© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0193900.1
TTTCAATCTCAAAAATTCAAACGATTAATAATATGAAACAGAGAAGTAATTGTCGAACAGATATAGTATCACGGGGTTTTTAACCTCCCTCGCCATACAGCTGGCCTCTAGCCCCACAAGTCATTCATCTAAACATATTATGTTTTCTAAAGCTGAAAGCGTATTTCTTCTTGCCGCCTTGCTCTGTTTTACTCTGCTTCAACTCCTCTGGTTCAGTCAGTGGGTGCGCAGGTGTTACACTCTTCCCCCTCACTTCTCTCCTCTCACTTCTCCTCCTCTCTCCTCCTCCTGCTTGAGAGTCCCCAGCACCCACGCCCCTGGTTACGCTCATACCAGCATAACCACCATCAAAGCCATTGATGGGATGCAACATTTCAGCAGCACATGCAAAACAATAAATAGATTTCTTCCTCTTATTTGCCCTCATGCTTAGTCGCCGATCAGCATCTTCACCATATAGGCCACCTTGATAATTCTTTCTTAACAGTTTGCATGAAGATAAGCCCCACTCATCGGGCTCATTGTCACCCACGGCGTCTGTGTGAAACTCAGCAAATACTAGAACTTTTTCAGAGCCAGTGCCAGCATAGAAGTTCAGATGGGCATATTTCTTCAAGCTTGTTTCAGTTTGGTCCAGAAAGGTTTGCAGAAGAAGGCGTTCAGATAGCTTGAACTTGTTTTCCTCCGTTCTCTTCTTTTCTTTGTTAAGCGATGCAAGTGCAGTTGTTGCTAACTGGTGAAACTCCATGTCAACTAGTGCAGAGCTGTATGCCTCAAGGAAAGAATTGGCAACACTATCAAAATGGGAGGTGGAATTTGTATCTTGTGCTGGCGATGGACCTGCCACTTAAAACAAACATAAAGATGTCAATGGGAAAGTCATTCCTAATGTCTCACGCATCTTGTTGCAGCATATGAACAACATCAATTGTAAAACAATTAGCCAAAGGAAATTTAAAATTAAGTTTCTCACTCACATGGATCGGTTTCCCAGTAAAACTGTAACATATAATCTCTCAATAAGTACTGTAAAGTAGTAGTAGGGCTGTGTTTAGTTCCCTTCAAACTTCCAAAAATTCCATCACATCAAATGTTTGGACACATGCATGTAGCATTAAATGTGGACGAAAAAAAAACCAATTGCACAGTTTGCATATAAATTGCGAGACGAATCTTTTGAGCCTAATTACGCCATGATTTGACAATGTGGTGCTACAGTAAACATTTGCTAATGACGAATTAATTAGGCTTAATAAATTTGTCAGGCGGATTATGTAATTTGTTTTGTTATTAGACTACGTTTAATACTTCAAATGTATGTCCGTATACGTCAAAAAAAAATTTGGCATGGAACTAAACACGGTCTAGTTCTTCTTTAGCTAGTAAGCATAGTAAGCATAGTATAGGTCAGTACAACTTTCCCTTCTTCAATAAGGGTGATGCTAGTAAGTCAAGTCCTTTTTTCCCTTACTCAGTAAGCTATAGACCTGCTAGAAGTAGTAATCAGTTCTTTTCTTTATCAGTAAGGTCTAGACAACAGCAGCAGCAAGGTTAGTTTAGAAACCAACTGAACTTGTACTATAAATATATCTAAAGGCAAACAAAGAAAAACAGCTTGCACTGCAACTTAGTACAATATCTAGAGCTGCCCTGTTCTGTCCAAGACTAACAAAATCCAATCGAGATTTCATTCATTCCACACAAGTCTTTTATCGTTGGAGTTTCGGGAATTTTGATTGAAAAATTGATTAAACCGCTCGGTTTGTAGTACTCAAACCGAGCATTTGAATTCAAAACTTGGTTTTCCAGATTCATCTGGTATTTATCGAATTTTGTCAGATTTCACGAAACCCAGTGATCCTGTCAGGTATCCTATGTACTTAATTAGAATTAAACCTCGGTACATACAATATGTACTTAATTAGAATTAAACGAAATGCAAACCTAACAAAGTGGTTCTTAGGGACGGTGAGAGCTCCCAAGCAAGAACATGGCTGCTGCTGCAAGGCTCAACACCATCTTCCTCTGAAACCTTAACCATCTGCAGGTCCACGGCAACTAGATGCTGCTTCTGGGAGAAGTAGACCACGTGTGGTTTGCTGGGGTGGAAGAAGGCAATCTTCCAATCACACAAGTCAGTCCAGATGTCATCAAATACAGGACTGGACAAATCGAAGTCCAAAGTCCAATGGCCAGCCTCAGAATCAGCCAATGTCCATAATCTGATCCTGGACTTAGAGTTAGAGGCGTGGCTTAGCACCACCAACCGCAGCTTCCCACGGCTGAGACCCACACGGCGATTGTCACTCAGACCCATGCGACAGCTCTGCTGCACATTGGGGTTGCGGCAACAGCTTGGGAGCGGCACGAAGTGAAGCTCTGGATTGTCAGAGAAGGGATCGCAAGCAACGAGGCCCTGCAGGAGATCTACCCACCAGAGCCTCCCCTGGTGAGAGAGAGCATAGTCACTACACCAACACCACAGGAGCTTATACTGAGGGGGTTGTTGTAGAATCTTGTGGATCCACTTGGCAGGGTCTGTGGAGAAGCAGCGCAGGATGACGTCGCTGCCACGGATCGAGAGCTCCGCGACCATGATGTAGATGTGGTCGGATCCTCCGGGAACCACGACGAGGCCAGTGGCGGCGCCTGTCTCGGTGGGGGTGGCGGGGACGGGAAAGGAAATCTTGTAGACTGCGTCCCAGAGAACGTAGGACTTGCTGTCGGCAAGAAACGGATCGGAGCTGGAAAGGAGAAGGATGCCGGAGGGGTCAGCGGCGAGGACGCTGCCTGAGGCGAGGCCGAGCGAAGGGGACACGAGGAGCTGCGAGATGCGCGGGGTTGCGACGAGCGAGAGGGAGATGCCGTCCTTAGGGAGGTCGATGGAGGTGAGCGGTAAGCGGTCCAATACAACCCACTCAGGCGGCGCGGCCGCCGGCGGCGACGCCATCGGGTTTCTTTCTGGGAAGAAAATTTGGGGGTTTTCGTAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0193900.1 | 3 | 662592 | T | C |
| Osa03LNT0193900.1 | 3 | 664688 | G | A |
| Osa03LNT0193900.1 | 3 | 665512 | A | T |
| Osa03LNT0193900.1 | 3 | 665984 | A | C |
| Osa03LNT0193900.1 | 3 | 663883 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0193900.1 | osa-miR5537 | Translation | 5.0 | 10.914 | 1 | 22 |
| Osa03LNT0193900.1 | osa-miR5824 | Translation | 5.0 | 19.214 | 1 | 24 |
| Osa03LNT0193900.1 | osa-miR5824 | Translation | 5.0 | 14.725 | 1 | 24 |
| Osa03LNT0193900.1 | osa-miR169f.2 | Cleavage | 4.0 | 15.049 | 1 | 21 |
| Osa03LNT0193900.1 | osa-miR169f.2 | Translation | 5.0 | 19.073 | 1 | 21 |
| Osa03LNT0193900.1 | osa-miR1858a | Cleavage | 4.0 | 16.866 | 1 | 21 |
| Osa03LNT0193900.1 | osa-miR1858a | Translation | 3.0 | 5.398 | 1 | 21 |
| Osa03LNT0193900.1 | osa-miR1858a | Translation | 5.0 | 15.658 | 1 | 21 |
| Osa03LNT0193900.1 | osa-miR1858b | Cleavage | 4.0 | 16.866 | 1 | 21 |
| Osa03LNT0193900.1 | osa-miR1858b | Translation | 3.0 | 5.398 | 1 | 21 |
| Osa03LNT0193900.1 | osa-miR1858b | Translation | 5.0 | 15.658 | 1 | 21 |
| Osa03LNT0193900.1 | osa-miR2872 | Cleavage | 4.5 | 24.694 | 1 | 21 |
| Osa03LNT0193900.1 | osa-miR5528 | Cleavage | 5.0 | 14.944 | 1 | 21 |
| Osa03LNT0193900.1 | osa-miR2122 | Translation | 5.0 | 19.101 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0193900.1 | 3 | qST3-2 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0193900.1 | 3 | nan | Resistance or Tolerance | Other soil stress tolerance | R1468A | R1468B |
| Osa03LNT0193900.1 | 3 | qRDW3-1 | Resistance or Tolerance | Drought tolerance | RG348 | RG104 |
| Osa03LNT0193900.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0193900.1 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Osa03LNT0193900.1 | 3 | nan | Morphological trait | Root | RG104 | RG348 |
| Osa03LNT0193900.1 | 3 | nan | Morphological trait | Root | RG104 | RG348 |
| Osa03LNT0193900.1 | 3 | qRTV3-1 | Resistance or Tolerance | Drought tolerance | RG104 | RG348 |
| Osa03LNT0193900.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG104 | RG348 |
| Osa03LNT0193900.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG104 | RG348 |
| Osa03LNT0193900.1 | 3 | QPh3a | Morphological trait | Dwarf | RG104 | C515 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)