© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0016300.1
AGAGGAAAGAAGCTTCAGCTTCATTACAACAGAAAAGAAAGTAGTATACAACACTGAGCTATTGCAGAGAAGATTAGGCAAAACTGAAGCTTTTACTCACATGGAATTTACAGCATGTTACATCGCTTTGGCGGTATTCTACAATAACAGCTGATGAAATTGGGTGGGGTATATGAGCAAGGCACCACCAAAAAGAAAGTTAATTCAATACAAGGAAGAGAAGTGTCACTAAAGAAAAATAACTCAATGAGGAAGAGATGATTACCGCTACTACAGGCAACTAGTGGCAGATTTTGAGAAAACCATCTTCTGTTCCAACAACAAACAATCTTGACAAAGGAAGCACAGAAATAGTCGAAAGAACAGACATGTTTTTGTATTTCACTCCTCGATCAGACGAATAGAGGTACTGAAATGTGAGCTGCTGATGTCCAATCTCACTTGTTGGCCTCGAAAGGGAAGTTAATGCAATTTTGTTTCTTGAAACTGATACCATATCCTGACCCCACGCAGAAAAGTTAATGATCCCATCTGAGTGACTTCTGTAAATGTTTGACTGGGTTGATAGATTCCCTCTTAGGTCCCAAACTCGAAGAGTCTTGTCAAGGGAGCTTGATACAATCAAGTGATCCTCTGGTGCTGCTAGTTTTGTAATGTGACCATCATGTGCTCGCCAAACTGCAACAATATTTCCACTACGTTCATCAAGCAATCGACAATAACCAGAACTTAAACCTGCTGCTATCCAGGAAGATGAAGCTACAGTGCTGTCTTTCTTCAGCTTGTCTGAGGCACATGAGCAAATAGCTGATACAAGCGATGAGAAAGAGATTTCATCTGAGTCACTCTTCCATAAATGCAGCTTCTGATCTTGAGAAATATCAATAAATCTGATTGAACCATTTCCCATACCAGCAACAAGTTTATCTTTGGATTCCATGTAATGCATAGTTGTATATAAACTACCACGAAATGCATTTGACAATATTCCACCTGAGAGGGCATCCTGATTAAGCATGTTTGCCTGCTCAATAGATGCAGTTTGCTGAGGAAAGCTAATAGATGACTCCGTATGAACTGCTATGAGTTTTCCTGTCTGTGCATTCCATATATGAATAGTGCCATCACAAGATGCCACTTTTCCCGTAATTGACAGGATGCAGATAGAATTGACAACCTCTTCATGCCCATAATATCCAGAACTGCAGTTCATATTTGGTAACTCCCACTTCTGGATACTTCCTTTAAAACCAGGACCAACTCCACCAGTAAAAATTGTACACTCATCATCATGAACAGCTAATGACCGCAAAGCCCCAGGGTGGGCCCGAGCTGAGTAAAGGACTGAAGCTTTGATCTTCCATGGAAGTTCATCCTTCATACCAGCACTACGTCCAAGAAAATCTGGTGCCCAACAATTACGATCAGGACTTGGGAACCAAAACCATGGTTGATTTCCAGAAGTTGAGGCACACAAATTGTCACTAGATGACCCATGCTCAAGCCTAGATCCTTGATTGGAGACTGTCATATTCCGACCATTTTTACCAATCTCTGCAACAAGCTTTGTAGGAGCAGGCTCAGATGAGGTATAGTTCCCAGACCGAAACCTTTGACCTTTCATGTTTTCACTACTGCCAGAATGGTCAGTGGAAGGCTTCCAGCCATACAATCTTTGAAGAGCTTGCTCTAATAGAAACCATGTAGAGTAACATTCACGGAGCTTCTCTATTCCAACAAGTGCTGCTAAGAAAGGATACAAGAGAAACACGAGATCAATCCTAGATTCCATTTTAGCTGGCTCTGTTTTGTTTCCATCGAAGAACTTTAACCCTTTTGTAGGAACGCTAAGACCAGAAGACTCATGAGAGAATGCTAGTTCAGCAAAAAGCTCTTTTAGATGTGGAAGCACATATGTAGCCGTATTTTCTGGTCCAATTTGTTGACAAAGATCAACAAATGCACTAGCAGCCACCTGAATCACACGAAGATTCAAATGAACCTGCGTAAGAACCTTTATATGAAGACAGACTTGGTCCTGAAGAAGCTCTCTAAGAATTGTTTTGACAGGTAGAATTGATACAAGGCCTTCCAATGCAGATAAGCCATCCATGAGGGCAAAAGAATTCCAACTGTGTTGTGGCTCAGGCTTATTGATCTTTGAGGATTCAATGCATGAGAGTATAACATTCCTAAGCAAGGGAAGAATTTGCTTGACAGTAAAACTCTCTCCAAGAAGTCCACCTATCCTGACCAACGTGTCAATTCCATCGGGACATAAACCTTTGCCAAAACACTGGATTATTGGTAAAATTGCCTGATTAAAAGTTATTGGTATCCCTAGTTCCTCACTTGAACCAATTAAAACAATGGACGCAGAAGAGGCAGTAATCTTGTTAGGTGAATTGTACAGGTTCATGATCACCAAAGGATGCACCTTCTCAATATAAGTTTGTTTTCCCAATTTTTTCCACAACTCTCGCACAAATGAATCTTGAAGTAAGGAAACCTTCAGATGTGAATATTCTGGTGCCTGTAAGATCTTCTGAATGATGTGAAGTATAAGATCCTTTGTTGCTTGGACACTTAAGCACTTCACAAATTCTTTAAGCAGAGCCAAGGCAAATTCAGTGTCAATATATGACAAAGATGGTGAAACAAGAGGTAGGCAGTAGGGTGCACACATTTCGGCAGCACATTCCCCCATAGCTCTAAGTGTTCCTTCACTTGCAAGCTTAGCAACATACTTAAGGCGATCCCTAGGTGTACATATAAGTTGAAGTGGAGCAAGAAACATGTATGCAGATCGAACGGATGGAGGAAAGTATTGTGATTCCAAAAGGTGCTTTGCCAGTGGCCTCCTTTTCCATTCCCTCTGTATGCATGACTCAACAATAACAGCAACATGGATAGGCAATTCTTGAATTGCTCCTGGCAGTATGCCAGTTTCTTTATATGCAGATAGGAGATCAGCATCAAAAAGTGGTCCGTGCAGATAGATTTCTGCCAAGATACACCCAACAGAAAATATATCATTTGCATGATACTCATTAACTGAACAAGACTTTTGCTTCCAACGCAACAGCTCTTGATAACCCGTTGGAGAACTATCATCGGATTCAAAGCATTCAAGAAAAGAACAAAAATCAAAATCAGGCGCCACTGATAGCACACTCTCTGGAGGCACAATATACTGATTTGAACAAGGGCTCTTATTATATTTGACTGAAGAGCAACAAGAAGAAGAATCATTAGCATAATCATATATTGGACACAAATGATTTTCAAGCTTCATAAACACGTTTGCTTGCTCAAACTCTTCCAGATAATCAATTTGTGATGACATAGCTGGAGGAATGTGGTCCTTTAATAGTAGACCAGTAGTCATGCTACTTGATCCCCCCTGGCATTTAGCACAAGATTCCATTTTATTATGATAGGTAGAGTGAGGTGTGCTAGTAAGTCGCTTAGGATGCGGTTTCGTGAAAAGTTGGCGCCGCCCAGTTGATTTAGGCTTTGCTGGATCACTAGGAGGCAACATTACATTCTTGGCTTCAACAGATGACTCCCCAGAAAGTTTATACCCAAAGGTTATGTCAATCCAATGATGCAGTTGTCGCGAGACTCGATCACTCTCTAAAGCATTCCTGTGCAGACAAATAAATTCCTCTGCAGAAGTCACCCAGGAAGGTAAAGCCAAATTGCTCATTTCAGAATGAAGAGAGACAAATATCCGAGGATCGCTATAGAATTCTGGAATGCACTCATCAGGAGTCCATTGGTATAGCCTTTGCATGTTAGATGGGTATTCGTTGGGCTCATAAACAGAACGCACAGCAGACCTCAAGATGTTCTTTGGTAGCCTCCTTGCTTTATAACTGCAAACTTTTGCCAGCCGCCATTTACTTTTGGTGAGGTCCCTCCAACCAATATCAGAATTTTCATCAGGCCTCACTGTGAAATCTATTACCCAAGGCATTACTGTGTGAAAAGCTGGATCACCCCATCTTCTACCAGCTAACTTATTTAAGACAAGAATATATTCGTAGTTGCTCAATTCACCCATCCACCATCGCTTAGAGTAAGACTGCCAATCTAAGGATGATGACAGATTGAAACCAGAATAAATGGCCCTCGAAGAACAATCCTCCTCAAAACAACATAGGGTAAGAGCTGGACGCTTTGACTCAGCAAAACCACAATTCTGTTTTACAGGACATATATCACTTATGCTCAGGTAAGGCCATAAAGAATCTGACATAAAGATGGCTGAAGGTTTTAGATTACCATGATGAACTCCAGAATCATGAAGATACACCAAAGCAGATATTATCTGGTAGATGAGAAATCTAATATGCCAATCTGACCACAATGCCTCTGGACTGTAGTGCATGATATTTTCCAAGGTATATGGAGACTTTGGATGCAACATGTAGCAACAATCATATGTTTCTACAATGCCTAAAACAGGTAAGATGTTGGGATGTCTGACATGGCCAGAAGGATGTATATCATTGAACTCTGAAAATCCAGTAAAATTGAGAAAATCTAAGCCTCCTGAGCCAACAATTTTATTTTCAGACAAAAGATTTAAAGAATTCATCACACTCTCTTCTGTTGTCAAATTCAAGTAACTTGAGATAAGCTCTCTAATTTCAGAAGTGGCTGCTCTAGCAAGATATCGAGTAGGAGTTAACTTAGTAATTGTGTTTATGATTGATTGCTTCCTGTGGTTGTCATCAGCATCTGTGCTTTCCTTGCCCTGCAGATCTATCTGACTTCCATTCTCCAAGGAATTACTCTCACATTCTTGAATATCCAAAAGTTCCTTGCCACCCTGTAGTCCCACCAATACAAAATAACCAGTGCTCTGCTGGCTCCCATTACATTCCTCAGCCCCATCAGATGCAATCTGGACGACGGCGGCGGAGGCGAAGGGGAGAGGGGACTCGTGGAGGCCGTGCACGAAGGAGAAGCAGGAGCCCGGGAGGCCCGAAAGGATTCGACGCTCCAGGCACTCCGGGCACGCCGCCCCCGCCTTCTCCGGCGAGCAGACCATCGCCGCCGCCACTGAGGCCTGGATCGAAAGACCAGAAGAGTCCTAGTGCTTCCGAATTTGGACCGAGGCGCTGAGCCGTGGAGCCCTAGGGTGGTGTGGAATCGGGCCGAGGCGGCAAACAACCGGCGACTAGCGAGCGGTGTTCGACGGCCGCAGCCTCCGCGGTAGCGCCGCCGCCTCCGGCGTCGGTCGCCGTCGTCGGAAAAGGAGAGAAGAGAAGAATTCTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0016300.1 | 1 | 12588097 | T | C |
| Osa01LNT0016300.1 | 1 | 12585406 | A | G |
| Osa01LNT0016300.1 | 1 | 12585836 | A | T |
| Osa01LNT0016300.1 | 1 | 12587097 | A | T |
| Osa01LNT0016300.1 | 1 | 12587184 | G | C |
| Osa01LNT0016300.1 | 1 | 12587205 | G | T |
| Osa01LNT0016300.1 | 1 | 12587339 | C | T |
| Osa01LNT0016300.1 | 1 | 12587842 | A | C |
| Osa01LNT0016300.1 | 1 | 12588019 | T | C |
| Osa01LNT0016300.1 | 1 | 12589239 | G | A |
| Osa01LNT0016300.1 | 1 | 12589380 | T | C |
| Osa01LNT0016300.1 | 1 | 12589573 | C | A |
| Osa01LNT0016300.1 | 1 | 12590848 | G | C |
| Osa01LNT0016300.1 | 1 | 12591052 | G | A |
| Osa01LNT0016300.1 | 1 | 12591886 | G | A |
| Osa01LNT0016300.1 | 1 | 12592355 | A | G |
| Osa01LNT0016300.1 | 1 | 12592826 | G | A |
| Osa01LNT0016300.1 | 1 | 12593334 | C | T |
| Osa01LNT0016300.1 | 1 | 12593922 | A | G |
| Osa01LNT0016300.1 | 1 | 12593988 | C | A |
| Osa01LNT0016300.1 | 1 | 12594558 | T | A |
| Osa01LNT0016300.1 | 1 | 12593801 | T | C |
| Osa01LNT0016300.1 | 1 | 12592755 | T | G |
| Osa01LNT0016300.1 | 1 | 12593739 | C | T |
| Osa01LNT0016300.1 | 1 | 12590588 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0016300.1 | osa-miR5543 | Cleavage | 3.0 | 13.021 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR5543 | Translation | 4.5 | 20.167 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR5543 | Cleavage | 4.5 | 15.886 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR5788 | Cleavage | 5.0 | 15.809 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR5790 | Translation | 4.5 | 13.357 | 1 | 24 |
| Osa01LNT0016300.1 | osa-miR5820 | Translation | 5.0 | 16.925 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR5820 | Cleavage | 5.0 | 16.424 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR5837.2 | Cleavage | 5.0 | 16.967 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR5512b | Cleavage | 4.0 | 13.343 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR156a | Cleavage | 4.0 | 7.654 | 1 | 20 |
| Osa01LNT0016300.1 | osa-miR156b-5p | Cleavage | 4.0 | 7.654 | 1 | 20 |
| Osa01LNT0016300.1 | osa-miR156c-5p | Cleavage | 4.0 | 7.654 | 1 | 20 |
| Osa01LNT0016300.1 | osa-miR156d | Cleavage | 4.0 | 7.654 | 1 | 20 |
| Osa01LNT0016300.1 | osa-miR156e | Cleavage | 4.0 | 7.654 | 1 | 20 |
| Osa01LNT0016300.1 | osa-miR156f-5p | Cleavage | 4.0 | 7.654 | 1 | 20 |
| Osa01LNT0016300.1 | osa-miR156g-5p | Cleavage | 4.0 | 7.654 | 1 | 20 |
| Osa01LNT0016300.1 | osa-miR156h-5p | Cleavage | 4.0 | 7.654 | 1 | 20 |
| Osa01LNT0016300.1 | osa-miR156i | Cleavage | 4.0 | 7.654 | 1 | 20 |
| Osa01LNT0016300.1 | osa-miR156j-5p | Cleavage | 4.0 | 7.654 | 1 | 20 |
| Osa01LNT0016300.1 | osa-miR166e-3p | Cleavage | 5.0 | 21.499 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR156l-5p | Cleavage | 3.5 | 7.654 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR169d | Translation | 5.0 | 16.206 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR169p | Translation | 5.0 | 10.652 | 1 | 22 |
| Osa01LNT0016300.1 | osa-miR171h | Cleavage | 4.0 | 16.646 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR390-5p | Cleavage | 4.0 | 21.126 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR535-5p | Translation | 5.0 | 8.211 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR535-5p | Translation | 4.5 | 16.522 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR1435 | Translation | 4.0 | 8.449 | 1 | 20 |
| Osa01LNT0016300.1 | osa-miR1440a | Cleavage | 5.0 | 16.739 | 1 | 20 |
| Osa01LNT0016300.1 | osa-miR2097-3p | Translation | 4.0 | 6.339 | 1 | 22 |
| Osa01LNT0016300.1 | osa-miR2870 | Translation | 5.0 | 9.492 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR5160 | Cleavage | 5.0 | 20.188 | 1 | 22 |
| Osa01LNT0016300.1 | osa-miR5499 | Cleavage | 5.0 | 18.571 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR5512a | Cleavage | 4.0 | 13.343 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR2275c | Translation | 4.5 | 8.311 | 1 | 23 |
| Osa01LNT0016300.1 | osa-miR5515 | Translation | 4.0 | 14.082 | 1 | 21 |
| Osa01LNT0016300.1 | osa-miR1847.2 | Translation | 4.5 | 14.273 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0016300.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0016300.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0016300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0016300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0016300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0016300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)