© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0195900.1
ACATTAGTAAGATATATCCTAATATCCTACTCCTTCCAGCTTATAAAACATTATAGCGTTAAACAAGATTAACAATGGATATTAACAATTTAACATGAGGATAACCTGCACCTTTTCTTTATGAAACCAAAGCGAAAGGAAATATGCAAGATCAAGACATGTTTCAAATCTTCTATATATTAGACAAGACCAACAATGTGTCTTCAGAGTTTTGGATAGAGGTGAGGCGCCTGGCTGTGGATAATCGCTATTCCTGCCGAGAAGCATTGCAAAGGCGAAAGACTGGAGTCGAAGTATATGATGTGCAGGTCATCTGTGATGTTCACAAGCCTGAACATTGGTCCCTTCTTCGCACCCTTGACTGAGAGCTCTACTGATTTCCTGTCCTGTGACTGGGACTCTGCCTGAGGCGAAGTACCACAGCCATCATTCTGCAGTACTCTGATTGGGCAACCAATATCCCATCCGCCACAATCACAGCGCCCACCGGACCTCCATCTTCCGATGAGGCTGGCAGGGCTGCCGTTCTTGGAAGCCGCGCCGCCATGGTAGCCTCGGGGAAATATGGCACTTACACTCCCTGCATTATTTTTCTTGTTCTGAACATCACCATCTTCAGTGCTCCCTGGATGAGTAGCTCCAGCTTTCTCAAGGAACTTGAGCCCCCATCCACCAAGAACAGGTGATTTCCGACGTTCGCGCCGCTGTTTTCGTACTACAATTGCTGCTATCTCCTGGTTGGTAGGCAAATCATCAGCGACGAGGTTCTTGAGGACTGATTCTTTGGCACTGCACTGTTCACCTTCAGGTATTTCAGTCATCTCATCAATCTGTTGGGAGGACGATTTGCCAAACTTCCACACATGTTTCGGACTAGAGTTCAAATTGGATGGCTTCATAATGTCTGCCACTCTCTTGGCTAGCCCCTTGCCTTTTGTAACACCATATGAACTTTGCATTTGCCTCAGGTAGTCATCCGGAGAACCATACAGGACAAACTCTGTCTCCATAGAAGTAGACTTGTCTGGGTTCAGAACCAAAGAACTTGACACCTTCATCTTGCCGACAAGCCGTGATACACTGCTTGAGTTGCCTAACCAATCTTTTCTCCCTTGCTCTCCTGAATGGAACAAATAGACATAGTCAAGGGGCTTGTCATTGTCATGGGCCTTTGTAGGATTGGCAGTGTATACTGCCATAGGATTGTCCAGTGACAGTTCAAAGTGTGGAAGCCCATCCTTCCATATGCATTGTAGAAGCCCTGCACTTAAAGAAGATGGACATGAGGACAGAACAGGTTGATTTGAACTCATGGATGGTGTATCTGAGGACACCATCTTCTCATGCATGCTCAACTCAGCTGTGCTCTTCTTCAACGGCGACACGCCAGGGGAGGAGATCTCCCATGTCTCAGGAGATATCAGCTTCAGTATCTCTGACTGTGTTATGATGTGGGATTTTGACCGAGCTTTTCTCATCTTGGTTCCTGAGTGGAAGAATGAAGGACTTTTTGGCCTCGTTTTCGCATCAACAAGTGAATGCAAAGAATCCAACATCATTTTCTCCGAAGGACCAAGAACTACACTCCCTGTGCTAGCTCCATTGCTGATCATGTCATCAAGATCACTCACATTGTGGGTTCTTCTTGGGTGCCTCAGGCTTCTGATGAGGAATTCCAGTATCATCATCTTCGCAGGAAGTGTCGGGTACAAATCTGAATGGAATACTTCGCTCCTGCAAGAACATGGTGACTTGTGACATGACTGGCAGCTCCTGCTTTTCTTCTCATCTGATGGCAATGGCTGCTTGTAGATTGTCTGTCCCAAATCAGACTCAACCTCAGGTGTAGCAATGGACAGCTGTTGATGGTCAATTGCTGACCTTCCACTGAACTCTGGAGAGGTGCTATCTTCATCGAATCCATTTCTCCTTTCCAAGTAGACAAGTTCCATCTTTAGCTCTGGTAATGGGAACTCTACTACTCGTCGTGAAACGAGACCTTGATCACCACGTAACAAAATTTTGCCCATCGATCATGGAAGAAACGTGCATACGATTTTGTGGCTGGCCAATAAACTACAAAACAACTGAAATTATTGACAACTATGAAGAGAGAATGCCATGTTACTTCTTTCTTATGGAACATCCCCTCTTGCTCAAAACAAAGTCGTGGAAGAAACATGCACACTGCAGCTGGTGCAGAAATGTTTATACACACAAAATGCTTGGTATCAGTAGGATCTAACCATGAAAGGAATCTCTCTTATTCCTAATGGAAACAACCAATGATTGTTGCCAGCGATAATATTGTACCATCTCATCAGCAATAAGCTAATAACAGCACACAATTAATACTTTCTCCGTAAGATCATCTCGTACACTCCACCCAGGCACCCATAAATATAGTACTTTTGTAGTATCAGAACTCTGAATGCTTTCCTTCCAGTAGAAACAAAAGAGAGCAAGCTAGTACTAAGTGTACTTCATTGCTTAAAATGCACTGCTGAAACTGAAAGCAAGTAGCCTACTGAAGCATTAGATGTTGGATTCTAGCAAAATTAGTATCAGTACTTGAAAAACACAAGCCGTACAGGCACGGGAAACCTGATCAAGACTGCACGAGATGTACATAGGAAAAAAGGCAATACCGAACCAAATGAATTTACAAGTGTTGAATTATGCTTGAGAAACCAGAAAACTGACCTCTGGGATATTCTCAACTCTCAGTCTCTCTCACTTAATTCAGACCAAGAGAAGAAAGGGTGTGAGTGCCAAAAAGATCAAAGGAAAAAAAATAACCAAGAAGTTCTTGCTGCATCAACTATTGTGTATCAAGTCAACCGGAGAAAAGAGAAGTTGGTTAGAAATAAAACCAAAAGTTGCAGCGGCGCCCACGCTGCAAAAAGCACTACTACACTCCTAGCCCAACCAAAAAAGATGACCTTAAATGCATTCATCAACGGCTTAAAGAACGCATTCACCAGCACAACGCTTTGTTGCACCTTTTAACACGGCCAAAATGGAAGCCTAGGCACAAGAACACGTACAAAGGAAACAAGAAAGTTGAAACCATCTTTTCTCAAAGACTCAAGCAAGAGGCAAGCACAAAACAAACTTTACAACATAAACCCAAAGCTGTCAATTAAAACCAAGTGAACCTATGCTCGTTTCGTTTGCATGGTCACTCGAAGGCTGAAAAGAACAAAAGTGAACTAAAGATGATTCATCATTGAGTAGAAGTGGAGAGGGCATCAGATTCCTCACCTCAGAGCTCACCACGCAGCATCCAACGCCGGCCTGCAAGCTAAGCACTGTCTCCTGACCTCCCAACACAGAGCAGAACACCTCTTGTTGATGAGAAGAGTGTGCACTTGCAACAAAAACCTTGGGAAACAGAAGGAAAATGGACTAATGTGAAGTGTACAAGAACAGGTTAAAGAGCAAGAGGACTGGAAGGTTATATAAGAACCGGAGGCAACACTGAGATAGCCTATGACTCACCAACCGAAGGAACAAAAGAAAAACAAGATTAGGTGAAGAGGACTTAGGACCTAAACCAAGATATCAAAGGGACCAAGGAAGAATCAAGCCGATGGCACAAGAGTACCACTTACTAGAATGGATAAGAAGAGACAAAACAGTCAGCTTTTCTGCACTAGTAACAATCCCCCAAAACTAGCAATCAGAGTATCAGACGATCAGACACCACCAAAACCCAAAGGGCTCCAGGAGAAGGAAGAAGAAGAAGACGATGGAGATGGAGATGGCTGGCCGCTTGATCGATTTCCAGAACGGAGAGGAGCACACGGAGAGGCGTTAAGGAAAAAGCTGTCCTCTTTACTACTCACGCTCTCTTTTCCATCAATTCGACGGCAAATGAGCTGCCTCTCTCTCGGCAACGCGTGAGGCGTAGGCTACAGTTTCCATCCCTGCCTGCCTGCAAGCCAAGGAACAACCGGCTCGCGAAAGGATCGAAACGCCTACCACCACCGCATCAGATCAGCAAAACTTCCATAACTGGGCAGCTTATAACTCCCCTCCACCATTAATGGCTCATCAAGAACGGCAAGGAGTAATTGCGAGAAGAAGAGCAGCAGAGCGCGAGGAACAAGGAACAGGTGCAGAATTCAGGGAAGCTACTACTACTCCCACAAGCCTACTACAACTTTTGGCGCAGAAAAGGCAGAGACGAGACAGGGGAATGGCAAGATTACCCGGGATTGTAGTGGAGAAGAAGAAGAAGAAGAAGAAGAAAAGGCTCGGTTCCTACGCGCAGGCCGCCATGTGAAGAGGACGACTAGACTAGCGCACAACTAGCTGCAACTAGACT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0195900.1 | 3 | 2146702 | T | C |
| Osa03LNT0195900.1 | 3 | 2147502 | C | T |
| Osa03LNT0195900.1 | 3 | 2148995 | C | G |
| Osa03LNT0195900.1 | 3 | 2149768 | A | G |
| Osa03LNT0195900.1 | 3 | 2148308 | T | G |
| Osa03LNT0195900.1 | 3 | 2150128 | C | T |
| Osa03LNT0195900.1 | 3 | 2146188 | T | G |
| Osa03LNT0195900.1 | 3 | 2147553 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0195900.1 | osa-miR5796 | Translation | 4.0 | 23.171 | 1 | 21 |
| Osa03LNT0195900.1 | osa-miR5516b | Cleavage | 5.0 | 12.707 | 1 | 21 |
| Osa03LNT0195900.1 | osa-miR1437b-5p | Translation | 4.5 | 14.367 | 1 | 21 |
| Osa03LNT0195900.1 | osa-miR413 | Translation | 4.5 | 13.487 | 1 | 21 |
| Osa03LNT0195900.1 | osa-miR413 | Translation | 5.0 | 11.512 | 1 | 21 |
| Osa03LNT0195900.1 | osa-miR414 | Cleavage | 4.0 | 16.287 | 1 | 21 |
| Osa03LNT0195900.1 | osa-miR528-3p | Cleavage | 4.5 | 9.692 | 1 | 21 |
| Osa03LNT0195900.1 | osa-miR1438 | Cleavage | 4.0 | 17.906 | 1 | 22 |
| Osa03LNT0195900.1 | osa-miR1851 | Translation | 5.0 | 13.137 | 1 | 21 |
| Osa03LNT0195900.1 | osa-miR1882a | Translation | 4.5 | 12.864 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR1882a | Cleavage | 4.5 | 14.832 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR1882b | Translation | 4.5 | 12.864 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR1882b | Cleavage | 4.5 | 14.832 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR1882c | Translation | 4.5 | 12.864 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR1882c | Cleavage | 4.5 | 14.832 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR1882d | Translation | 4.5 | 12.864 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR1882d | Cleavage | 4.5 | 14.832 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR1882e-5p | Translation | 4.5 | 12.864 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR1882e-5p | Cleavage | 4.5 | 14.832 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR1882f | Translation | 4.5 | 12.864 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR1882f | Cleavage | 4.5 | 14.832 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR1882g | Translation | 4.5 | 12.864 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR1882g | Cleavage | 4.5 | 14.832 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR1882h | Translation | 4.5 | 12.864 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR1882h | Cleavage | 4.5 | 14.832 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR2099-5p | Cleavage | 4.0 | 14.822 | 1 | 22 |
| Osa03LNT0195900.1 | osa-miR2868 | Translation | 4.0 | 17.281 | 1 | 20 |
| Osa03LNT0195900.1 | osa-miR2868 | Cleavage | 4.5 | 7.414 | 1 | 20 |
| Osa03LNT0195900.1 | osa-miR2868 | Cleavage | 5.0 | 13.332 | 1 | 20 |
| Osa03LNT0195900.1 | osa-miR3979-3p | Cleavage | 4.5 | 21.309 | 1 | 20 |
| Osa03LNT0195900.1 | osa-miR3981-3p | Cleavage | 4.0 | 12.561 | 1 | 21 |
| Osa03LNT0195900.1 | osa-miR5082 | Cleavage | 5.0 | 15.729 | 1 | 24 |
| Osa03LNT0195900.1 | osa-miR5516a | Cleavage | 5.0 | 12.707 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0195900.1 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Osa03LNT0195900.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG348 | RZ329 |
| Osa03LNT0195900.1 | 3 | qFDN-3 | Physiological trait | Flowering | RZ329 | RG348 |
| Osa03LNT0195900.1 | 3 | nan | Morphological trait | Root | CDO20 | RG409 |
| Osa03LNT0195900.1 | 3 | qHDD3-2 | Physiological trait | Flowering | RG348 | RM231 |
| Osa03LNT0195900.1 | 3 | qHEJ-3 | Morphological trait | Shoot/Seedling | RM175 | RM22 |
| Osa03LNT0195900.1 | 3 | qST3-2 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0195900.1 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Osa03LNT0195900.1 | 3 | QSbr3a | Resistance or Tolerance | Sheath blight resistance | RG348 | RG944 |
| Osa03LNT0195900.1 | 3 | QSs3 | Physiological trait | Sterility | RG348 | RG944 |
| Osa03LNT0195900.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)