© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0195800.1
ATCCTGTATGAGTATCTTCATGTTGCAACAGAAGAGAAACGAGAGTTACACTTGCTTGGATAGCAGAGTTCTGAAGTTTTGTAATGGAAGCTAAATCAGATTTTTCAGATGTTTTAAATTTATTTGCTTCCAACATGAGTTCACGCACCCCACGTAATTTGAATTTGCAAATCGAAGTGTGCAACAAAGCCTAGCACTCGATCGTCACCGCCTCTTGGGAAGCTGAAACGCGCGCTTCAAGTAGTGGCTCGCCACCTCGTCGTCACGGTGGCAGAGCACGCGGAGGATCGTGTCCGGGTCCGTGCGGCTCCACCGCCATGTCGTCTCCGGCAACGGCATCCTCTGGCCGGCGGAGCTCGCCGTGCCGTTCAACTCGCACGCGATGCTCAGCTCCTCCACGAGCTGCTCCGCCGTTTGCCCCATGAGCGCCACGACGCTCTCTGCCGCCTCCGCCTCGCCGTCGACCACCTCCTCGGTCACCACTCCCTCGCCGCGCGTGCAGAAGGCGCGCTTCAGGCTCCGGAAGTCCTCCTCCACCATGCCGTGGTCCTCCTTCGTGAAGCTCCTGTCGCCGCCGCCGGCGACGAGGACGAGCAAGAACGCCTGGAACGAGGCCTTCATCACCTCCCGCACCGCCACCGGCTGCGCGCGGTCGACGAGGACGGAGAGGAGCAGCGACAGGTTCTGCTTCAGCGTGCGGAGCGCCGGGCGGATGCGGGCGTCGGCGACGCCGCCCACGTAGAGCCCGTCGTAGAACGAGTGGTGCGAGTCGAGGAAGATGAGGCGGTACGCGGCGACCTCGGCGACGTGCCCGACCGCGGACTGCGCCGCGGCGCGCGCGCGGTCGAAGTGGGAGCACGGCGCGAGGAGGCGGGCGGTGGCGGCGGACGACGGCGACGACGAGCACCTGCCGCGGGAGAAGAAGGAGAGCGACTTGTCGAGCGCGTGGACGTGGCTGAGGATGAAGTGGAGCGTGTTGAGGCGGACGTAGAGGCGCTGCGTGCCGCGGCTGGTCGACGGCCGCGGGTTCTGGCCGCCGGACGCCATGCCGCCCTGGCCTTGGTGGTGCCCGTGGGCGCGCGGGCTCGACACGGGCGCCCGGCACGGCGTCGCCGCCTTCTTCCACAGCCTGATGATCTTCGAGTCCTGGTTGCACCTCGTCAGCGGCGGCAGCGACGGGAGGTAGCTCTGCTTGCTACCGCAAGACGTGAGGAAGGAGATGTACTCCAAAAAGATCGCCTCCATGCCGTCGGCGAGGTCCTGGACCAAGTCATCCCTCACGGCCACCGGTATGCCAAAGAACTCGTCGACGGTCGCCTTAGCCAGCTTCATCAGCTCCACCGCCGACTGCGCGTAAGGCTCGTTCTTGGATCTCGGCATCCAGCTCTCGGTTTCTTTGGCTCGGAGCATGCACTCCCTGCAAATCTTGAGCCTCTCCTCGACCCACGTCCTGAGGAACCCGAACACGATGGACTCCACGTCGTACGGCACCACCTCCCTCACCACCGACTTGCCGCCGTCGTCGCTGTCCGCCACGTCCTCCACCACCATCTGCACCAGCGCCTTCTCCAGCCTCCCCGCCGCGTGCAGCACGTGCACGAGCTCGTTGCTCAGCACGGTGGCCTTGCCCAGGTACTGCTTCAGCACGACGCCGAAGCAGCCGTGCAGCGTCACCGCGGCGATGGCGCCCGGGAACGGGTGCCACCGCCTCAGCACCGGCCCGAAGGCGTCGCGCTCGGATAGCGCGATGTGCTCCGTGTCGCCGGCGAGCCGCGCCAGGATGTCGCCCGGGTCTTCGTCGTCGTGGCGATCGATGATCAGGCTGTCCCCTTGCCCGAGTCCGTTCTCCAGTATCTTCGTGAAGGCGCTTCTCGTGGAACACCTCACGTAGTAATCCACACGGTCGCCGGCGAAGCTTCCGACGCTGCAGTCTTCGTGTTCGGTTTCCGCGGTGCTGATGCTCGTGAAGATCGCGTTGTCGGAGATGATCTGGGTGGTGGCGAGCGCCAGTGACAGAGCGCCCTCCATGGCCATGGCGCCGCCGGCGCCGCAGTTGCCGTTGCCGAACCACTCGTGGTAGCCAAGCATCCTCTTCTCCGACCAGTCGTGTATCGTGGCAAGGATGCTCGAGAGCACCCGTGCGTACACGGGGTCGCGGCTCTCCTGCTTGGCGTCGGCCGCCACCTCCGTGAGCATGGCGAGCGCCGCGCCGGCGAGGTCCGGCTCGATCTGCCCGGTGACCACGTACTGCTGGAAGAGGACCCATGCAAAGCACACGTTGTGCAGCATCTTGGTGATGCCCAGCGTTGGCCATGTCCTCCTCATGAGCTCCAGGAGCTCATCGACTTCGTCGAGCACGACGGTCTCCTCCTTGAGGTCAAAGATGGCCTGGAGGAGCGACACGTAGAGGAGCACGTTGAGAGGGTAGCCGTCGGCCCAGTGGCAGGCGTCGCCGCCGGCGGCCTTGCTTCCGGGGGCGGAGCGCCAGGCAAGGGCGTGCACGGCGTTGCAGAGGGCTTGCATGGCGTCCGACGTCTTGCCGGTGTCGATGGCGCGGGTGTCCGCCGCCTGCATGACCTCGCGGAACCTGAGCACCACCGCGTTGAGGCGGTCATGCGGCAGGGACGGGTGCGCGATGAGCCCGGCCTCGAGGAGCTTCAGCTGCCGGCGCTGCCACTGGTGGTGCTCGCCGCTGTCGGCGAAGTCGGTGAGCTTGACCTGCCGGAGCAGTTCCAGGGGCAAGACGATCGTCTCGGCTTTTCTTCCCACCTGGCCGATGAGGGTGCGCATGAGCGTCTTGCGGAGGCGGGCGTCGTTCTGCTCCGTGACACGCATCTGCTGCCGCATGATCTCGGCGGAGGTCATCGGCCGCCTCCCTTTCCCGGGCGACACGGGCGTCGACGGCTGGCTCATCGCCCACATGGCGCGGCCGGGGGAGCCGGGCGCCGACGACGCGTTCATGGAGCTCACCCGCGCCGTGGTCGGCTGCGACGACCTCCGCGCCTTGAGCCCCAGCGCCCTCTTGACCCTGCTGTTGACGACGCTCATCCCCGTGCCACCCCGGGGGCCGGCGCCGATGGTCGGCGACACGTCGCCGCCGCCGCTCTCCCCGGCCGGGAAGTAGTTGAGCCGGCCGCCACCGGCGGCGCGGCAGGACATGAAGAAGACCTCGTAGGCGGCCTCCCGGAGGTCGGAGCGGGTGAGGCCATTGACGTGGCCGAAGGGGCAGTCGACGGTGGCGTCCGCGGCGAGGCTGCGGGCGTCGGCGTCGGTGGCGGCGGTGTCGGAGGAGCGCGCGAAGGAGGAGGAGGAGGCGGAGCGGGAGCGGTGGTGGTGCTGGAGGCGCCCCATCTCTCCGTTCCGGCCGATCGAGCGAGCGGCTCTTTCGGCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0195800.1 | 3 | 2126159 | T | C |
| Osa03LNT0195800.1 | 3 | 2128898 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0195800.1 | osa-miR5530 | Cleavage | 4.0 | 16.153 | 1 | 21 |
| Osa03LNT0195800.1 | osa-miR5809 | Cleavage | 4.0 | 23.435 | 1 | 20 |
| Osa03LNT0195800.1 | osa-miR5819 | Translation | 4.5 | 17.659 | 1 | 21 |
| Osa03LNT0195800.1 | osa-miR160c-3p | Translation | 4.5 | 21.887 | 1 | 21 |
| Osa03LNT0195800.1 | osa-miR413 | Cleavage | 5.0 | 22.201 | 1 | 21 |
| Osa03LNT0195800.1 | osa-miR1428a-5p | Cleavage | 5.0 | 16.988 | 1 | 21 |
| Osa03LNT0195800.1 | osa-miR1848 | Cleavage | 4.5 | 23.598 | 1 | 21 |
| Osa03LNT0195800.1 | osa-miR1861n | Cleavage | 5.0 | 24.974 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0195800.1 | 3 | qST3-2 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0195800.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0195800.1 | 3 | QSbr3a | Resistance or Tolerance | Sheath blight resistance | RG348 | RG944 |
| Osa03LNT0195800.1 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Osa03LNT0195800.1 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Osa03LNT0195800.1 | 3 | QSs3 | Physiological trait | Sterility | RG348 | RG944 |
| Osa03LNT0195800.1 | 3 | nan | Morphological trait | Root | CDO20 | RG409 |
| Osa03LNT0195800.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG348 | RZ329 |
| Osa03LNT0195800.1 | 3 | qFDN-3 | Physiological trait | Flowering | RZ329 | RG348 |
| Osa03LNT0195800.1 | 3 | qHEJ-3 | Morphological trait | Shoot/Seedling | RM175 | RM22 |
| Osa03LNT0195800.1 | 3 | qHDD3-2 | Physiological trait | Flowering | RG348 | RM231 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)