© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0194400.1
AAGAAATCTGTGTTGATCCCAACCCAAAATTTCACATCCTCCAAATCGTAACGAAGAAAAGAGAAAAATCTGCACATCTACAACGAATGCAACGCGTCCAGGGCTGCTTTCACAAGAATCCCTTCTCAAGAATCGCAAACGAAAACATCTTTATCCTGTTTCATATGGTGAGGTTTTCTTGGATGGGCAGGAACGTGCCGCAGATGTTGCCGCCGAGGTCCGGGAACGCGGCGCATCCCGGCAGGGGCTTCACCTTGCCGTCGCGGGCGACGCTGACGGGGTACTTGACGAGGTGCCCTCTCATCTCGCTCACCTCGCTGGAGGCGAACTGCCTCCAGTTCTGCTCCCCGATGTGCCGAACCTGCCTCGTGCACTCCAGGCTCTCTGGGCAACTGAAGCTTTCCTCCACCGCTCCAATGTGCTCTGCCCACAGTGACATCCTGTACCCGTAGATCTGTCCACGAGGAGCAGAAAGCATGTTTGCCCATGTGTACTGGGGCTGGTACGCTCCCATGGCGATCTCGGTGTCTCTGGTTCCTTCCATGGATCTCTGGTTAATGTTAGCCGATCCAATTATCACGTATTCATCATCCACGATCATCCCTTTCGAGTGCACATACACCATGAACCTCCGGTTCTTCTTAGCTTGATCCTGGGGATTGTTGGCTGAACTTGATCCTCTGCAAGTGCTAGGACTGCCGCCTGCTTCACGATTGCCAAGACAGAAGAAGTTCAGGTAATCCTGTGGCTCATATGTGTTATCCAGCCCTACTTCTTTCAATGCCTTGTGAATTACCTCATACATCATTTGCATTGTTTTTTTCTGCCAGTAAAGTATTCTCTGTGTAGGAGCACCAGTAGGATTACCTTCAGGCCACATTGGAATTACTATGTACGCTGAAAACCTCTCATTGGCATAAATCTTGTTGGCAATTTTGAGAGCTATTTCAATCGGTATTAAGTTATTAGCACCTACATCTTTATGTGAATCCCAATTAAATGAAGAACCAAGGAAATACTGATTTTCAATATAGATGAAGTGTTGAGCTCCTCGGATTGCATTCACATAAGCGGTTTGTACGCTCATATCAATTAGTACGTTTTTCCCACAAACGAGATTCTTACTGGTTGCTTCTCTTGGATTTTTGGGAAAACCCTTGACAGAATTTGAATCAATTGACCGGAATATCTGAACATCCCATCGCTCTGGATCATTGTCACTTGAATACACTTCATCGTCAATGCTTGCAATATCAGGTATCCTTCCAATCCATAGCAATGTGTCATTATTTGCCTTTGACAATTTTTTAACCCCGCTGCGCTTGGATGCCTTTAACCAGCGCTCCTCAAAGTTTGTCAAGACATCATATGCCGCTGGGCCATCAATCTTAGAATGCAAATCATGCCATGGTTCTCTTGGCCCTTGGGCATCAAGTACCGCAAAGTTTGGGTTATAATAGTCGTCCTTGTGCAATGTCTGGAGAGACCGAAAAAGAGGATGAGTAGGTGTATCATATCGTCCACCGCATAAATCAAGGCCTCCAACAAAAGCAACTATTTTCCTTTTATGGTTGCCGGCATCAGCATCCAGAATCACTGTTTTCTGATGATGTGTAAAAATGGTTCCGGTCTCCTGCTGCTTAACCCAGCTGTGCCTTTTCCCAGCAGAACGCGGGCAGAGCAGTATCTGAACTGAAGAATGCTTGAAAAATCTACGGGTCTCCTCATCCCGTGTGCCCATGTAACCTTCCTATAGAGAAAACTCTGACAACAAGTCAAGCTGTATTTGCATGAATATATTATTCACAGGTTTTCAGAGATCAATGTGTCACTCCATCAACCCCAACTACCATTAGACAAAGCAATGAAATTTGGACCAGAAGCCAAATAAGTGGTGTGACCATCAGTTTGATACAAGAAACAAATAGCCGAAAATTAATTTTGTGATTGCATGTTGCATTGTGCATACCATCTGGATACCAAGGACGTTCCTTGACGTTGGATCGTCCCAGACGAGGAGCAGCACCCTCACCCCCTCCTGCGACTTCCTCTTCAGCAGATCGCCCAGCGAGACGCCGGCGCCGCCGTCCCGCACAAGCTGAATGGTGTGGAACACCGACCACCCGGTGATATAGATGAGCCTCCTCGCCTGCGATATCGCGTCGTAGACATCGTGCCAGCATTGGCCTTGCCGGTAGAGCGCGCCATTGCCCAGCCTGATCTCCGGCAGCGAGCCCTCCGGCACATGCGCGTCCTGGTACAGCGTCACCCGGCCGCCGCGGCGCAGCGGGAAGTAGGTGTTGGGGACGCCGGCGAAGTCCGGGCCCGGGGTGACGCCGTGGTGGTACATGGTTAGCCTCGCCACGGGGATGTACTGCACCGACAGCCGCAGCACGGCGCCGGGGGCGCACGGCTTGCCGGCGGCGGGATCGAGGACCGGGTAGACGCCCTCGACGTGCTCCCCGGCCTCGAGCTGCTCGGCGGGGACGACGACCTCGCCGATGAGCTCGGCGCCGAAGACGTCGCTGTCCTTGACGAGGAAGTGGACGGCGGGCGCCTCGTGCGCGACGGGGATGAGGAAGTGCTGCGCCCACACGGGGTTCTCGTCGTCGTTGACGACGTAGGTGCGCGCGACGGTGGCGGACGCGAGCTGCACAGTGACGTAGGGGTCGCTGGTCATGGCGCCGTTGGCCGCCTTCTTCTTCTTCTTCGTCCCGAGGATGTCGACGACGGTCTTGGAGACGATGTCCATGTTTGGGAGGTTCCGCGCCTCGTGGATCCATATGTCAAGGCTGCCGTGGAGCATCGCCGACCGCCGCGACGCCGACGACGAGCCCCAGACGCCGTGCCCGTGCGGCCACACCACATCCATCCCGCTCCAATTCGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0194400.1 | 3 | 1029963 | C | T |
| Osa03LNT0194400.1 | 3 | 1028447 | A | T |
| Osa03LNT0194400.1 | 3 | 1029083 | G | A |
| Osa03LNT0194400.1 | 3 | 1029713 | G | T |
| Osa03LNT0194400.1 | 3 | 1029946 | A | C |
| Osa03LNT0194400.1 | 3 | 1031295 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0194400.1 | osa-miR5799 | Cleavage | 4.5 | 10.645 | 1 | 24 |
| Osa03LNT0194400.1 | osa-miR5827 | Translation | 5.0 | 8.0 | 1 | 21 |
| Osa03LNT0194400.1 | osa-miR6250 | Cleavage | 5.0 | 21.998 | 1 | 22 |
| Osa03LNT0194400.1 | osa-miR6255 | Cleavage | 4.5 | 16.877 | 1 | 22 |
| Osa03LNT0194400.1 | osa-miR396c-3p | Translation | 4.0 | 19.889 | 1 | 21 |
| Osa03LNT0194400.1 | osa-miR396e-5p | Translation | 3.5 | 17.177 | 1 | 21 |
| Osa03LNT0194400.1 | osa-miR1864 | Translation | 4.0 | 16.449 | 1 | 24 |
| Osa03LNT0194400.1 | osa-miR396g | Translation | 3.5 | 17.177 | 1 | 21 |
| Osa03LNT0194400.1 | osa-miR396h | Translation | 3.5 | 17.177 | 1 | 21 |
| Osa03LNT0194400.1 | osa-miR396d | Translation | 3.5 | 17.177 | 1 | 21 |
| Osa03LNT0194400.1 | osa-miR5151 | Cleavage | 4.0 | 15.616 | 1 | 22 |
| Osa03LNT0194400.1 | osa-miR5524 | Cleavage | 5.0 | 14.601 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0194400.1 | 3 | qST3-2 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0194400.1 | 3 | qRTV3-1 | Resistance or Tolerance | Drought tolerance | RG104 | RG348 |
| Osa03LNT0194400.1 | 3 | qRDW3-1 | Resistance or Tolerance | Drought tolerance | RG348 | RG104 |
| Osa03LNT0194400.1 | 3 | nan | Morphological trait | Root | RG104 | RG348 |
| Osa03LNT0194400.1 | 3 | nan | Morphological trait | Root | RG104 | RG348 |
| Osa03LNT0194400.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0194400.1 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Osa03LNT0194400.1 | 3 | Hd9 | Physiological trait | Flowering | nan | nan |
| Osa03LNT0194400.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG104 | RG348 |
| Osa03LNT0194400.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG104 | RG348 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)