© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0188400.1
TTCAAACCAGAATGATATTGGTACTTCTCATGCAAAAAAGAAGACAAAAAATCGCACAGCCTCTTATCAGGCTCTTGTTGCAGGCAAAGGTCAAAATCCGAAGTAAGCATTTGACAGTAGATACATACAATTACTCTTCTCTACAGCATTACTGGGAAGGGAACAAGGCAAAGCACAAACAAAATCGTGTGATCAAATATCAACTACACTGCTATGGGTGATACAGCTACAAGCAAACCTTCGTATCATCGATTCATGCTTCTAGTCTCACGATTCACAGCCAGCTTGGTCTGTGCAATTCAAGAGGATTCACAGCTCCGGAAGTATCATTCTGCAATGCTGAAATGACAAAGTTTCAGCTTCTTGACGATATTGATCCTTGTTCTGTGTGACCGTCTGGGCAAAACTCTACATGCGTGGAGTTAAATACAGCAGCAGCAGCCTTGCATTTAACAGTACCTTACGAAATCTGAGAAGACATCCCCAAGACTTTATGGTTCAATCAAACATTTGCTGAGACTTCTGTCTCAGTCTCCTTGCTTTCCTCCGGTTGTGCTGGCACAGGTTCACTCTCCTCTGGTTGGTCATCTGATTGGTCACTGTCTTCTATCGCAGTATCCTTTTTGTTCAGCTCATCCTGCTCTTTTTGTATAGCTATCTTATTGGGAACAAGAACAAGATATATATTCCTTTCCTGAAAATTTTTACTTTCTTCTGTTGCCATCTCACCGACATCATTCTGGAACCGCCTAAGAAGTTCGATAGCTTGTTTTTTATACAAATTTTCCCTGCCTTTTAAGTTTACCATTATCTTGACCTTGTCGCCAGCTTTCAGAAACTTCCTTGCAGCTTTAAGTCTCACACTGTAATCATGAATGTCAATGTTGTACCCCATTTTCAGCTCTTTCAAGCCCATGCGTTTTGCAACAGATCTTTTCTGCTGAGTTCTTTTCTTCTTCTGTTGTTCGTACTTGTGCTTTTTGTAATCTTTCTCTTGGAATAGTCGGAGCACCGGAGGATCTCCATCGAGTGATAATATTGCCAGTATAAGATCATTTTCATCTGCAATCTGCACTGCTTCGCTTACAGATACCACACCAACCATTCTTTTCTCCTCATCCAATAGCCTAACCGTTGAAGCCTCGATTCGCTCGATGTCGAGGGCGGGGTCGTAGTCGGGGTCGGGGCCACGGTCCCTCCTCCCCCACCCGCCGCCGCCGCCGAACCCTTCCTCCTCCTCCTCGTCGCTCTCGTACGACGACGACGAGGAGGCGTTGTACCGCGCCACCACCACGAGCCGCGGCCGCCTGGCCATGAACCGCGCCGACGACGAGGAGCAGGCCATGGCGTGGCCGCCGGCGGCGAGCCTACGAGGGACGACGCGGGGCACGCCCGGCGCGAAGGCGAGGCCGACGACCATGGCCGGCGACGGCGGCGGCGGCGGCGGCGGCGGTGGCGGAGTGGGTGGCCGCCTTATCTGCTCCGTGTCTCCGGTGGAGGTTTTTGCCGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0188400.1 | 2 | 33759248 | A | C |
| Osa02LNT0188400.1 | 2 | 33759370 | T | C |
| Osa02LNT0188400.1 | 2 | 33759394 | A | G |
| Osa02LNT0188400.1 | 2 | 33759670 | G | A |
| Osa02LNT0188400.1 | 2 | 33760851 | T | C |
| Osa02LNT0188400.1 | 2 | 33760878 | A | G |
| Osa02LNT0188400.1 | 2 | 33761310 | G | A |
| Osa02LNT0188400.1 | 2 | 33761510 | C | T |
| Osa02LNT0188400.1 | 2 | 33762019 | G | A |
| Osa02LNT0188400.1 | 2 | 33762063 | G | A |
| Osa02LNT0188400.1 | 2 | 33762354 | G | A |
| Osa02LNT0188400.1 | 2 | 33759323 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0188400.1 | osa-miR5819 | Cleavage | 4.0 | 23.299 | 1 | 21 |
| Osa02LNT0188400.1 | osa-miR6253 | Cleavage | 5.0 | 15.406 | 1 | 22 |
| Osa02LNT0188400.1 | osa-miR156a | Cleavage | 3.5 | 7.353 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156a | Translation | 4.0 | 17.109 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156b-5p | Cleavage | 3.5 | 7.353 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156b-5p | Translation | 4.0 | 17.109 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156c-5p | Cleavage | 3.5 | 7.353 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156c-5p | Translation | 4.0 | 17.109 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156d | Cleavage | 3.5 | 7.353 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156d | Translation | 4.0 | 17.109 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156e | Cleavage | 3.5 | 7.353 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156e | Translation | 4.0 | 17.109 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156f-5p | Cleavage | 3.5 | 7.353 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156f-5p | Translation | 4.0 | 17.109 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156g-5p | Cleavage | 3.5 | 7.353 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156g-5p | Translation | 4.0 | 17.109 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156h-5p | Cleavage | 3.5 | 7.353 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156h-5p | Translation | 4.0 | 17.109 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156i | Cleavage | 3.5 | 7.353 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156i | Translation | 4.0 | 17.109 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156j-5p | Cleavage | 3.5 | 7.353 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156j-5p | Translation | 4.0 | 17.109 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR156k | Cleavage | 4.5 | 13.751 | 1 | 21 |
| Osa02LNT0188400.1 | osa-miR156k | Cleavage | 4.5 | 7.353 | 1 | 21 |
| Osa02LNT0188400.1 | osa-miR156k | Translation | 5.0 | 17.109 | 1 | 21 |
| Osa02LNT0188400.1 | osa-miR156l-5p | Cleavage | 3.0 | 7.353 | 1 | 21 |
| Osa02LNT0188400.1 | osa-miR156l-5p | Translation | 3.5 | 17.109 | 1 | 21 |
| Osa02LNT0188400.1 | osa-miR156l-5p | Cleavage | 5.0 | 13.751 | 1 | 21 |
| Osa02LNT0188400.1 | osa-miR171h | Translation | 4.5 | 10.082 | 1 | 21 |
| Osa02LNT0188400.1 | osa-miR815a | Cleavage | 4.5 | 19.939 | 1 | 21 |
| Osa02LNT0188400.1 | osa-miR815b | Cleavage | 4.5 | 19.939 | 1 | 21 |
| Osa02LNT0188400.1 | osa-miR815c | Cleavage | 4.5 | 19.939 | 1 | 21 |
| Osa02LNT0188400.1 | osa-miR1850.1 | Translation | 4.0 | 19.914 | 1 | 21 |
| Osa02LNT0188400.1 | osa-miR2928 | Translation | 4.5 | 17.442 | 1 | 20 |
| Osa02LNT0188400.1 | osa-miR5501 | Cleavage | 5.0 | 10.817 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0188400.1 | 2 | Hd7 | Physiological trait | Flowering | R3393 | R2511 |
| Osa02LNT0188400.1 | 2 | ss2 | Physiological trait | Source activity | RM240 | RM213 |
| Osa02LNT0188400.1 | 2 | nan | Morphological trait | Seed | C747 | C1445 |
| Osa02LNT0188400.1 | 2 | nan | Morphological trait | Shoot/Seedling | RM250 | RG256 |
| Osa02LNT0188400.1 | 2 | gn2.1 | Morphological trait | Panicle/flower | RM250 | RM208 |
| Osa02LNT0188400.1 | 2 | gw2.1 | Morphological trait | Seed | RM250 | RM208 |
| Osa02LNT0188400.1 | 2 | pl2.1 | Morphological trait | Panicle/flower | RM250 | RM208 |
| Osa02LNT0188400.1 | 2 | sn2.1 | Morphological trait | Panicle/flower | RM250 | RM208 |
| Osa02LNT0188400.1 | 2 | qCHR-2 | Others | Others | RM263 | RG520 |
| Osa02LNT0188400.1 | 2 | qDLR2-1 | Resistance or Tolerance | Other soil stress tolerance | RM525 | RM406 |
| Osa02LNT0188400.1 | 2 | qDLR2-1 | Resistance or Tolerance | Other soil stress tolerance | RM525 | RM406 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)