© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0188600.1
GCGTGGCAATTCTTGCTTTGTATTGGTAGAAATCATCATCATCTTATGTACATCGGTGAGGATTACATGTACCGTGTCTAATGTCATGTGCAACAGTGTAAGCCTAATTAAGCAGAGGTTAATATGTACATGGGGACGCCATCTCTTACCAGATGGACGGAGCAGAGGAGAGGCGGGCTACTTCCACACCTTGACGGCGCCGTCTCTGCTTCCCGAGATGAGCCTGTGGCTCGACAAGTTCACGGAGGCCAGCGCGAGGATCGCGTCTCGGTGGCACCCCGCGGAATCCGCGGCGGCCATGGCGAGCTGCGTCTTGTGGGTTAGCCTCGACGCCGTCGTGGGCTGTCTGCATATTTCCTGCACAACTTGTACACAAGAGCTGGATCTTATATCGTACGTCTCGTCGTTTCCAGCTCCTTTCACCGAGGGACCGGCTATACAGAAGCTTTGCTCAGGCCTGGCCTGATCCCAGTAGCGTATCTTCAAGTCCGTTCCTCCGGTCAATAGGTCCCCTCCTGGCAAAGGAAGCAAAGAGCGGATGCCTGGAAGGCGTGGAGGCGGGTCACATAATTCTTCAATTCGGTAATTATAATTCGCTGGCCGGGTCTCATCTCTGGTATTTGGATGTATTGATGGTGCCTTTGGTACAACAGCTTCATTCTCAGTACTTGCTGTTCTAAATATCTGGTGACGGCTTCCATTCTCAGCATCCCATAGGGTAACTTCATTGCAGCCTGCAGCAACAAAAACCACAGGTCTCCCGGAAGAAGAAATTGAATTCGGTGGTGGTATAAACAAGCACAATTTCTCTATAGGGGTTGCTGGCAAATATTTCCATGAGTTAACGGGAAGCAAAAACCTATTATCCCACAACGTAAGAACGCCTCTTGAAGACCCAGAGATGAACCAATTCCCGCACTGGCCCACTACAAGTGCCGATACATAGCCCTCCTCTGGTGAAGATCTAAATGACCAAGACTCAGCATTGGTCCTTGTATCCCATTTATGTATGCCACAATGTTCAGTGCTGAAAAGAATGGTTGGGCTAAAACTCTCTGTGGAACAGTTCACAACACTGAGAATTGCACCTTCTTTCAAATCTTTCCTTTTTACATCAACAATGCCAGAATACCTTTCGATGACACTCCCTACACCACGTGCGCAGTCAACAGAAAACAAGTGCAATGTTCCATCACTAGCACCAACAATAACTTGGGGAGTACCATGAAGCATTGTCGTACATAGAGCTCGGCTACTACCGAGGCTATATGTTAACCTAGATCTGAAGGCAATGTCCTTTTCCAATTTTCTTGTATCCCATATCTTGACACTTGAGTCATCTGAAGCTGTTACGAAAAAGGTATTGTCGGTTGATACAGCAATATCATTGACAGATAAGCGATGCTCCTGAAGATGTGCCACCAGAACTCCACGGGGTTTCCAACTTGTCTCCAGAGACAATGCTGGTCTGGTGAACGATCCTGAATTATCAGAGTTGGAAATGATATCACCTGGTATAGACGAGCTGCTATTCATTGAGTCACTGATGCTCCCATCTCGGTGCATGTTACTGAAATGATTTTCTCTAGTACGTATGCCTGGAACTGAACTTGATAAACTCCCATGCCGGTCAGATCCCAAATTTGCATGTAGTGCTGTCCCTTGCATGGAGTATAATGGTATTCCTTTAGGTACGCCATCATAAAAGGAACTAGATCCATGTACTGCAGAGCTTATATATGCTGAACTAGCAGAAGAAAAATCTTTAATGTTCAAAGACACATCATTGGACATCTTAGGTCCTCTCAACCTTGAATCATCTTCAATCATGATTGATGAACCACTTTGTACCATGGCAGGATACCTTCCTCCATGCACTGTCAATTCTTTTTTACCATCACCCTTCAGTAAAATGTCTCCTGCATCATGGACATCCTCTAAAGCTTGGTACAAGACTAATTTTGAGACCGGAGGCTTAATACATGAAAGAAGAGCAGTTTCTGATGACAATGATGGTGGCTCCCTGTGTAAAAAATGCTTAAGATGTGGAAAAAGGTATACAAAGGTGTCTACAGGCCCTATGCTCTCACTGCAAGCAACAACAAATCTTACAGCGGACCGTTTAACCCATTGGACTGGATGACACAGCAAGGGAAGAGCCTTTCCAAATAGGCCAACAATCGCCCTTTTCCTCAAATAACCACTTTTGCACATCATAGTCAAGCAGTCAAGTACTTTCACAAGCACAACCTCCATTTCATCACTTAGTGCCTGTTCAAGATAGGGCAAGAGATACTCCTCGACACTTCTGGAACCAATAAAATAGCACACAACAACAATCTGACCAAAATAAACTGCACGGAGCTGCTCATCACGGTCATTTAGAAATGCTGGAAGTATGGGAAGAAGAAAGTCGTTAGTTTGTCTATGTCCGAAGAAGTAACACAGGTAACCTATATCTTGCAGAAGAGCTCTGCGGACATTAGGTGTCTGTTTCTGTCCCATTACCAACTCTTGCACTATTTCATAAATAGATTTTCTGAGTCGTGCAAGTTGACCATTAATGCTATCTTGCTGCCTCTTTACTGGTGATTCTACAGACTGTGATCTGGGAGCTACCATTGATTCATCTAGAGGCCTAGCATCCTCTATACTCCGAGAACGAAGCAGGAATCTGTAGGCTGTCAAGGCCAACTTATAAATGTTGCTGGCATAGCAAACCCTAACACTCTCCTCTGTATCATCTGGGAGCAAAGAGAGCATTGGAAGGATGTACTCTGGGAATATCTTTGCATCACTGATAGGAAAGTCTTGAATAAGACAAAGAACATCAGATAGAGTTTCCAAAGCAGCACAGCGGACTATGGCAGCTGGATCTGAAAGCATCGCAATAACATATGGAATAACCAGCTGTAAGCGACTATCATCATCTATGTATGTAGAACAAATCTTCAGAAGTATGAGACTAGCCCTTCTAAGCTCTGGCTTTTTGACACTTCGTATGCATGAGCAAAGTAATGAGGCAAGCAAAACCATGCCTTCACAGCTCACCTTGTACTCTGTTTGTTGGAAAATGTCAAAATTATAGGTATCTGATTGAGCATCATAACTAGACACTAACGCAAGTAGGTTACTCTTTGAGATCTTCTGCAAATGTGATACACAATTGTTCTGGCCCATCAAACCACTTTCAGTTCTTCCAGCTTGACAAACCTGCTGCAAGGACTGAATACCATTTGCATGGGAAACATTGGGAGTAACAGACCGGTCTCTGTCTTGTGTGATCTTTGTACTTGTACGGTCGTCCTTCTCCAGTTCCTTGAGGAGGAAATTGAGATCTCCAACAATATGCTTATGCTGTGCAGGACTGTTTATCTTAACTACAGGTACACTTTTGGCATATTCTTTTGGTGAATTTACAGTTTGCCCTCCGATGCCCATTTTCCCAGACAGTTCATTATGCACAGGCACAGTAGCAGATCCTTGAATTTTCTCGAGTGTTGAGCCACTTATCATTATATCATGCATCTTTTCAAAATATTCTTGAGTCTTCTCGACCCTAGCATCTGAGTGAAGCGGAACAATATCTGAGAAAAATTTGTGGAGAAATTTCGAAAAATAAACCGGGAATACAACAGATTCATATTTTTGCAAGTAGTTTTTGCATGATAGCCTTTCTTTCGGGTCTAACTGAATCATGTGAAGTACCATGTCACGGATACCAGTATCTTGTATCTTTTCAAGGGTATGAATAGGGTCGTACTGACCACGCCGATAAGCTAGAAGTTGTGAAAGCTCAAAAAGTGGCTGACCTTCTAGGAAAAGTTCAGCAAGAACACACCCAAGAGAGAATATATCCATAGATCGTTGCAAAGGTGCATCTGCTGCGACTTGGGTTTCCGCACCATGCTCATAGAATCTCTCAGGTGCTAGGTAGCATCTTCGCCTTCCACCAGTATCAAAGAAGAACGAAAAATCAGATGGATCATCATCCGGGATGTAAGTTGGTTTGAAAGATGCAAAGTCCGCAAGATATAGCCAATTCCAGGAGGTAACAAGAACATTCTCACATTTTATGTCACCATGACAAATCCCCTTACTATGGCTCTGCTCCACAGCATGGATTAACTGAAAAGCAAGCCATTTCTTCTCAATTTTACTGAGGAAAGGCCGTGTGCTTAGTCGATCATGCAGGTTGCTGTAGAAATACTGCCTAAGGAGATACGCTGCCTTATCCGTTTGCAACCAAACCTGGAAGGGCCAGACGTGGGATCCCTCCAACCCCTCGAAGGCGTTCCTAATCCGCTCCAGCCTCCGCTCATGCTCCTTGAGGTCGAGGGGCTCGCCGGCGCGCTTGAAGTAGACCTTGACGAGGAGCAGCCCCTCGTCGTGCTTGCAGCGGACGGACTTGAGGAAGCGGCCGCGGCTGACGACCTCGACGAGCACGAGGTTGTACGTGGACGGGAGGTCGTGGAGGTAGTACTCCGTCGCCGACGCCTGCGTCGTCTTGGCGATCTTGTTCCCCATCCTCCTCCGGCGCCGCCGCCGCTCGCCGCCGGGCTCCTCGCGCTCGCTCTGCTGTGCTTAGTTTTTGGGTTTCGATTTCGAGGGAGGTGTGCGGCGTCGTTGCGTTTGCGTGGTGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0188600.1 | 2 | 33886044 | C | G |
| Osa02LNT0188600.1 | 2 | 33888029 | A | G |
| Osa02LNT0188600.1 | 2 | 33890956 | A | G |
| Osa02LNT0188600.1 | 2 | 33887583 | T | C |
| Osa02LNT0188600.1 | 2 | 33892453 | T | C |
| Osa02LNT0188600.1 | 2 | 33892806 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0188600.1 | osa-miR5525 | Translation | 4.0 | 15.81 | 1 | 22 |
| Osa02LNT0188600.1 | osa-miR5533 | Translation | 4.0 | 15.631 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR5794 | Cleavage | 5.0 | 20.325 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR5805 | Translation | 5.0 | 18.246 | 1 | 24 |
| Osa02LNT0188600.1 | osa-miR5830 | Cleavage | 3.5 | 16.987 | 1 | 24 |
| Osa02LNT0188600.1 | osa-miR167a-5p | Translation | 5.0 | 24.346 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR167b | Translation | 5.0 | 24.346 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR167c-5p | Translation | 5.0 | 24.346 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395b | Cleavage | 4.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395d | Cleavage | 4.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395e | Cleavage | 4.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395g | Cleavage | 4.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395h | Cleavage | 4.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395i | Cleavage | 4.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395j | Cleavage | 4.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395k | Cleavage | 4.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395l | Cleavage | 4.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395s | Cleavage | 4.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395t | Cleavage | 4.0 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395f | Cleavage | 3.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR160e-3p | Cleavage | 4.0 | 15.378 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR167h-3p | Cleavage | 5.0 | 15.942 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR171c-5p | Translation | 4.5 | 15.953 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395m | Cleavage | 4.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395n | Cleavage | 4.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395p | Cleavage | 4.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395q | Cleavage | 4.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395r | Cleavage | 4.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR1861b | Translation | 5.0 | 13.703 | 1 | 22 |
| Osa02LNT0188600.1 | osa-miR1861f | Translation | 5.0 | 13.703 | 1 | 22 |
| Osa02LNT0188600.1 | osa-miR1861i | Translation | 5.0 | 13.703 | 1 | 22 |
| Osa02LNT0188600.1 | osa-miR1861l | Translation | 5.0 | 13.703 | 1 | 22 |
| Osa02LNT0188600.1 | osa-miR2094-5p | Cleavage | 5.0 | 17.701 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR2864.2 | Translation | 4.5 | 13.509 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR2864.2 | Translation | 5.0 | 24.366 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR2929 | Cleavage | 3.5 | 12.099 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR2929 | Translation | 4.0 | 8.348 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR395y | Cleavage | 4.5 | 21.515 | 1 | 21 |
| Osa02LNT0188600.1 | osa-miR5487 | Translation | 4.5 | 20.842 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0188600.1 | 2 | nan | Morphological trait | Shoot/Seedling | RM250 | RG256 |
| Osa02LNT0188600.1 | 2 | gn2.1 | Morphological trait | Panicle/flower | RM250 | RM208 |
| Osa02LNT0188600.1 | 2 | gw2.1 | Morphological trait | Seed | RM250 | RM208 |
| Osa02LNT0188600.1 | 2 | pl2.1 | Morphological trait | Panicle/flower | RM250 | RM208 |
| Osa02LNT0188600.1 | 2 | sn2.1 | Morphological trait | Panicle/flower | RM250 | RM208 |
| Osa02LNT0188600.1 | 2 | qCHR-2 | Others | Others | RM263 | RG520 |
| Osa02LNT0188600.1 | 2 | qDLR2-1 | Resistance or Tolerance | Other soil stress tolerance | RM525 | RM406 |
| Osa02LNT0188600.1 | 2 | qDLR2-1 | Resistance or Tolerance | Other soil stress tolerance | RM525 | RM406 |
| Osa02LNT0188600.1 | 2 | Hd7 | Physiological trait | Flowering | R3393 | R2511 |
| Osa02LNT0188600.1 | 2 | nan | Morphological trait | Seed | C747 | C1445 |
| Osa02LNT0188600.1 | 2 | ss2 | Physiological trait | Source activity | RM240 | RM213 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)