© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0194900.1
AACCTTCACGGGAGAATAAAATGCTGCTACTTTCCAATGGTAGCTCATACTAGGACAAGAGAATGTTGTGACAAAATGTTTATCCATACGACAAGAACAGAACAAGTCACCTGGCAGCTCATACATAGGACAAATGGACAATATATACTAACATAGAGCTTTCCCATGGTCTTCTGATGGGGAATCAGCACATATCGGTTCTCTCGGTATATCTGATAGCATTACACCAAAAATCCTACCTAACTCCTAGGTTGAGTTGGCAGGGATGATACAAAACCAAGGCTTGGGGCCTTACAGTCTAAAGAATATGCTACGCTGACAACATGTACAGTATGTACAACTCAATTTTTCAACTTAAATGGTATACCAACAGATCCCCGGCCTGTCAAACTGTGTCTTTAGTCATCGCTTGTGTAGACGTATTGCCGCAAAAAGAAATGATGGAATTGTCTGTCCAATGTTCCACGGCATGTGCAAAGAGTTAATGCACGAATAAATCATTGTCAGTCAAATGAATGAATGTCTGTGGCTTTGTAATGTTAGAGTGATCTGTTGTAGGCTTCAAGCATGGTTGCTTTATCCTCATTCTGCATACTGCTTTCCGAGGGGAACCAGCGCATAAGAATACCAAGGTGCATTACCACAGGAATTAGTTTGAAAATGAGAGGAGTTGTAACCAAGCTAAGTGCAGTTGTTCCCAGTAATAATAGATACATTTTTCCCCCAACAAGATGAAGATGCGAAGCACGGCTAAGAAGCACAAATGCAAACTCTCCTATCTGTGCTAATGATAGCCCAACAACAAAAGCTGTTCTGATGCTGTATCCAAATGCTTTCACCACAACTGTTACGACTACGCTCTTAACTATTATAACCAGTATAACAGCTGCAAGCAATATGTCAACATGATTCCACAAGAACTTGACATGTATGAGCATGCCGATGCTTGCAAGGAAGAGTGCTGCAAATAAGTTACGAATTGGCTCCACCTGCTCCAAAGTATGATGAGCAAAATCTGTGGTTGAGATCATAACGCCAGCAAGAAATGAGCCTAGTTCAAGACTCAATCCAAGATAATCACTACACCAGGCTAGCAGCAAGCAGAAAGCAACAGAAGCCAACTGATAGAGTTCATTTGTCTGCGATGATAGCTGAATCATCAGTTTCAAGAATCGAGGAACAAATGACCAAGTCATCATATATGCAACAGTTATAAATACGGATAATACAAGCAGCAGTTTAGCCATTGACATCACGCCTCCAAAAATGCCACTAGCACCACCCAGAACTGGAAGGAGAGCAAATAATAGTCCAACGGCACAGTCCTGAAGAATAAGTGTACCAATTGTAACTTGACCATGAAGCGCATTGGTGCTACCTTTCTCCACTAGAAACTTAGAAACCACTGCAGTAGATGACATTGACAAGAAAGCACCAACAAATACTCCCTCCGATGATTTAGCACCACACAACGCAGCAGTTAGGCCACACAAGAACATGAACAGAACAATCTGCAGTAGACCACCAATTACAGCGACAGGTCCAACCGCTTTCAACTTTGTCAGTGAAAACTCAAGGCCAAGAGCGAATAGAAGAAACACCACACCGAATTGCGCAAAAGTCTCCACCTGAACCATTTCGCTGATAAAGTTCAAGCCTCCAGGTCCAACGAGAGAACCGGCCAGTAGATAGCCAACAATAACCGGCTGCCCCAAACAAGAGAATATGATACCACCAGCAGTAGCTGAAACAATTATAACTACTAGATCTTTAATCAATCTTAAATCTAGTTGAAGTGTCGGATACTTTGTTTTACGATTTGACATAACAAAAACATTATCCTCCTTATCTATTACAGTTTCCAAGTCATCAGAATTTTCATTCTGACCTCCAAACATGTCACCTATTTGAAAAGGTTTTGAAGAATTTGCCTGCTCTGAATCATTCTTCTTTTTATCATGTGTAATGACAGCTACAGTCTCCAGAACAGCTTGATGATCTGAGATGCTGTTGTTGAAGCTACTCTTGTCTGGTGCCTCGGGGGTGTCGCTATCGGAGAACTCCTTGTCGAGCACGCGGCCGAACATCTCGGCGATGCTGCCGTCCCCGGTGGCGTTGCCCGAGCCGTTGGTGACCAGTTTCCCGTAGAACTTCTCCCGCATCTCCTTGTCGGGCCTCGCCGCGGCGGAGCGGAGCTGCACCCCGAGGACGAGCGCGAGGGCCACCAGGAGCAGCGCGGCGGTGGAGCGCCGGCGAGACAAGGGTACCCGTCCCGCGGCCGCCGGGGCCATCGGATCGGTCCGGCGGCGGCTCGACCGACCGGCCGAGGCGGAGGAGGCGGAGGAGGAGGCCGCGGCGGCGGCGGGAGGGGGAGAGATTCGCGGGTGGCGCGTCGGGGTCGGTGGATTTTGATTCCGCGGGAAGATTGGTGTGGTTGGCGCGGTGGCGGAGTCGCCGTCCGAGCACGAGAAGACGGGAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0194900.1 | 3 | 1571520 | T | A |
| Osa03LNT0194900.1 | 3 | 1574184 | C | T |
| Osa03LNT0194900.1 | 3 | 1574342 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0194900.1 | osa-miR5538 | Translation | 4.5 | 17.302 | 1 | 22 |
| Osa03LNT0194900.1 | osa-miR5811 | Cleavage | 4.0 | 17.364 | 1 | 24 |
| Osa03LNT0194900.1 | osa-miR5813 | Translation | 4.5 | 19.678 | 1 | 22 |
| Osa03LNT0194900.1 | osa-miR395c | Cleavage | 5.0 | 14.522 | 1 | 21 |
| Osa03LNT0194900.1 | osa-miR1438 | Cleavage | 4.0 | 15.443 | 1 | 22 |
| Osa03LNT0194900.1 | osa-miR2099-5p | Cleavage | 4.5 | 11.773 | 1 | 22 |
| Osa03LNT0194900.1 | osa-miR2931 | Cleavage | 4.5 | 6.453 | 1 | 20 |
| Osa03LNT0194900.1 | osa-miR5521 | Cleavage | 5.0 | 12.201 | 1 | 21 |
| Osa03LNT0194900.1 | osa-miR5509 | Translation | 4.5 | 9.937 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0194900.1 | 3 | qST3-2 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0194900.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0194900.1 | 3 | QSbr3a | Resistance or Tolerance | Sheath blight resistance | RG348 | RG944 |
| Osa03LNT0194900.1 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Osa03LNT0194900.1 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Osa03LNT0194900.1 | 3 | QSs3 | Physiological trait | Sterility | RG348 | RG944 |
| Osa03LNT0194900.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG348 | RZ329 |
| Osa03LNT0194900.1 | 3 | qFDN-3 | Physiological trait | Flowering | RZ329 | RG348 |
| Osa03LNT0194900.1 | 3 | qHDD3-2 | Physiological trait | Flowering | RG348 | RM231 |
| Osa03LNT0194900.1 | 3 | qHEJ-3 | Morphological trait | Shoot/Seedling | RM175 | RM22 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)