>Osa02LNT0188200.1

CTGATCTAGATTCATAAGGCTCGTCATAGTACCACCAATAACTTGCTACATAGATACATATATATTTTTACAGGAGAACAATCATCACATAATTATACAAGTAAGGCAAGAAGGCTATACTGTTGGCAAGTTTAGGTACATAGGTAGATTTATGTATCGAGGCACACGTTACGAAAGGGTATAGTATTGATTGAAATATACAAGTGGAAGGGTCATACTGCAGATACTATTGTACTGATAGCTTTGACGTTATGTCGGTCGATTTATTATAAAAAGGATAGAAAGTATAAGCATCGAACTGACCTTGCTGTATTCAAAGGGCAAATCACAAGAGATATAGCAAAATCATGGCTCATCCACCTTGAGTTCCTTGAGGTTGTTCATGTATATCTCCATTGCTCTCTCGACGGAACAGCGGCAGTGAGGATAATATCCATCAGACGTAAACTCAAATAGAACTTTGACAGCTCCCTTCTGGATCCACATTGCTCGAGCTAATGGAGCTCCTCCATTGGCCATTTGATCTACCTGGGGATCCTCATCAGCGATGTCTGAACGTGCTGATGAAGCCTAGAGAGGGGGGGGGGGGGTGAATAGACTGTCCCTGAAAACTTAAAAACAAATCGCAGCGGTAAAATTCAAACAGACCCGGAACTTCCTGGTAAGGAACTCCGGAACTTCCGGCCTGCCAGGCCCGGAACTTCCAGTGTTGTTAGGACAGGAACTTCCGGGTTACATAACAAGGATGAAAATCAAATTTCAAAACAGGAGACTAAGCCAATCTTCACAAGATGATGCACAGGTATTCTAAGCAGGGGATAGATCACAGAAACATCCACAAAAACATCACAGAAAGAGACAAGAGCGATTTTTTCCCGAAGTTCGGATCTTGTGATCCTACTCTCCGTTGAGGAGCTCCAAAGAGCTGGGTCTCGATTAACCCCTTGCCTCACTTGTGCGAAAACCCCAGAGGAAATCCACAACCTTCAACCCCAAACACTCCTAGGCAAATTTCTAGAATTGAGTGACCACCAAGATCCAACTCAACCTACTTCTAGAAATCCGCCACAAGTGTAGGTTGCTCTACTTGGAAAACCTTTAGAATCTCAGCACAAGAACTTCATTAACTTACCTCGTTCCCTTTCGGAGGAGAGGAGATCCTTCACAAACTTACCCAGGACATCCACAATATGCAACGGATTCTCGCGGGCGACATCTAACCGTCTAGGAGATCATCTCCAAGAGTAATAAGCACCGAGATGACAGCCCACGAGATATTCCAAGTGCTCACCCAAGATCCTAGTCTTCACACATCTCCAAATCTTCCTCTCTCCCTCTCAATCTCTCTTTCTCACAAGAATTAGGCTCTAGATTGAGTGGAGATGGCAAGAAACACTTAGGAGAGGCTAGCAACAGCTCTAGGGATGAAAAGTGAAAGTGGAATGGCCAAAAAACGAGCTGGAAACGAGCTGTATATGTTTAACGGCTAGGTGACGTCATCTAGCCGTTACTCAATTTTGAACTGGAAACTAGACATGAAGTTCTGGACCTAGAAGACAGGAACTTCCGGATAACACTTAGGAAAATTTCTTTCATCAGACCGGAACTTCCGGACTTGGAAGACAAGAAGTTCCGGACCTGCATTTTTGGACAGATGGAGTATTTGCAAAAATAACTCCTAGGGAAACTTTGACACTTGGTTCACGCTAAGAGCACTTGACATATCTCAGAGCATCACCTGGAATCCCTCTTAATAGTACGGTTTATCCTAAAAACTCGATTGCAATAAATAAACTATCATATACACTTCTCGAGTTCCGGTCCGCTTTGATTTTATACTTTTGGGGGGTCTCCAAGCATCCACCTTCCACACCTTGGACTAATGCATCTGAAAGTAGCTCAATAAACTCATTAATCTCTTAACCACATTTGTCATTAATCACCAATACCCACTAGGGGGATTAATGCACTTCCAATGTCTTCCATAGATGCCATGATTTCTCTTCCAGTATAAAGAAGATTGCTCTCTAAACGATGGCTGACCCGCAGGTACACCAGATCCGAGTCTCCAGAGCGCCAGTTGCGCTCAGCTGCACGGGATGCGGCCTAGAGACTTCGCAACGATCAAACTCTAAGCAGGAAAAACCAGGAAAATGTAAGTGGTGGAGAGGCTGATGGTGAGTCGGTACCCACCATGCACGAATGCAAAATAGCTGAGTAGATCTCACCCGTCAGGATCCATGACCAAATGAGATGTTATTCATCGCTCGATCTGCAGTCGTCGACCCACACCACTTGCATCTGTGTTCACCGATAAGGGGTGGAGAAGAGGGGCCGCCTCAATCCGCCGCCGAGGTTGACACCGTCCCTCAATCTGCCAAGGTTGAGCTCGGCGGCACCGTGGAGCTTCTCATCCAATACGGCGACAAGGAGCGGATGGCGACGAAAAG

Explanation	CPC Score
noncoding (weak)	-0.333434

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0188200.1	2	33648377	G	A
Osa02LNT0188200.1	2	33647480	C	G
Osa02LNT0188200.1	2	33648100	G	A
Osa02LNT0188200.1	2	33648156	G	A
Osa02LNT0188200.1	2	33648171	A	G
Osa02LNT0188200.1	2	33648196	T	G
Osa02LNT0188200.1	2	33648828	A	G
Osa02LNT0188200.1	2	33649795	A	G
Osa02LNT0188200.1	2	33647792	T	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0188200.1	osa-miR5792	Translation	4.5	8.075	1	24
Osa02LNT0188200.1	osa-miR1852	Cleavage	4.0	20.132	1	21
Osa02LNT0188200.1	osa-miR1847.1	Cleavage	4.0	23.45	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0188200.1	2	qCHR-2	Others	Others	RM263	RG520
Osa02LNT0188200.1	2	qDLR2-1	Resistance or Tolerance	Other soil stress tolerance	RM525	RM406
Osa02LNT0188200.1	2	qDLR2-1	Resistance or Tolerance	Other soil stress tolerance	RM525	RM406
Osa02LNT0188200.1	2	Hd7	Physiological trait	Flowering	R3393	R2511
Osa02LNT0188200.1	2	ss2	Physiological trait	Source activity	RM240	RM213
Osa02LNT0188200.1	2	nan	Morphological trait	Seed	C747	C1445

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus