© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0015900.2
AAGTTATCTTTTTACAATTGTAAGACTGGTGTCGCCTACTATGAACAATATGCCAGGGCATGGGCGTAGCTGATTGGTCGACATGTCAAAGAAACATTTACATTAAGAAACTGTATTCCAGCATCAAGGCACTGAATTATCTCATTACTTGTACTGCTCTCTACTCTGACAAACATCCCTATAGGCTTAATTATAGGGCTGGGGACGACGACCACCAACATGGAGATATATAACGACAAAATTTTAGTGACCACACTCAAGATGCAGCTTGGGCAGCACCAAGTTTGTTAGCACCCTTGTCGACTTTCTTCTTTGTCCCCTTCTTTTCAGATTTCTCCTCTTCTTGGTTCTTCATCACTGGCTTGAACTGATAAACAGAGTAAATTACATTCCGTCGAATTTGAGCCATCATATCCAAGAAAAGATTATATCCCTCCAGTTTATATTCAATAAGAGGATCTCGTTGGGCGTAACCCCTCAAACCAACAGCCTGTTGCACAAACTTCAATGCCTGCAAGTGTTCCTTCCAGAGCCTATCAATGTTGCTTAGAATAAGGAACCTCTCAGCTTCTTTCATCAAGCCTGGAGCTTGTTTCTCCACAATCTCAGCTTTTTGGTAGTATGCTTCACGTCCTCGGGTACGAAGGTACTCTTGCAAATCCTCATAGCTTGACGATTTGCCCTCCAACAATTCTGGTGTCAAATCATCTAATAGATAGCAATACTGTTGAAGTTTAGCTATCAGTTTGCTAAGATCCCAATCTTCTCTCGGGGTATCAGGGCCAATGTTTGCCTCTAAAATGTCATCAATTGTTAATTCAGCATATTCCACAATAAGTGATTCAAGACTATCAGACGCAAGAGCGCGTCTTCTTTCTGCATATACTCGATCTCTTTGGCTATTCAATACCTCATCATACTCAAATAATTGCTTCCTGATATCGAAGAAATAGTTCTCAACTTTCCGTTGAGCTTCATCTAGAGCCCTTGTCAGCATCTTCGACTCAATAGGAAGATCTTCGACTCTGAAGGCTTGCATCAAACCCTGTATCCTGTCACCTCCAAAAATTCGGAATATATTATCCTCAAGACTAAGAAAGAACCGAGAGCTCCCAGGATCCCCTTGCCTGCCACTTCGACCACGGAGCTGATTATCAATTCTGCGAGATTCATGACGTTCTGTTCCTACTACATGAAGTCCACCTGCTGAAATGACCTGCTTCTTTTCCTCCTCTGTGTAAACCTTATATTCATCCATTATCTTCATGAATGCACTTCTCAGATTTGCAATTACTTCATCACGAGTTGGTCCCTTCTCACATGAGTAGGAGAGCCGCTCTTCAGCTTCTAGCTCGGTCAATGATTTTTCTCCCCAGGCTTTGACAGCCACTTCAACAGACTCTTTAACATATGATAGTGCGTCTTTTGAAAGTTCACATGGGAACAAACTTTCATTTGTCTTCCATGTCTTCTTAGGTGAGGCCTGCTTTTTAGATATAATGACACCATCCAATGGATCAACAACTCTTGGCATAAGCATCTCACGCAGCTTCAACCTTGCCATGAATTCTGCATTTCCTCCAAGAATAATATCAGTACCACGTCCCGCCATATTGGTGGCAATTGTCACTGCACCAAGGCGTCCACTCTGAGCTACAATTTCTGCCTCCCTCTCTACATTCTCTGGTTTAGCATTGAGGACCTCATGAGGAATCCCTGCTTCATGCAATTGTTCTGATAAGGTTTCACTTTGTTCAACACTAGTTGTACCAACAAGCACAGGGCGACCAACTTTGTTCATTCTTGATATCTCCACGACAGCAGCACGCCATTTTCCATTTGTTGCTCTAAAAACAACATCCGATTCATCCTTTCGTATCATTGGCTTGTTTGTTGGAACAACGGTAACTTTTAGTTTGTATATGCTTTCGAACTCTTGGCTTTCCGTAGCAGCAGTTCCAGTCATGCCACATAGTTTCGGAAACTGTAGAAAGAAGTTCTGATAACTTATTGACGCAAGGGTAATTGTTTCATTTTGTATAGGTACACCTTCTTTAGCTTCAATTGCTTGGTGAAGACCATCACTCCATCTTCTGCCTGGCATTACTCGACCTGTGAACTCATCCACAATAAGCACTTCCTTGCTACGGACAATGTAATTCACATCTCTAAGGAAGAGTTCCTTAGCTTTGATTGCATTCAGAACATATGAAGCCCATTGTTCACGAGGATCGTATAGATCATTTATGTCCAGTATTTCTTCAGCGTCCGCATAGCCTTCTTCTGTAAGTAAAACATTTCTCTGCTTTTCATCAACAGTGTAATGAATATCTCTTTCAAAAACTTCAGCTATTTTTGCTGCTTTGTAATACCGATCACTTGGCTTTTCAGCAAGGCCTGATATTATAAGAGGTGTTCTTGCTTCATCAATGAGAATGGAATCAACTTCATCTATCACACAATAGTTAAAGTTCCTCAGGACAAGCTCATCAACAGTCATTGCAAGGTTATCTCTTAGATAATCGAAACCAAGCTCACTGTTTGTAACATAAGTAATATCACACAAGTAATTCTCCCTCCTTTGCTCAGGTGTCATGTTTTCTGCAGTCCTAGAAATCGGGGAACCTGACCAACCCATTCGCAATCACGTCTTGCAAGATAATCATTTACAGTTACAACATGCACCCCTTTTCCACTCAAAGCATTTAAGTAAGCTGGTAAAATGGCCACAAGGGTCTTCCCTTCTCCTGTTTTCATTTCTGCAATCTCCCCCTTGTGCAGAACCATTCCACCAATCAACTGTACATCAAAGGGACGAAGGCCCAAAACTCTCTTGGAAGCTTCCCTCACAACTGCAAATGCTTCGGGCAGGAGGGAATCGAGGGACTCCCCGGCGCGCGCGCGCTCCTGCAGCTTGGCGGTGCGGGCGCGGAGGTCGGCGTCGGAGAGCGCGGAGACCTCGGGCTCCATGGAGTTGACACGCGCCACGGTGTCGGCGTACCTCTTCCTCGCGGCGTCCCCGTCGTCGCCGCCGGCCCCGCCGAACATGCCGCCCAGCAGGCCCCCCAGCCCGGCGCGCGCGGCGACGCGGTCCCCACCACCCCGCCGCCGCGGGGCCCGGAGGCTCCGTCGCCCGTGCTGGGGGCGGCCGCCGCAGGCGCCACCGAGAGGACGCGGGGAAGGGAGAGAAGACGAAGAAGAAGAAGAGGAGGAGGAAGAGGAAGAAGATGGGTGGGCGAAGCGCAGGGCGGTGGCGCAGGTCGCGGCGGCGGGAGGCGCCATGGCCATCGCCGCGGCGGAGTAGCTCGGTGCTTCGTGTGGCCTAGTGGAGCGAGGCGCGCATGGCCGCAGGCAGAGGAGGAAGAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0015900.2 | 1 | 12236650 | C | T |
| Osa01LNT0015900.2 | 1 | 12237687 | C | T |
| Osa01LNT0015900.2 | 1 | 12237691 | C | T |
| Osa01LNT0015900.2 | 1 | 12235867 | C | A |
| Osa01LNT0015900.2 | 1 | 12235959 | G | A |
| Osa01LNT0015900.2 | 1 | 12236477 | C | T |
| Osa01LNT0015900.2 | 1 | 12236612 | C | T |
| Osa01LNT0015900.2 | 1 | 12240031 | C | T |
| Osa01LNT0015900.2 | 1 | 12240228 | A | G |
| Osa01LNT0015900.2 | 1 | 12242433 | T | C |
| Osa01LNT0015900.2 | 1 | 12242604 | C | G |
| Osa01LNT0015900.2 | 1 | 12242975 | T | C |
| Osa01LNT0015900.2 | 1 | 12243067 | C | T |
| Osa01LNT0015900.2 | 1 | 12243364 | G | A |
| Osa01LNT0015900.2 | 1 | 12243418 | C | T |
| Osa01LNT0015900.2 | 1 | 12243453 | T | C |
| Osa01LNT0015900.2 | 1 | 12244801 | C | T |
| Osa01LNT0015900.2 | 1 | 12245855 | T | C |
| Osa01LNT0015900.2 | 1 | 12245894 | A | G |
| Osa01LNT0015900.2 | 1 | 12246081 | C | A |
| Osa01LNT0015900.2 | 1 | 12246440 | A | G |
| Osa01LNT0015900.2 | 1 | 12239857 | C | T |
| Osa01LNT0015900.2 | 1 | 12240734 | G | C |
| Osa01LNT0015900.2 | 1 | 12242150 | G | A |
| Osa01LNT0015900.2 | 1 | 12247095 | A | G |
| Osa01LNT0015900.2 | 1 | 12237828 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0015900.2 | osa-miR812s | Translation | 4.5 | 16.367 | 1 | 24 |
| Osa01LNT0015900.2 | osa-miR5799 | Translation | 5.0 | 16.367 | 1 | 24 |
| Osa01LNT0015900.2 | osa-miR5816 | Cleavage | 4.5 | 16.136 | 1 | 24 |
| Osa01LNT0015900.2 | osa-miR168b | Cleavage | 3.5 | 21.815 | 1 | 21 |
| Osa01LNT0015900.2 | osa-miR530-3p | Translation | 5.0 | 18.779 | 1 | 21 |
| Osa01LNT0015900.2 | osa-miR1850.2 | Cleavage | 5.0 | 15.977 | 1 | 21 |
| Osa01LNT0015900.2 | osa-miR812f | Translation | 4.5 | 12.065 | 1 | 24 |
| Osa01LNT0015900.2 | osa-miR2105 | Cleavage | 5.0 | 15.133 | 1 | 20 |
| Osa01LNT0015900.2 | osa-miR2868 | Cleavage | 4.5 | 11.699 | 1 | 20 |
| Osa01LNT0015900.2 | osa-miR5149 | Translation | 5.0 | 9.498 | 1 | 22 |
| Osa01LNT0015900.2 | osa-miR5521 | Translation | 5.0 | 11.787 | 1 | 21 |
| Osa01LNT0015900.2 | osa-miR5524 | Translation | 5.0 | 7.943 | 1 | 21 |
| Osa01LNT0015900.2 | osa-miR5524 | Cleavage | 5.0 | 11.185 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0015900.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0015900.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0015900.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0015900.2 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0015900.2 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0015900.2 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)