCAATTTCTTCCAATATAGTAGTGCTGTTTACATCATAAATAAAGGTCCTGTCCTCGTTCTACTTAATCGAACAGCCAAAACTGAAGTCTTAAAGTTCAGATCTTTCTTTGTGACAGCTGCTACGGTGTCGATAAGGCGAAGGCAGCGAGGAGATAGTACAGGCTGTTCACCAGTTCCGACTATAGCAAGAATGTTTGTCCGAAAGTACATTTCCATATTGCCGATTCCACCAATATTCTTCTGGTAGTGGAGCTTCCCTGTATGGGCATCGAAAATCCTGAATCCATCCTTCGTCCCGACATAAAACAAGCTGTTGTCCTGATTGAAGGAGGCGCAACGAATCTGCGGCGGCGGCGGCGGCGACGAGCTGCTCGCCATCGCCCGCGAAGCGACTTCTTCCTCTTCTTCTTGATCTCGT

Explanation	CPC Score
noncoding	-1.10199

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0188100.1	2	33629659	A	T
Osa02LNT0188100.1	2	33630297	G	A
Osa02LNT0188100.1	2	33631575	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0188100.1	osa-miR1440b	Translation	3.5	21.168	1	21
Osa02LNT0188100.1	osa-miR818f	Translation	4.5	23.449	1	21
Osa02LNT0188100.1	osa-miR1866-3p	Translation	4.0	15.367	1	22
Osa02LNT0188100.1	osa-miR5338	Cleavage	3.5	14.897	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0188100.1	2	nan	Morphological trait	Seed	C747	C1445
Osa02LNT0188100.1	2	qCHR-2	Others	Others	RM263	RG520
Osa02LNT0188100.1	2	qDLR2-1	Resistance or Tolerance	Other soil stress tolerance	RM525	RM406
Osa02LNT0188100.1	2	qDLR2-1	Resistance or Tolerance	Other soil stress tolerance	RM525	RM406
Osa02LNT0188100.1	2	Hd7	Physiological trait	Flowering	R3393	R2511
Osa02LNT0188100.1	2	ss2	Physiological trait	Source activity	RM240	RM213

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus