© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0195300.1
CTGTCACTTCCCAACTTAGAAAGCACTAATCAAGAAGAGTAGTATTGTCAACGACAATTACCTGCATGTTCATTTGTTCCAGTCAGCATCTCATCTATGGTACAGACAACAGCAAGTGTTGGCTCTAAACTAACACATTGCAATTAAACAATTAATCTTTCCAATCTCCTACCGCCCCAGTTTCTTCATACTGCAATTCCTAGGCACACTCCAGGTGACAGAATGCCGGTCACTCCCGGGCGTCGCCATGAACCTCCTCCAGTCCTGGAGCATGAGCCCGAGGTCGTCGACCTTCCGGCGGAGGCCGACGCAGCAGTTGGCGTGCATGGTGCACACCGTGCTCAGATTCCGGCCGTGCTCGCAGAGGCCGGCGAAGAGGTCGGTGCTGAGGAACCTGATCCTGACGCCGAGGCGGGCGACGTAGGCGTCGCGCTTGATGAGGTTGAGCACGTCCTGGTCGTGGAGACCCGGGTGCCTCTCCCTCGCCGCGTACCAGTACCGGTAGAACGCCGCCGTCGCCGAGGTCGAGCGCACGTACGCGAACCCGCCGTTGGGGCTGTTGCTGAGGTCGTCCGGGTCGCCGGTGAAGTGGTCGCAGGCGATCTGGAAGTCGCCGTCGTGGTGCAGGTGCGGCAGCGGGTTCCTGAACCACACGATGTCCGTGTCCGTGAAGATGAAGCTGTAGCCCTTGGCAAGAACGTGGCCGAGGAAATCGATGCGTCGCCACATCATCTTGAGGTAGCCGTCGGTCATGAAGTTCTTCTCGCCGGAGAAGTCGAAGCCATCGTCGGTGGTGAGGGCGAAGCAGTGGCGGTGGATCTGCAGGCAGCGGCGGTGCGCCGTGAGGTCGAGGGAGACCATGACGAGGTGGTCGAGGAGCCACCTCGTTTCGTCGCCGATCCGGAAGCTCTCGAGGAAGACGTCCACCACCGACCCGGGCTCCGCCCACGCCGAGTTCAGCGTCGTCAGGATCACCGTGCCGTTCGCCATCGCCGCCGCCCTCAGGACGCGTTCCAGCCTCGCGTCCTCACTGTTCGGGTCGACGTCGCCGCGCGGCGGCGCCGGCAGGGCGGCCGGCCGGAGGAACAGCCCCGCCGGCGACACGGCGGCGCGGTACAGCACGAGGCACGGGAGCGCGACGGCCGCCAGGAACAGCGCCGCCGTCTTCGCCCTCCTCACCTGATCGCCCGCTCCAAGAGACCAGGCTGCCGCCGGCGCCGGCGCATCCCGTGTCCAACGCCAGCGAGAGCGAGAGCGAGCAGCCGTCGTCGTGCTCGCCGTCCGGCGCCACGCCGTTGTTGCTCGCGGCGGCGGCGGCGGCCGGTTCGAACCACACCGAGCGATACGACGACGAGGGGCGCGCCTCCGCGCGGCCGCCGCCGCCGCCGCCGCCGCAGCTCGCCGTTGGCGGCGCGACGCGGTGTGGGGCAAACGTGCCGACCTGCATGAACAGCGCCACGTGGTAATTAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0195300.1 | 3 | 1669365 | A | G |
| Osa03LNT0195300.1 | 3 | 1669419 | G | T |
| Osa03LNT0195300.1 | 3 | 1669582 | T | C |
| Osa03LNT0195300.1 | 3 | 1669611 | A | G |
| Osa03LNT0195300.1 | 3 | 1669791 | T | C |
| Osa03LNT0195300.1 | 3 | 1669931 | C | T |
| Osa03LNT0195300.1 | 3 | 1670127 | T | C |
| Osa03LNT0195300.1 | 3 | 1670338 | T | C |
| Osa03LNT0195300.1 | 3 | 1671034 | C | G |
| Osa03LNT0195300.1 | 3 | 1671586 | G | A |
| Osa03LNT0195300.1 | 3 | 1671997 | T | A |
| Osa03LNT0195300.1 | 3 | 1670771 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0195300.1 | osa-miR5529 | Cleavage | 5.0 | 18.08 | 1 | 21 |
| Osa03LNT0195300.1 | osa-miR394 | Cleavage | 4.0 | 20.512 | 1 | 20 |
| Osa03LNT0195300.1 | osa-miR815a | Translation | 4.0 | 11.331 | 1 | 21 |
| Osa03LNT0195300.1 | osa-miR815b | Translation | 4.0 | 11.331 | 1 | 21 |
| Osa03LNT0195300.1 | osa-miR815c | Translation | 4.0 | 11.331 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0195300.1 | 3 | qHDD3-2 | Physiological trait | Flowering | RG348 | RM231 |
| Osa03LNT0195300.1 | 3 | qHEJ-3 | Morphological trait | Shoot/Seedling | RM175 | RM22 |
| Osa03LNT0195300.1 | 3 | qST3-2 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0195300.1 | 3 | QSbr3a | Resistance or Tolerance | Sheath blight resistance | RG348 | RG944 |
| Osa03LNT0195300.1 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Osa03LNT0195300.1 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Osa03LNT0195300.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0195300.1 | 3 | QSs3 | Physiological trait | Sterility | RG348 | RG944 |
| Osa03LNT0195300.1 | 3 | qFDN-3 | Physiological trait | Flowering | RZ329 | RG348 |
| Osa03LNT0195300.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG348 | RZ329 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)