© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0195500.1
AGCACAATTCTTACATTTCTACCGTACTGTACATGATATACAAAAAAAAAAATCTTCACCCGTAAAAGAGCAGGTTTACACGAGCAACATCGAAACTACTCCAACATATAAATAACATTGTATTAACAATAATGCTAACACTGATCTAAAAACAACAGAATTCATCTCGACTTTGATGATGATCTTGTTTCATTGCCAGCACTGCAACTGCTTTCTTGTGAACCCTTTCGCTTACTGGTGGGAAGACATTTCAGAATTGCAAAAATGCTCCCATGAAGGCTGAACAGACACGCTGTAACGGGTAACCTGAGGCAGGCTTTCAAATGCTGAAACCTTGAAGTGAACACTTGAGAACTATTGAGTCAGATGAAACCCCAAAAGAGCTACAAACTTTTGAACTGTAACTGACTGCTAAATCTATCCCAAAGCTTCATTTCGACAAATGCCAATTATTTTCATCCTCTGACCTACTCACCTACAATTATGTACACTAGTTTAGTCTGCCTACACAAAGTTCCTATGGTTATGAAACTGAACAAAAGGCATACAGCTCCATCTTCTATTCCCGTGGACTCCACTGCATGAACTTCAGCATGCAAATCAATACCAAGCACCGACAGGGAACATCAACAATTACTTCATTTCCAATTCAAGAACACAGCACGGTTCAACTGCAACATCAACAGGCAGCTGTCCATTAATTTGCACCTCAGCCCAAGTATCCAAATCTGAAGCCTGCATACGCCATCTTGACTTACAACCAAAGGCAGCGTCAGGCATTCTTTACCTGAAGGAGCAATGAGATGATTGTTTTCAGTGCTGCAACACCACTGTCAAGACAGACCAGTTTGACCGAAGGAAGCATTGAGCAACGGTTGAATGCTAGGATTAACCAATATTCTAACTGTTTGATTACTTGATGACTTGTATACATCAATACACTCCAGCAGGTCTGCATCACAGGTTAAAAGAACCCACTCAGATTCATCGTCCAAATACTTGAGGTCCACGTGAGTATCCTGAGAAATGCCGAACCGCTTTACGATCTCTTCTTTTAGCCTTTGAAAGCCCCAACTAGGCTGAAGACGGAATATACATCTTTCCTCGCCATAGATGGCTTTTATTTTGAGAGAATCAGACCTAGCCTTTTGCACGTTTGACATGTTTTCTATCGGTTTGTGTTCACTTAAAAGTACTTGACTCTGAGACCTAAATAGCATGGTAGGTCTTTCTTCAACAAACATTTGCAGCTCTGCCTCTGCATGGCTAGCAGATTTGATTAGTGTGGAGCACTGATTCTCATCCATAGATATTTCCTCTTTGACTGCAAGCTGAGGAGCACTACCATGCTGTTGCTGAGTCTTTGGAACACTGGAACAACCAAGGCTAGAATTTGAGCTCTGGCTGCAGGATGGGGAGATGGAATTAGAGCCAGAAGTATGTGAAGTGAATCTGCCCTCACATGGACGATCAGGAACTGAAGGTTCCAGCTGAAAGTTTTGCTCAGATGCTGGAAAATGGACATCTCCTTGTAACTCTCTTTCTGACCATGTGGTCTTGGTAAAATTTTCATAGAGTGAACTGAGCTGAACTGTTCCTTCAGGACCATGTACTGAATCAATGACCATTTGCAATTTCTTCAGGGAGTGCCCAACTTTCTTGATCTTTCGTGATGGCCAACGATTAATTCCATGCTGCCTGCATATTCTCTTCAGTGTAGTCGGGCACACTCCTAAATTCTTTGCAGCTTCTTTCAGGCTACCAGCAAAATGCTTCCGAAGATCTTGCAGGCTAACTGTTTTCTCCGTCTTAGTGCGCCGTTTTTCTACTGCTTTGTCCGAGTTTGAATTGCTTGGATCACTGGAACAAGTATTTTCTTTGACATCATAATCTTCATGCCGCTTAAACCCTGAAAACATGCTACCGTCAGGTGCCATAACTGGAGAAGTATGCCAGCCAGCTGTAACACTAAATCCTTCATCATCTTGTTTGCTGAATCCGAATGGCAAGTCAACATCTATTTCTCCCTTTCCTCCCTTATTCTGAGCATCCACTAAGCTCGCTATCCATGATGATACCTCCTCAGATGCTTCCAATGATGTTGTCCTTCCAGGAACATTAATACCACTACAGAGCTCATCCAAGTCTTCATGCACAGACTTGGCATAAAATTCTGGCCTGGTTGGTTGACTAATTTCAAATGGTCCATCATTTACCAGCTCTTTTGGCTTCACAACTCTTAATGTATAGCATACTTGTTGTATGGTATTAGATAAAGAATTGAGCATGGCCCTTTGCTCTTCAGTATTTATGCACTTCATTGGCAAGAAAAACTCCAAGACAAAGTCCAGGCTTCCAGTCTTGACACTTCGCAGCTGGATGGCAACTGCTGCCCTCAAGCCAAAAAGTTTGGCATGATGCGAGAGAGGGTACTGGGTCTTGCTGTAGGTGGTAATGTCTGGGGAGAAACATGGCTCATTCGTCCCAAATGCCCTGCCGACAACACCCTCACCTCTGAACAGATGATGCTCGGAGCAAGCCTGGTGAAAGCCTAATACGGAACAATCACGGACATAACATGCCTCATCAACAGTGGACACACAATGTTTGTAGCTTTCATCAGAGTGGCGGCTTCCCCTCTTGGCCTGGCAGATGCACGGTATCCATGTCTGGGCTAGTGGCAGATTGTGGGTATCACAAACAGCTCTGAGAACATCCATGATCTCAGGTATAATTGCTCGGTAAGAAGCATCAACAACCTTGGAACGAGGATCACTTGAAACATCAGAGCTCCTGAGATCAACTTCCTGCAATTTTCCACGAAATGTAGTTTTATTAAGACAAGGATGACACCAAGGTAGGAGAAGTGAAAAGATTTATTACTTTGGGGATTGGTGTGCCCAGCAGTTATCACATCTTTTCCTAATGACATTTCATCGAATACGTTAAGAGCATAACATGGTGGCCTGCAAAGCATGGGCATTTTTTTCGGCTTTGGAGAATCAAATGGAGCAGTGTTGCGCAAATCTACCTTGAGAGCATTGCAGATGTTCTCGATCTCCGCACTGTAGTTGACCTTCTGCGTGGTCATGACGAGCTCGACGACGCCGAGGCAGGCTCGGCTCCGCGGCTCGAAGACCGGCAGCGCGACGCTGCCGCGGATGTCGAAGTATTGCGCGTGCTGGACGCGCGGGTACTCCTCGGTGGAGAAGTAGCGGACGTCCGGCGTCCACTCGGGGACGCGGCCGACGAAGACCCGGCCGGGGAGCCCCAGGTCGGCGCGCGCGCTCTCGTCGGCGGAGAACTGGTACTTCATCGACACCGTCCGGTAGTTGGCGAGGCGCTGGTTCCGGCGGTCCAGCCAGAACGGCTGCCCGCAAGTCGTCAGCACCTGCCGGTCGCCGATCCGCGTCGGCACCCAGACCTGGACGAGCAGCTCCCCGTCGCCCCGCTGCGCCTGCGACTGCGACTGCGACGCGATGCGCTCCAGCGCGCGGCGCAGCCGCTCCTTCACCGTCGGCTCCACGGCCACCTCCTGCGGCGCCGTCTGGAACGTCCAGCCGCGGTGCGCGGGGCTCACCTCGAGGCCGCCGCCGCCACGGCTGGGCATCTCCGCCTCGTCCCTGTCGTCCTCGCCGGCCGCCGGCGCGGGGGTAGTCAAGGTAGTGACGCTGCTGCCGATGTCGAACAGCGGGGAGAAGGGGCTCGCCGCCCCCGGATGCCAGAACTCCGACAAATCGAACCCCGGCGTCGCCAGCAAGAACTCCTCCATGAGATCCAGGTCACCGCCGGCGATATCCCCCGTCCCGCCCATCCCGCATCCCATCAATCCATCCTCCTCCTCGTCGCTCCTCGGCGGCGGCGGCGGCGACGGCTTCTGCTCCATGACCGGACAAGCACCACCACCAACCTCACAGCCCTCGCATACCCCCAATCCGCCGAAACGCAGCCGCGCGGAGGCGAACAAACACGAGCCACGAACCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0195500.1 | 3 | 1779233 | T | G |
| Osa03LNT0195500.1 | 3 | 1776998 | T | A |
| Osa03LNT0195500.1 | 3 | 1778380 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0195500.1 | osa-miR5532 | Cleavage | 4.5 | 15.307 | 1 | 22 |
| Osa03LNT0195500.1 | osa-miR5542 | Cleavage | 4.0 | 12.699 | 1 | 21 |
| Osa03LNT0195500.1 | osa-miR5796 | Cleavage | 5.0 | 17.819 | 1 | 21 |
| Osa03LNT0195500.1 | osa-miR5143b | Translation | 4.5 | 3.434 | 1 | 24 |
| Osa03LNT0195500.1 | osa-miR5835 | Cleavage | 4.0 | 13.455 | 1 | 24 |
| Osa03LNT0195500.1 | osa-miR169q | Cleavage | 5.0 | 19.05 | 1 | 21 |
| Osa03LNT0195500.1 | osa-miR1425-5p | Cleavage | 4.0 | 17.329 | 1 | 21 |
| Osa03LNT0195500.1 | osa-miR1439 | Cleavage | 4.5 | 11.092 | 1 | 21 |
| Osa03LNT0195500.1 | osa-miR1861c | Cleavage | 4.5 | 19.562 | 1 | 22 |
| Osa03LNT0195500.1 | osa-miR2875 | Cleavage | 5.0 | 11.126 | 1 | 24 |
| Osa03LNT0195500.1 | osa-miR2928 | Translation | 4.5 | 10.172 | 1 | 20 |
| Osa03LNT0195500.1 | osa-miR5143a | Translation | 4.5 | 3.434 | 1 | 24 |
| Osa03LNT0195500.1 | osa-miR5149 | Translation | 5.0 | 18.706 | 1 | 22 |
| Osa03LNT0195500.1 | osa-miR5158 | Translation | 5.0 | 18.611 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0195500.1 | 3 | qST3-2 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0195500.1 | 3 | qHEJ-3 | Morphological trait | Shoot/Seedling | RM175 | RM22 |
| Osa03LNT0195500.1 | 3 | QSs3 | Physiological trait | Sterility | RG348 | RG944 |
| Osa03LNT0195500.1 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Osa03LNT0195500.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG348 | RZ329 |
| Osa03LNT0195500.1 | 3 | qFDN-3 | Physiological trait | Flowering | RZ329 | RG348 |
| Osa03LNT0195500.1 | 3 | nan | Morphological trait | Root | CDO20 | RG409 |
| Osa03LNT0195500.1 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Osa03LNT0195500.1 | 3 | QSbr3a | Resistance or Tolerance | Sheath blight resistance | RG348 | RG944 |
| Osa03LNT0195500.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0195500.1 | 3 | qHDD3-2 | Physiological trait | Flowering | RG348 | RM231 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)