© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0195400.1
GTGATGACAAATTCAGTATCCTTCAACACACAAAGCTTACGGACATTTTGCACTCACCAACACCACCTTGCCACAAACCCAGCAAGCACTCTGAAAAGCAGAGTTAAACAAAACGAAAAAAAAAAACACGCCCCAAAATGTACAGGTATACTCAAGGAGTTGATCCACGAGACCGATCAGTCAGTCAATCAGTCGCCGACGTTGAGCAGCACGTCCCAGAGCGTCTCGTCGACGAGCTCGTCCAGTATCTCCGCCTCCATCTCTGCGCCGGCCGCGCCGACGTCCTCGCGGAACGGGCCGTTCCACGGCGACATGCTCATGTCGCGGCCGATCAGCTCGTCCACGGAGTTGGGCGAGTCCGTCGGCGGCGGTGGCGCCAGCCACGCCTGCACGGTGTTCCACAGCCCGTCCAGTAGCCTCTTGCCGCCGGGGGATCTCCTCGGCGCCGCGCCGTACCACCTGCTGAACGCGCACAGCGTCGTCGACGACTGGACGACCCGCGGCAGCGACTCGTTGATCAGGTCGAAGAGGAGGCGGTGGTCGACGCCGGTGGCCGCAGCGTCGCAGTCGGTGGTGGCCGGGGCTGAGGAGGACGACGACGACTCGACTTCCTCGAACACCCACGCGGGGATCGGTTTCACCTCGCGGTCTGAGAAGAGTTGGTCAGAGCTTCGTCTCTGTCCGTACAGACCGGCGATGACAAGAATTGCTCTGATGTAAGCTTTGATGGGGTTATCTATCTCGTCTGTGTCGTCGTCGTCGTCGTCCTGGATTGGACTTGTTTCTGCGAGTTCTTGATCGGTTTGAGCTTGCTCCGACGATGGATGCTCTGGTTCAGAAGCACTCGAACTCATGTCCCTAGCCGCCATCTTCAAGGGAGATCGGTGCTCGCTGAACGAAGCCTCCAATGGCGAGACAGGGCTCGGGTAACCTCCCCTGCTCATCTCATCAGGAGGGCTACTGCACCACGACGCCGGGCTCGGCGGCACCTCGGTGGAGTTCTCCTGGAGGACGCCGGGGTGGATGAGGACGGAAGGGGCGGTGACCAGCGTTCCGATCGGAGGGAGATCATCGGGGAATGGCGACTCGTCGGCGGAGTGGAGCTTCTTGCCGAACAGCTTCGCTCTCAGCCCCAGATTCTGCCTCAGGTTGGACACCCTGCCCTTGATGTTGAACGTGTCCTTCCTCCCCTTCCTCTCCTCCTCCGACGATGGCGGTGGCGGCCTGCTCCCGTAGCCTTCCTGCTTGCGCTGCAGCCGTGCTCCGGTCAGCACCCGCGGCTCCTCCGAGAGAAGCTTCACGAAAGTGGTCCCCGACACCGGCGCCGAGAACGACCTGATGAGGTTCCTCGGCGATACCGGGTCGGAGTCGATCGCCGGAGTTGGTGACGCCTTGTGGTGGCCACGTCTGAAAGACCTGACGTCGAACTCGATCGCGTGCTTCTTCTCCTCCTTGCTCCTTATCTTGCCCTTCCTTGCCACCTCATGCCTCGGCTTCGGCCTCGGCTCTTCGTTGAACGACGCCGAGGCGGTTCTTCTCCGGTGAGACAGTGCCGGCGGCTCGGTCTCCGGCTCTCGTCGGAGCACATTCTTCAGCCTGTCGGAGAGGTGCTTCCTGGCATCTCTGCAGATGTAGTCCATCTGGCTCTGGCCATTGAGCGGGATGTCGCTGCGGTACGACCGCGTCGACTCCGACCGGAGCAACGCCGAGTGCAGGTCCTTGGTGACGGTCTCCCTGATCTGGTTGGCGATGCTCCGAGCAATCTGCTTCGGGTCAGCCGGAATGTCGCCGCCGGCGGCCCACCTGTCCGCCGCCCTGTCGTCGGAAGCCATCCTCCCTTCGAGCTCGACCTTGAGCCGCTTCTTCACCTCCTCGAGGAAGGCCTCCATGTTGTTCTCCTTCTTCACCATCTCCGGCGACCCCAACGACGACTCCTCGATGTCGTCGGTGCTCATCTCGGGACAGGGCTTCAGGATCACTATCTTCTTCGGCGACAGCAGCCTCTCCTCCTCGTAGTAGAATCTCGACAGCGGCAGCCGCGTCGAGCTGGCGTCCGCGCTCGTCAGGGAGAACGTCCGGCTGCCGGAGATCGACGTGCCGGTGCCGGTGCCGCTCTCCTTGCTCCTCCTCCAGTGTGCGTCGCCATTGGAGTGCGTGTGCTTCTTGCCGGCATTATCCTTCCCTCTGTGCTGGAACCTGTAAGGCACGATGTCAGTGCACCTGACGTCATCGTCGTCGAGATGGCTCTCCAATTCCAGAGCTCTCGACTGCTCCCACATCCTGCTCGCCTGCCACGCCTCGAAATCCTTCTTGAACTTCTGCAGCTCCTCCTCCTGCGGGTGCTCTCGCGGCTGCGGTTTAGCCCATTCACTGCTGCTGATCGCCTTGCTCAGCTGACCAAAGAGCTCCATGCTGTCGTCGTAGGCACAGACCTCAGCTTGCTTCGGCGAATGCTTCATGGAGCCCTTGTGTTGCACGAAGGAGACATGCTTGGTTGAGACCATTTCAGAAGGATCTCTTCTTGGCATTGGCCTTGTGGAGGTTATCATGTCTTGCCTTTTCTCCTCCGTGTGGCCGGCGGCAAGCTCACCGGCGGTTGTACTCATTGGAGGTGAGTCCATGCCCATCAACCTGGCAATGACACTTGGTCTCTTCTGAACTTCATTTGTTCTGAAGGATACGTCCTCATGGATGATCCTCTTGATTGGGGATGAGCTGTGGTTGAGACCAGCTTTTGGGTATTGTTGCCTCATGTTGCAGGAGTACGGGACATCCTCTTGGAAGACGCCATAGCTTTGTGGAGCCTCCAGGGTGAACTCCATGCTATTCCTTGGGGCTTCAAATCCTTCGCCCTGCTTCTTGTGTGACCACTTCCTTGAGGTGCTAGCATGAGAGAAGTCCAGGTACTGCAGCATGGTGGCACTTGTTGCCAGAGAGATCCAGCAGTACGCTGCGATGGCAATATTAGGATATCTGAAGGACGAACGAGACAGACCTTACTATCCTTATGGAGATGGAGATCAGATCCAGAGGTGGGGGCTTGATGCTGTAAGATGAACAGCACACTGAAGCACAGCTTATTTAATTTGAAGGAGACATGCTTCTTCATGTTGGATCTTCTCCGGGACATGATCCTAACAGCATTCCTGCAGAGCAAACATGGCACCTTCCGTAGGGAGGTAAATCTTCTTTCTGCGGCTAAACTAAACTTAGTTGTGAGCTTATGAAATGGCGTGCATGCATGCATGCACAGCCATCATTCCTCACTACTAAAATAAACTTGCAAAGCAGAAGAAAAATCATATCTGCCCGATAAACAAGTTAAACTGTGACCCTCCTAGATGAACAGATCACATGGTGGGGCTCCCCATCGAATCAATACCATTCAGTTCCTCCACGCACTGCCTTTTCTGCAACAGACTGCTCAAATGATTGTAGACACCTTCTCTCATGGCATCCCTATTACCAGTATTTAAGGTGTAAATAACTGCTCCAGGATGATTCCTCAACCTCGCAACTCCGGGAATGTCTCGGCCCAATCTTGGTACAGGAATTGTGGCTAGCACTGGAATGTTCGATTCAATAACTCTCATTACAGCAGGGAAGAATGCCGAACTAAACAGCTCCATTTTACCCACTTCATCAATAATGAAAAGATCAGTGTCGTCCTTGACCTGCAGCTCCGGCAATGCTAGAGACTCCAGAGAAGCTATATCTACTTTGTACCTCCCAACAGTAGGCCATCTAACAGACTCGCGGCTGGAAACCTTGGAGGAGGCGAGCGGCCCGGTTCGCCCATCGAGCGTGACGACCTCGAACCCGACCCTTTCCCCACTCTCCCTCACCTCGCGGGTGTAGAAGCCGCGAATGTTGAGATGCGGGTGGGATTCGCGGAGGGTTTCGAACACACGCGTAACCAGCGTCGTCTTCCCCACGCCCGGCGGGCCGGTGACGAGGAGGCACCTCGACGGCGCGGCGGCCATCTGGTCGGTCGTGGCAGCCGGCCGCGGCGAGGGGCGGGTCACCGGCGGCGGCCGCAGCGCCGGCGTCGGAGGCAGGACGGGAGGCTGGTGGCGCTGCTGCGTTGAGATTCGTGTCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0195400.1 | 3 | 1745322 | A | G |
| Osa03LNT0195400.1 | 3 | 1737829 | A | G |
| Osa03LNT0195400.1 | 3 | 1737970 | G | C |
| Osa03LNT0195400.1 | 3 | 1742398 | C | T |
| Osa03LNT0195400.1 | 3 | 1743270 | A | G |
| Osa03LNT0195400.1 | 3 | 1743589 | G | A |
| Osa03LNT0195400.1 | 3 | 1746638 | C | G |
| Osa03LNT0195400.1 | 3 | 1747179 | A | G |
| Osa03LNT0195400.1 | 3 | 1745095 | G | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0195400.1 | osa-miR166k-3p | Cleavage | 5.0 | 21.742 | 1 | 21 |
| Osa03LNT0195400.1 | osa-miR166l-3p | Cleavage | 5.0 | 21.742 | 1 | 21 |
| Osa03LNT0195400.1 | osa-miR419 | Cleavage | 5.0 | 20.692 | 1 | 21 |
| Osa03LNT0195400.1 | osa-miR395o | Translation | 4.5 | 10.319 | 1 | 21 |
| Osa03LNT0195400.1 | osa-miR817 | Cleavage | 3.5 | 22.751 | 1 | 21 |
| Osa03LNT0195400.1 | osa-miR820a | Cleavage | 4.0 | 16.631 | 1 | 21 |
| Osa03LNT0195400.1 | osa-miR820b | Cleavage | 4.0 | 16.631 | 1 | 21 |
| Osa03LNT0195400.1 | osa-miR820c | Cleavage | 4.0 | 16.631 | 1 | 21 |
| Osa03LNT0195400.1 | osa-miR1861b | Cleavage | 5.0 | 23.12 | 1 | 22 |
| Osa03LNT0195400.1 | osa-miR1861f | Cleavage | 5.0 | 23.12 | 1 | 22 |
| Osa03LNT0195400.1 | osa-miR1861i | Cleavage | 5.0 | 23.12 | 1 | 22 |
| Osa03LNT0195400.1 | osa-miR1861l | Cleavage | 5.0 | 23.12 | 1 | 22 |
| Osa03LNT0195400.1 | osa-miR1862e | Translation | 5.0 | 8.415 | 1 | 24 |
| Osa03LNT0195400.1 | osa-miR1881 | Cleavage | 5.0 | 21.879 | 1 | 24 |
| Osa03LNT0195400.1 | osa-miR2102-5p | Cleavage | 2.5 | 19.873 | 1 | 20 |
| Osa03LNT0195400.1 | osa-miR3979-3p | Cleavage | 3.5 | 18.966 | 1 | 20 |
| Osa03LNT0195400.1 | osa-miR3979-3p | Translation | 5.0 | 20.755 | 1 | 20 |
| Osa03LNT0195400.1 | osa-miR5083 | Cleavage | 5.0 | 13.653 | 1 | 20 |
| Osa03LNT0195400.1 | osa-miR5339 | Translation | 4.5 | 20.192 | 1 | 21 |
| Osa03LNT0195400.1 | osa-miR5492 | Cleavage | 3.0 | 16.216 | 1 | 21 |
| Osa03LNT0195400.1 | osa-miR2863c | Translation | 5.0 | 19.642 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0195400.1 | 3 | qHEJ-3 | Morphological trait | Shoot/Seedling | RM175 | RM22 |
| Osa03LNT0195400.1 | 3 | qST3-2 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0195400.1 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Osa03LNT0195400.1 | 3 | QSs3 | Physiological trait | Sterility | RG348 | RG944 |
| Osa03LNT0195400.1 | 3 | QSbr3a | Resistance or Tolerance | Sheath blight resistance | RG348 | RG944 |
| Osa03LNT0195400.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0195400.1 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Osa03LNT0195400.1 | 3 | qFDN-3 | Physiological trait | Flowering | RZ329 | RG348 |
| Osa03LNT0195400.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG348 | RZ329 |
| Osa03LNT0195400.1 | 3 | qHDD3-2 | Physiological trait | Flowering | RG348 | RM231 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)