© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0195200.1
GCGCTCAATGTAATCTGGCAAATATCATCTCAAATTAATAATTGTAATCAGCAAATTTGTGTAATACACTTATAGTAATCTATGCTCAAATAAAATCGAACATTAGATATCGGTTCTTTTTAAACCTATAAATTGGATTGACTACACTCTTACCAGAAATTCCACTCAACGATTTCATCACTCTGCTGGTTTGTCCATCTGGCTAAAATGCTACAGATCATCAATCCCCAATTCTGAATTAAAGAATTGACCCAGCTACTACACTATATGGAAAAAGATAAACACAATAATTATACAGTTCACTTGCACATTTTCATATCAGGGTGAGTTGCAACTTTGGGCGGTGAGGCTGAGGCTCAACCACCTCCATATGAATCATAACGGTCTGCAGGACAGCGTAACTGACGTTTGTCCCGGGCTTGGTTACTCTCTGGTGCACCTCATCTACTACCCAATCACCCCCCTTGTCTCCCTTTGGAGTAAGGTAGATGGGCCCTTCTATGCCAAACTTTGGGACAAATACTATGAAACCATTTGCCTTGATCTTTACAATTCTAGCTTCAGTGTCCATCCGCCTTGTCCTGAAATATATGAGGGTATGAAGCTCAACTGATGCTCTGCTTGCCATCTGGGCATTTCGATGTCTATAATTCAAGTTGTCAGCTACGCCTGTAAGTTGTGGACCATCCTGAAAGAGGGGTGGAAGTTTGGCAATTTCTAGGGCAGCAGCTAACAACCTATGAACAATAACATCTGCATATCTGCGAATAGGGGAGGTGAAATGTGTGTAAAGAGAAGCAGCAAGGCCATAATGGTAATACTCAGAAAAGGTCAAGTCTCCGCTACAGAAATAAACTGCCTGTGTCATGCATCTAGTTGCCAAAATCCTGATAAGCTTGTTGAAGTATGGGTCATCATTCTTTGCATTATCAAGTGATTCTGCTAATGCTTTTGAGGATGACACATCCAGATTTAGCCCCACAGAAGACGCAGTTCGGAGTAATGGCTCAAGCATCTCCTTTGTTGGGCTAGGATGGCGCCTTAGCAATGAACACAAGGGGAAGTGCTTCAAAATCTTCTCAGCGACAGAGATATTTGCAGCCAACATAAACTCTTCAATCATTTGATTTGCCTCACGAATTTGATATATTCCTATGTCAAGCGGATCATGGGTTTCACTATCAATTTCGAATTTGACTTCTGCTGAAGCAAGTGTTAGAGCCCCTCTTTCACAACGCCGATGCCTCATAATCTTTGCTAACGAGTTTAAGTTCCGCAGGTCTACAGTTAGGGGATCGACCAAACGGCTGTCATCCATTCTTGCTTGAGCTTCCACATAAGACATTGCAGCGCAAGACTTGATAACACTCTTTGTATATCTTGTGGATATGATATCAGCATGAGGTGTCATTTCCCAAATGACAGAGAACGCCAATCTCTCAACATCAGCACGAAGAGAACAAACATCTTCAGTAAGAGGCTTTGGAAGCATGTCAATTCGCTGTCCAACAAGATATACAGAAGTGCCCCTTTGTGAGGCCTCCTCATCAAGAGGAGTACCAGGATGAACAAAGTTAGTGACGTCAGCAATATGAACTCCAACTTCAAAATTCCCATTTGGGAGTGGCGTGCAATGTAGCGCATCATCAATATCCCTACAACCAGGCGGATCCACACTAAAGACTCTCACATGGCGTAAATCTTGTCTATTAGGATTAGCAAGATCTTCAGGTGATAATGTCCATGGCAATGGTGGCAAACAAGCAAGGACTTGTGTAGAGAAAGGTCTTGTGTTGATATCATTCTCTATTAAGACAACCTCTGTTTCAGTATCTTTGTCACCAATATCTCCTATAGTCCGTACATAATGTCCTGATGGGTATCGAGACAAGACATCCCATGAATCAACTGCAACAATAATCCTTTTGTCCAGAAGATTGCCAAGCTGTCTAGTTTGAATTCGAATCTTTGGGATTCGTCGATCTTTAGACACAAATAGAGCATGAGCAACGCCTCCACTACCAGCAGGCATGGGCATTGGCTCCAAGGACCCACAATACGAATTCCAATTTCGCTTGATTATACCAACAACACGTCCAACTGGGCGACTAGAGACAGAATCAGCTGATGATGCAGCTGTTGATTGTGTGGGATTGGCTTTCCGTGGAGCATCATCAGCACTATTTGGAGCCAAATGGACGTCTTCTTCATCATCTTCATCGTCGTCTGCAATAAATGACTTCGATTCATGCCATTGATCTTGTGGCAAGAGCTCAACAGCAACTATGTCTCCATCAAAAGCCCTATTCATGTTTGAACGGCCATGAATAACAATCTCATCACCAATGCTCTCACTTCCAACGTAAGCTTCAAATGGATTGTAACGATTAACTCGGAGCTTCCCTTGATGATAAATTCCACACCGCAGGCCAGCTGTAATTTCTGACATAGGTTTGTGCTCACTGTAAATTACTTTCTTTTTGGACGGTCTAAGATCTTCTACATCTTCCATTGTGACATCTCCACTAGTTGAAACAACCACTAAATCGAGCAAACCAGGCTGTGCAAGAGATCGTACATATGATTCCACTGTCTCAGCATTAATGCCTTCTTCAATAGCTTTCCGTTTGTTATCTCTATCATTTGTGATCAGCAAAACTTTCACATTCTCACCAAGATGACTTTGGTACCAACGAGTAGCCACACGAATAGCTCTATCGTTGCGATCATTCGGGCTCTCTCCAACCATCTCTTTGACATATGTATCCCTGTGGTGCTCATTGGTGAACACGAAGAACCTCCTTGCCTTGTTAGAACACAGGGCCTTGATCCTGTTGAACACTGCGAGGTTTTTATTCTTCACCTCATCCAACACAACCGATAGTAGGACAACATCGTCAATCGCTGGATTCTCCAGCAAATCGATCTGGTGGAGCACGACGTTGGTGTCGACGACGAGGATGGCGGCCGCGTCGGCGGAGAGCGGGTGCTCGACCGCGCCACAGGTGGAGCAGGAGGCGGCGCCGCAGGAGATGTCGTCGCGGAGGTAGTGCTCCCTGACCACCTTCTGGACGCGGCCTGCCCTCGTCTTCTTCACGAAGGTCTTGCTCTGCAACATGTCGGCGAGGTCGGGCGTCGCAGGCTAGCGGCGGCGGCGGCGGCGGCGGCGGAGAGGGACACGGCGTCGCGGCGGCCCTGAGCGTGAGTGAGACGGCGCAGACCGGCGGCGGCGGTGGAGAGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0195200.1 | 3 | 1654005 | G | C |
| Osa03LNT0195200.1 | 3 | 1657007 | T | G |
| Osa03LNT0195200.1 | 3 | 1657132 | T | C |
| Osa03LNT0195200.1 | 3 | 1657568 | C | T |
| Osa03LNT0195200.1 | 3 | 1657582 | G | A |
| Osa03LNT0195200.1 | 3 | 1657926 | T | C |
| Osa03LNT0195200.1 | 3 | 1659752 | T | C |
| Osa03LNT0195200.1 | 3 | 1661005 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0195200.1 | osa-miR5788 | Translation | 3.5 | 20.992 | 1 | 21 |
| Osa03LNT0195200.1 | osa-miR812q | Translation | 4.0 | 14.029 | 1 | 24 |
| Osa03LNT0195200.1 | osa-miR7692-3p | Cleavage | 5.0 | 15.465 | 1 | 24 |
| Osa03LNT0195200.1 | osa-miR7695-5p | Translation | 5.0 | 19.0 | 1 | 24 |
| Osa03LNT0195200.1 | osa-miR814a | Cleavage | 4.0 | 18.765 | 1 | 22 |
| Osa03LNT0195200.1 | osa-miR1428b | Translation | 5.0 | 16.429 | 1 | 21 |
| Osa03LNT0195200.1 | osa-miR1428c | Translation | 5.0 | 16.429 | 1 | 21 |
| Osa03LNT0195200.1 | osa-miR1428d | Translation | 5.0 | 16.429 | 1 | 21 |
| Osa03LNT0195200.1 | osa-miR1428e-3p | Translation | 5.0 | 16.429 | 1 | 21 |
| Osa03LNT0195200.1 | osa-miR1862d | Cleavage | 3.5 | 17.174 | 1 | 24 |
| Osa03LNT0195200.1 | osa-miR1862e | Cleavage | 3.5 | 17.18 | 1 | 24 |
| Osa03LNT0195200.1 | osa-miR2922 | Cleavage | 5.0 | 10.151 | 1 | 20 |
| Osa03LNT0195200.1 | osa-miR5494 | Cleavage | 4.5 | 10.843 | 1 | 21 |
| Osa03LNT0195200.1 | osa-miR814b | Cleavage | 4.0 | 18.765 | 1 | 22 |
| Osa03LNT0195200.1 | osa-miR814c | Cleavage | 4.0 | 18.765 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0195200.1 | 3 | qHEJ-3 | Morphological trait | Shoot/Seedling | RM175 | RM22 |
| Osa03LNT0195200.1 | 3 | qST3-2 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0195200.1 | 3 | QSbr3a | Resistance or Tolerance | Sheath blight resistance | RG348 | RG944 |
| Osa03LNT0195200.1 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Osa03LNT0195200.1 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Osa03LNT0195200.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0195200.1 | 3 | QSs3 | Physiological trait | Sterility | RG348 | RG944 |
| Osa03LNT0195200.1 | 3 | qHDD3-2 | Physiological trait | Flowering | RG348 | RM231 |
| Osa03LNT0195200.1 | 3 | qFDN-3 | Physiological trait | Flowering | RZ329 | RG348 |
| Osa03LNT0195200.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG348 | RZ329 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)