© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0189500.1
GTTGCCTAATGTTGGAGTTCATTTGACTATAAACCGGCAGGAATTCAACTTCCTTTTTTCATTGCACCTGTGTTTGTACATATATATCTGCATTTTAATTTACATGGGGTTCATACTTCAGTAGAAGGGTCTCAGTGACCGGTCAAAAGTGAAATGAAGTGGTGTGTTGGAGTTACTGTTCATTTATTCCTACTTTAGCTTAATCACATCAGGCTGAGTTTAGATCCAAAGTTTTCTTTAAACTTCTAACTTTTTTATGACATCCAAACTTTTTCACACACATAAACTTTCAACTTTTTCGTCACATCGTTTTAATTTCAACTAAACTTTTAATTTTAGCATGAAAAACACACCCTCAGGTATTTTGTCTGAGAGAGCCAGCCACGCACGCATGCATATTGTTCTTTCTGTCCCCATGCTGGGGGTTGCAGTGCAGTGCAGGCAGGCAGGTTCCCAGGGAGAATTTTCACTGGGATTCCTTCCTGAAGCAGCCATCCAACATCATCATCCTTGTGCTTTTGCTCCCTTTGCCTTTGCCTTCCTTGCAGTGGAATTCATCCAAATTCTTTCTTCTCCTTCTACTCGGATCTCCCTACGAGTGACATGAGCGAGACGACGACAGACAGGGCGAGTGAGATCGATCTAGATTCCGGAGATGAGCAGAGCAGCCTACCTGTCACGGCACGAGCCACTGACACTACATGTGGGCCTGGACCAGCGGTGGGGCCCACGTTTCAGTGACCCCCCCCGTTGGCGCCATGTGCCGTCCCTGCTCTTTTGTTTTGTTGCGATGGATGCATGGTGAGTGAGCTTCCTTCTCTGAAGCGGGCTGGGCTGAGCTGAGCTGAGGTGAGGAAAGAGAGGTGGAGTGAGCAGGAGGGAAAGCTGCCTTCTGTCACTGCCTCACTGCCTGTGGGACTCTCTAAAGCAAAAGCCTATACTTCTCCAGCTTGACAGGATATGGAACTACCCAATCCCCTGCCTCAGCCTTTCAGAGAGTGGGCCCATTAAACTTCCCCCTTAATTTTGCTACAGTATAGTCTTTTTTTTTTCTGAATATGCCATTATATTTATTTTTTAGGGAAACGACGCAGAAGGGCTGCAGGAATATATTAGAAGAAGAAAAAGTTGTTTACAAAAACAGAGCACAAAAGCAAAGCGAAAAAAACCAAAAATTACAAAAAGAGGGACGGCCTCACTGAGATTGGAAAGCTGAATGTCTCAGGTCAAGATCTTGCAGAATCAAGGAAGCCACCCTATCAGCCGATGACAAAGTTTTTTGGAATATACGCTTATTCCGCTCCAACCAGATGTTCTACCAGGAAGTGATCAAACAACCCATAATTCTTTTTTGATGGGGTTTTGGTTGAATGGCTGAAAGAGAGCACCACCAGCTTTTCAAATCCAAGTTGTTAGGCAAAGAGTTGTGATCTAACCCCTTCCAAATACAGATTTTGTTCCACACTTCAGAGATGAAAGAACATTCCTTGAACATGTGAGAAGTGCCTTCAAATGCCTCCCTACAAAGAGGATAGATCCAATCGCTCCAGTGTCACTGAAGAAGGTTTTGCGCAGTTAGAGTTTTTTTATGCAGAACAAGCCAACCCAGAAAACGTTACTTTGGCTCAGCAGGAGCTGACCAAATCTTTTCAAAATTAGTGGTGGGGAAGATGCACTGAAATTGTAGAAAATAAGCGCTTTTCGAGCTATAAACTCCATTATATTTGTGGATACAAAGTTGAAAGGTTGTGTTTAAGAAATTATAAGAATTTTGTATATAGAATGTTTTTTTTCCATAAATCACACAGTTTAGGAGTTTAGGAAGCGTGCCCGTGATAACCTATTTCTCACATTTCAAAATAAACAAATCTAATGCAAGATATAACACATCATAATACTACGAATCTGAAGATAAGTACTGGGATATGTCACGTCCCATACTAGCTGGAGTAGTTTCATTTATTTTGGGACGAAGAGAGAGAGAGAGAGTAGTACTAGGTAGTACTAGTAATCTATAAGAGGGAAAGGACGGACTAGTATGTATGAAAAGTATGGAATTTCTTAAAAAAAGTATGGAATTATATGTATTATCAGTTTATCACATTTGCCACTATTTTTCATCCACTTAAAATTTATTGAACATTTTATGCTGCTTTGTATTTTGGAAAAAAAAAGAGAATATTCTTGGAACATTTTCCCAACTCTCCAAGGCTGCTAATCTTTGTCTTGCCCAAATACATTGCATCCATAAACGTGAAATGAAAATTCAATTTTGTTTTTAACAAAAAAAAAACTTTCTTAGTACTACTTATTTGTGAGCCTGTATCACTCATTGTAGTATTATTGATTTCTATTATATGATATACTATCACTCATTGTGAGGCTGATAATACGTGGGGCCATGCCAACATGTTACAGACGTACGATACAATACCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0189500.1 | 2 | 34284914 | T | C |
| Osa02LNT0189500.1 | 2 | 34286551 | T | C |
| Osa02LNT0189500.1 | 2 | 34286604 | G | A |
| Osa02LNT0189500.1 | 2 | 34286556 | T | C |
| Osa02LNT0189500.1 | 2 | 34284965 | T | C |
| Osa02LNT0189500.1 | 2 | 34285000 | T | C |
| Osa02LNT0189500.1 | 2 | 34285755 | A | G |
| Osa02LNT0189500.1 | 2 | 34285868 | T | A |
| Osa02LNT0189500.1 | 2 | 34286334 | G | A |
| Osa02LNT0189500.1 | 2 | 34286699 | T | G |
| Osa02LNT0189500.1 | 2 | 34286325 | A | C |
| Osa02LNT0189500.1 | 2 | 34286601 | T | C |
| Osa02LNT0189500.1 | 2 | 34285049 | G | C |
| Osa02LNT0189500.1 | 2 | 34285870 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0189500.1 | osa-miR5788 | Cleavage | 3.5 | 17.13 | 1 | 21 |
| Osa02LNT0189500.1 | osa-miR2873c | Cleavage | 5.0 | 9.155 | 1 | 21 |
| Osa02LNT0189500.1 | osa-miR2873c | Translation | 5.0 | 13.95 | 1 | 21 |
| Osa02LNT0189500.1 | osa-miR6254 | Translation | 4.0 | 21.903 | 1 | 21 |
| Osa02LNT0189500.1 | osa-miR7695-3p | Translation | 5.0 | 21.787 | 1 | 21 |
| Osa02LNT0189500.1 | osa-miR5079b | Cleavage | 4.5 | 12.618 | 1 | 22 |
| Osa02LNT0189500.1 | osa-miR156b-3p | Translation | 4.5 | 23.926 | 1 | 21 |
| Osa02LNT0189500.1 | osa-miR171f-5p | Cleavage | 4.5 | 17.799 | 1 | 21 |
| Osa02LNT0189500.1 | osa-miR816 | Cleavage | 4.5 | 15.829 | 1 | 20 |
| Osa02LNT0189500.1 | osa-miR1435 | Translation | 3.5 | 15.628 | 1 | 20 |
| Osa02LNT0189500.1 | osa-miR1849 | Translation | 5.0 | 10.91 | 1 | 21 |
| Osa02LNT0189500.1 | osa-miR1850.1 | Cleavage | 5.0 | 8.43 | 1 | 21 |
| Osa02LNT0189500.1 | osa-miR1850.1 | Cleavage | 4.0 | 15.114 | 1 | 21 |
| Osa02LNT0189500.1 | osa-miR1852 | Translation | 5.0 | 15.86 | 1 | 21 |
| Osa02LNT0189500.1 | osa-miR1866-5p | Cleavage | 5.0 | 15.366 | 1 | 24 |
| Osa02LNT0189500.1 | osa-miR1869 | Cleavage | 3.5 | 21.66 | 1 | 24 |
| Osa02LNT0189500.1 | osa-miR1320-5p | Cleavage | 5.0 | 12.672 | 1 | 21 |
| Osa02LNT0189500.1 | osa-miR2095-5p | Translation | 5.0 | 15.47 | 1 | 22 |
| Osa02LNT0189500.1 | osa-miR2873a | Translation | 4.5 | 13.185 | 1 | 24 |
| Osa02LNT0189500.1 | osa-miR2879 | Translation | 5.0 | 9.541 | 1 | 24 |
| Osa02LNT0189500.1 | osa-miR1862f | Translation | 3.0 | 11.986 | 1 | 20 |
| Osa02LNT0189500.1 | osa-miR3981-5p | Cleavage | 4.0 | 16.045 | 1 | 21 |
| Osa02LNT0189500.1 | osa-miR5079a | Cleavage | 4.5 | 12.618 | 1 | 22 |
| Osa02LNT0189500.1 | osa-miR5080 | Translation | 4.5 | 9.962 | 1 | 21 |
| Osa02LNT0189500.1 | osa-miR5153 | Cleavage | 4.5 | 13.429 | 1 | 24 |
| Osa02LNT0189500.1 | osa-miR1862d | Cleavage | 2.0 | 11.986 | 1 | 24 |
| Osa02LNT0189500.1 | osa-miR1862e | Cleavage | 1.5 | 12.273 | 1 | 24 |
| Osa02LNT0189500.1 | osa-miR2873a | Translation | 4.5 | 14.056 | 1 | 24 |
| Osa02LNT0189500.1 | osa-miR1862g | Translation | 3.0 | 11.986 | 1 | 20 |
| Osa02LNT0189500.1 | osa-miR5079a | Translation | 5.0 | 11.986 | 1 | 22 |
| Osa02LNT0189500.1 | osa-miR5079b | Translation | 5.0 | 11.986 | 1 | 22 |
| Osa02LNT0189500.1 | osa-miR1442 | Translation | 4.5 | 8.549 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0189500.1 | 2 | Hd7 | Physiological trait | Flowering | R3393 | R2511 |
| Osa02LNT0189500.1 | 2 | ss2 | Physiological trait | Source activity | RM240 | RM213 |
| Osa02LNT0189500.1 | 2 | nan | Morphological trait | Seed | C747 | C1445 |
| Osa02LNT0189500.1 | 2 | nan | Morphological trait | Shoot/Seedling | RM250 | RG256 |
| Osa02LNT0189500.1 | 2 | gn2.1 | Morphological trait | Panicle/flower | RM250 | RM208 |
| Osa02LNT0189500.1 | 2 | gw2.1 | Morphological trait | Seed | RM250 | RM208 |
| Osa02LNT0189500.1 | 2 | pl2.1 | Morphological trait | Panicle/flower | RM250 | RM208 |
| Osa02LNT0189500.1 | 2 | sn2.1 | Morphological trait | Panicle/flower | RM250 | RM208 |
| Osa02LNT0189500.1 | 2 | qCHR-2 | Others | Others | RM263 | RG520 |
| Osa02LNT0189500.1 | 2 | qDLR2-1 | Resistance or Tolerance | Other soil stress tolerance | RM525 | RM406 |
| Osa02LNT0189500.1 | 2 | qDLR2-1 | Resistance or Tolerance | Other soil stress tolerance | RM525 | RM406 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)