© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0195100.1
CTGCTCAACTTGTTCATGCGAACCAAGAATTCAATTGAAATGCGGGATGCACGGGTATAGCCGTTCAGCGATATTAGTACAGATTTAACTATTTATCTGTGGAGAATAATACAAATTTATACACATGAACTCCATAAAAGTAATTAAGAACTAATGTCCTGAACCCTGATCATTGCTAAAGGTCGTATAAACAAATACGGTATTTACACACGGAATTGACATGCTGGCGTTTCTTACACACTACACTATCCAATTATACATCTTATGTTACAAGTAAGAGGATATATTTCACTGTTTGAGCGAAGTTGTAACTACAATAGATACAATATGCCCTGTGGAATATTTACAACATACATACGCCAAAATACTTAAATCTTGAAGACCACAAGCACAAAATGGGTAGAGAAGATCAGTCCTTGTTGCGAGAGGACCGCTCCCGCTCCTTCTTCTGACCACCAAGAATCCGAGAGATTTGCAGTCCTCTACTGAACGCTTGATTAAATAGCATCCGTGTCTGAAACTCGGACACAAAGGGAAACCATGCCAAAATAGTAATTGGTGTAAAGAGAAGAACTCCCATAATTATCTCGTATGCCCGAGCAAGGGCACGAACAGATCCCCATAGCCCTGCTCGCCGAGCAAGAGGCTTGCAAGCTTGTGCAATCAGCAATATTCCCCATCCGGAAGGTAAGAATGCCAGAAAGCACACAAATATATCTCGTAAGGTCATATGAAGTATTGCTATCAGTACAATCAAGATGGCGATGAACGAAACAAATATCATAAACTTAATCAGACGGAAAAATAGCTGAAAATCCGCACTAAATCTCCGCCTTCCGACAGATACAGTCTTCATAACAAGCAATACCACCAAAATCACGAGCCACGAAATTAAATATACCAATATACTTTTGTCGCCTGTGATATTTAAGTGGTAAACAAGGCCATACTGGTATATGAAAAACCTCAGGGACAAAATTATCTCAACAAAAAGTCCAATTGTCCCAGAATATTTCAAATGCTCTAGCTCGATCTCCCACCAGGATTCCCAACTCTTGTCTGGTGACACCCCAATGCCACCACGATTGCTGATCCACTTATTCCAATCAGACCAATCATCCACAATTTTCGTCCACTCAAATCCCGATGGATTGAACAGGAAGGGTGCAAAAAGCCATGTCAACACTAGGAACCACATAGAGAATGTAACAAAAATATAGGCAATGGTTGAGCGGTAAGATTGACCAAATAGTTGGTAAATGATGAGCAGAATCAACAACTCAATGCCTTTAACAAAGTGACTGCGAGAATAAAGCCTGTAATTCTCTGCAAACTTAGCATGAAAGACAACAAAGCCCCTACCAGTAGCTCTGTACTGAGCACCTCCATGGAGCAACATTCGTCCATAGTAGTGAGTCTTAGTGCCAAGTGAAAACGTAAAGAACACAGCTGCCAATTGCAAGTTCATCATGATAAATTCACTTAGTGCTTGACCAAATCCTTTTTCAAGGCCAATTTCCATCATCATGGGCAGGGCCATCAGAAAACCTAGCTGAACCAGAGATTGTGAGGCAAGAGCAACCTGAAGGGGGTGGTTATGAATGTATCTCCTTTGTGTTAAAAGCCCTTCTTCAAGTCCACTGAGAGCAAGATAAAGGCGTCCATACAGAAATACATAAACTGTGACAACTGTCAGCAGAGTACTGAAATAAAATCCCACAGTAGTGAAGTAGCATGAAAGCATTCTGAAGAAATCGAAGCGGTGTCCAAGCCGGTAGATATCACGGCTAAGAGTCTGCTCTCCATTTCCATTGGCCACCTTAGCCTCAAACTTAGAGATCTGGTTTAACCCTACATCTCTTCCTTTACCAACTTGCACATATTCATGATGTGTTATATTTCCTCCACGGAGAGTTGAATTATAGCCTGCAAAAATATCTTCGCTCAAGTTGATACTCCTTGATGCCTTACTGACACCACCTCTTGTTAGATGAAAAATCCTATCAAATACGTCAGGATGGCCATAGTGGAATCGAACCTTCAGAGGGTTTGCAAGCAGCCGTTGCCCAATAGTCACAAAACTATGCTCCTGATTGGACATAAACCATGCGAGAGAAGAGACACTGCCAGTAAAAATATGTTCCCTAACTCCAAGTATAGATGGGCGCCGAACTCCATGTTCTGTAAGGAACTCTTGAAGCAAATTTCTCATTTTAAGTGCTTCTTCCATATAGTTATCCTGGTTCATGTCTATGGTTTGCAGGCCTTCACCACGGGTGAAGATTATTGCATGATTTTGATTTTCAGGCTTTCCTTCTCCCAACATTGCAGGTCCTGGAAGTTTTATCCGGTAGATAACCTGATCAAGATTTTGAACTGGATCTGTAGATTCAGAATCCTTAGTTAGAGCAACCTTTACCAAAGTTGAGTAATAAGCTGGCTCCATTTTCTTTTCTTCCACTCTATCTTCGACCTGATCGATATATGCTACACGAAGAGAAGGGTACGTTCTCATCAGCTGTAATATGTCTTGGGCATTAGGAAGAGCAGCACGCTTGTCATTTCCATATTGCTGGCATGATACCACATAGGTAAACTTCATATCAGCCACTGCTTCACATTGCGCAAACAAGGACCGCTGTAACTTCCATTGTTCATCAGTTGACTCAACTGCTTTATACCCTTCCATGAGATCTTCATGTTTGGCCATATCTAGAAATGCTTCAAGAACCAAAGCTTTTCGGTAGTACATCATTCCCCTAACTGTTCGAGCTAATGTTTGCCCTCTGTATGAAGCCCACAGACGAAGCTCCTCATTCTTGTCTTCATTCTCTTTAAGTTCCTCATCCCATTCAACCCTTTGCTGAAAGTTCTTCCATTCATCTGGGTAAATTTTCTGTAGGTAGAATAGGGTGGAAACTCCATCCTCATTTTCCTCCTGCAGCTCTTTTATCGAAAAAAGAACAGGTTCATTGTAATACGGGGTCAACGCGGAAAATGAAAGCATGTTTCTGACTTTGGGAGCATCAGGCATGTCCATAAACAAAGAATTGGTGAAAAAGGTAAGACGCCTTCTAGCCTCCAGATTTGAGGGGACATCCATAGCAGACTCTTTCACAGTGAGTAACAGTTCCAGCCTTTTTATCTTCTCTATCCAGGCATCTGTGAATTGTACGGGAAACTTGATAGCTCCAGCCGGTTGAAATAACTGATATTCTTGATCCCATGTCGTTGTGCCTTCAGGCCTTTGGTATGAACCACCATGACTTGACTCCAAAATACTAGAAAGTTGGTCTTCCATTATATCTCTTGTTACAACCTCCAGCATATCTTGAAAAATCTTTATTACAGCATCCCTATCATTCTTATCATTCTTCTCCAAATATTTTACCAATTCAACAAACTTATTGTAAAGATCTGGCAAAGCGTGCATATTCAAATCAGTAATAACTTTGTCATCAGCAATATACTTTTCAACTTCTGCAAATATAGTATTTATGACCCTTTTCTCTGGTTCACCTTGTACAAGATCCTTGATGATATTTTTAAATGATGCATAGCATTCTTCAATTGCACATTTAAAATAATAGTCGTTCTCAAGCCTCTTTTTCAGGTCACGGTCTTTGCCATTGCTATCTTTAGCCATGTCAACAGCTATGGGGATCTTGCTGGCAAGCAAAAAAGGAGGCCACTGCATAATCTCAAGAGCCTGATCAGCCACATACGGAACAAGCAGCAGCTCCTTCTCCTTGTTATTTATAAGGTCCTCTTCTCGAAAGCTCGTGATAATTTCGTTCCACATCTGTGCAAATCTTGCGGCTATCTTCTCCTTGTCTGTGTGCTTCCTCTCAAAACGACTGTGCAAATAAGACTTTAGACCCTTCTTCCTTTTTGCATCAGATTCTTCAGCCGGAATTAGACAGGCATTAAAGGCTAAAGGTATTGAACCAAAGCGAGATCGCAGCATTCCTAGGGTGCGGATCTCTCCAAGTCGTTGGAAAGCACCATAAATTCCACCAAGCAGTGTCGAGAAGATTGTATACCAAATTTGTGTATCCATGAAATAGACCAAAATGATTGGAGCCCAAAGCGCAATCACGACACCAATGTTTCCGTTCGCTTTTGGGAAAAACTCATGCCACTGAAAAGTGTGTATAGGTAACTTCATGATATCCTTGGTAGGTTCGACAAGAGGCTTGATCTCCACATAATAGCTAAATGCAAACTTTATCAAAAGAAGAGCAATCCAAAACATGGTGTACATGAAAAGTGAGAAGGCACTTTCATGCATTCCCCTACCAACAAATAGACGAGGCTCACAAACTTGTAGTCTGAACTTTCAAGTATACGCCGTAGAAATGGGAGAAGAAAAAGAATAGCAGCTAGCAAACTGGGAGACAAATATATAACTACTGCAAGGACAAAGAGTGATGGGTGGTTTTGACCATTTCCAAACCAGCCTTTGATGGCCCTGATAATTCCTGTTGGATTCTCCCAGGTGTATGCATATGTAACCGGCAGTAATACTACCCACAAGGCTGCTAGTGTGAACTTTAGAACATATCTCAGTTTAACTGCAAATTCCATTGTTCTCCTGGCCTTCCAATTAAAGATTATATCAAGTGTAGCTTGCCCGAGATTTAGAATAGCAGAAGTAATAAATATGCTCAGAATCTTCTTGAAAACAACAGGATCAAAAATATTTCCCAGCGAGCCTCCATTCCAAGCCAGAATTACCATAACCTGAAGAGCTAGAATAAAGAAACTCCACATTCTATCGAAACTCCTGAATATGTGCCAAAAGGAGCGTAGCTCAACAAAGTTGACCTTTCCTTTCTGCTTTTCAGTTCTTGTGGTTTCATTTCTTTGATCAGGTGAATTTAAATGTTGACAAAAGAAATCAGCATCCGCACGCATAGGCCAACCTAACCGAAAGCACTCAGCAGACCAGAAATATTCATTTAGATCATCGTAGTTTCTCCACTCAGAATGATTTCCTTTTTCTCTTTTGCTCCTTTCAGCTTCCTTTGCAATGGTGAGGTAAATTGGAGTAACAACTTTCTTCAGAAAGGCTTCTTTCTCACCCCCATAGGCTGGCTTCACATATTCACCCGTCAAGGCACTCACATTTCCAACTAGCATACCATACATTTCAAATGCCATCTATAGAGTTGTAAGTGCTAGAGTTGTCAGCACCTCAATAAGCTATCAAAGTCCAACACAAACATTGTTGTGGGCACAGTAGAAGAAAAATTCTGAGCTAAAACATTCTTCGAAGGAAAAAAAAACTTATACTAACACAATAAATGAACTCCACGAATATTGGTTGATATGGTTGCAAAATTAGACTCTCCATAGGATCAACTATAGTATCTTGATAGAACAGGTCGTAGAGTTGAACTGTAGATTAGTATAAATTTTGCTCAATATGAATGATTGCATCCTCATTTACATAAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0195100.1 | 3 | 1591625 | C | T |
| Osa03LNT0195100.1 | 3 | 1593421 | A | C |
| Osa03LNT0195100.1 | 3 | 1594713 | C | T |
| Osa03LNT0195100.1 | 3 | 1590919 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0195100.1 | osa-miR5537 | Translation | 5.0 | 15.176 | 1 | 22 |
| Osa03LNT0195100.1 | osa-miR5512b | Cleavage | 5.0 | 8.99 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395b | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395d | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395e | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395g | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395h | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395i | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395j | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395k | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395l | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395s | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395t | Cleavage | 4.0 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395c | Cleavage | 4.0 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR167h-3p | Translation | 5.0 | 22.843 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR169i-5p.2 | Translation | 5.0 | 22.84 | 1 | 22 |
| Osa03LNT0195100.1 | osa-miR169i-5p.2 | Cleavage | 4.5 | 9.395 | 1 | 22 |
| Osa03LNT0195100.1 | osa-miR171f-5p | Cleavage | 5.0 | 19.574 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR444a-5p | Cleavage | 3.5 | 18.314 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395m | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395n | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395o | Cleavage | 5.0 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395p | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395q | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395v | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395w | Cleavage | 4.5 | 2.206 | 1 | 22 |
| Osa03LNT0195100.1 | osa-miR395r | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR1429-3p | Cleavage | 4.0 | 22.834 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR1847.1 | Cleavage | 4.0 | 16.925 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR1861g | Cleavage | 4.5 | 16.5 | 1 | 22 |
| Osa03LNT0195100.1 | osa-miR2097-3p | Cleavage | 4.0 | 17.465 | 1 | 22 |
| Osa03LNT0195100.1 | osa-miR2875 | Translation | 4.5 | 15.563 | 1 | 24 |
| Osa03LNT0195100.1 | osa-miR2931 | Cleavage | 4.0 | 7.557 | 1 | 20 |
| Osa03LNT0195100.1 | osa-miR395x | Cleavage | 3.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR395y | Cleavage | 4.5 | 2.206 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR3981-5p | Cleavage | 4.0 | 13.987 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR5083 | Translation | 5.0 | 8.519 | 1 | 20 |
| Osa03LNT0195100.1 | osa-miR5083 | Translation | 4.0 | 11.99 | 1 | 20 |
| Osa03LNT0195100.1 | osa-miR5149 | Cleavage | 4.0 | 9.644 | 1 | 22 |
| Osa03LNT0195100.1 | osa-miR5152-5p | Cleavage | 4.5 | 11.014 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR5491 | Cleavage | 3.0 | 10.644 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR5496 | Translation | 5.0 | 14.699 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR5512a | Cleavage | 5.0 | 8.99 | 1 | 21 |
| Osa03LNT0195100.1 | osa-miR2275d | Cleavage | 4.0 | 12.068 | 1 | 22 |
| Osa03LNT0195100.1 | osa-miR2275d | Translation | 4.5 | 20.033 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0195100.1 | 3 | qHEJ-3 | Morphological trait | Shoot/Seedling | RM175 | RM22 |
| Osa03LNT0195100.1 | 3 | qST3-2 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0195100.1 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Osa03LNT0195100.1 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Osa03LNT0195100.1 | 3 | QSs3 | Physiological trait | Sterility | RG348 | RG944 |
| Osa03LNT0195100.1 | 3 | QSbr3a | Resistance or Tolerance | Sheath blight resistance | RG348 | RG944 |
| Osa03LNT0195100.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0195100.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG348 | RZ329 |
| Osa03LNT0195100.1 | 3 | qFDN-3 | Physiological trait | Flowering | RZ329 | RG348 |
| Osa03LNT0195100.1 | 3 | qHDD3-2 | Physiological trait | Flowering | RG348 | RM231 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)