© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0196000.1
GAAACTTGTTATCTCTATTATGACAAGGAAACAATTCTATTTACAAATCAGTAGTGTGCAGAAACAATAACTTGACCTAAGCACTTCTCTTGCGAATAGAGCTTCTAAAGCATCAGTCTTATTTACTGGGAGCAAGGGAAAACTGTGTTTAATGCTTGCACAATTGAAAGGAAAACACACTTTAATTTGTGTGTTTATGAGAATTATATCCAGGATTCCACAGTGCTGTTGTACTTATAGCCGTAAGGGTTCATTCCACTCAAATGTGCCAAAATATTGGAAGAATCAAGCATGTCTTCTCCCTTCATTCCCACAACATGTTCATATTGTTCAAAATCTTGGGAGCTTGATCTGGTAGCTTCACAGAGTTCGTCGTTCTTGGCAAACCTTCCGCGGACCCGAGGCCTGCTATCCGCCAAGGTTTTTCTACAAGCGTACTTTATTTTTTTGCTGAAGTTCCTTTCGTTCCTTTTCTTTATGTACCTGGAGATCTTTTCCTTTCTCTGTTCAGCTGTTAGACGCACACCTTTGTAGGGGGTATCTTCCAAGCTTGAGCCTTCTGTTGAAGGCAACGTTAGTGGGCTATCATTGCATCCAGTTACCATGTGCTGGGTGTTTTCTCCCATCTGCATCTCTGCAGCGTTATTAAACGCCCCATGCATCGAATCTGTGTCGCTATATGTTCTGGTCAGTCCTTCACCTTCCATCATCCTCTGGTACTCTCCAAAATTATTCAAATCCATCACCATACCATTGTTACTAGTACTATTATGGTTGAAAAATCCTACTTGTGGTGTCTCCACATTGCAATTTGGAATCATTACTCCTGTTTGGTCATACAGAGTTCCATCCAGACCCATGTACCCTCCAGCTAGTGCTGCTGTGAAACACTCGTCGTCATACCCTGAAGCTAGAGGCAGCAAGGCATTGGCAGTCCTGTTTGTTTGCATTGGGGGCATTGGTGCATCTGTATGCTCTGGAACCATTATTTGGCTGAATTGTTCTATGTTGGCCTCGGTGGCAGCTGGATAGTATGCTGGTGCAGTAAAGGTTTCATCAATGGAGGGAAGTAGCTTGGTGTCCTGGTCAGGGTTTTGCTCTTGCTCAAGGAAGGCTGAGAGGGTGGAGTCGAAGGAGAGTAATGGGGAGAAAGCTGTGTCTGCAACAGCTGTGATGTCATTGCTGTTGCTGCAGAGGGGAGGTGTGGCTGTGGACGACGATGAACCATCCTCGGAAGAGGCTGCAAATTGCTCGGAGGTAGTGGCCACTGCAGCGAAGAGATCATCACCTAGGCCGTCATCGCAGAAATCAAGAATTTGAGCAGCTATGGGGCTTGAGAGTCCCTCCATTCCAATAAATTTGCACATGTATGACTATTGCAGCTCACAGGATGTCATAGAAAAAAAAAGATCTCTGGTACTGCTGCCACGGACCCAAATCCGAAAGGTTTCATGTTGATCTGATGCTTTTGAATAAAATTTCTACATCGTGCGTTCCTTTTTCACTATAGACTTCATAATAACTATTGTATCATGTATGCAGGTATGTACTGATTGGCACCGATGCAATCGTCGTGAAGCATTACTGATCCTCGACGGAGAGACAAGGGATTGGTTGCATTGCGGTGGAGCTCTTTTGGACCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0196000.1 | 3 | 2160179 | A | G |
| Osa03LNT0196000.1 | 3 | 2161285 | T | C |
| Osa03LNT0196000.1 | 3 | 2161594 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0196000.1 | osa-miR5536 | Cleavage | 3.5 | 24.642 | 1 | 22 |
| Osa03LNT0196000.1 | osa-miR167a-5p | Cleavage | 4.5 | 17.89 | 1 | 21 |
| Osa03LNT0196000.1 | osa-miR167b | Cleavage | 4.5 | 17.89 | 1 | 21 |
| Osa03LNT0196000.1 | osa-miR167c-5p | Cleavage | 4.5 | 17.89 | 1 | 21 |
| Osa03LNT0196000.1 | osa-miR396a-3p | Translation | 5.0 | 17.815 | 1 | 20 |
| Osa03LNT0196000.1 | osa-miR396a-3p | Translation | 5.0 | 14.748 | 1 | 20 |
| Osa03LNT0196000.1 | osa-miR396b-3p | Translation | 5.0 | 17.815 | 1 | 20 |
| Osa03LNT0196000.1 | osa-miR396b-3p | Translation | 5.0 | 14.748 | 1 | 20 |
| Osa03LNT0196000.1 | osa-miR167d-5p | Cleavage | 4.5 | 17.89 | 1 | 21 |
| Osa03LNT0196000.1 | osa-miR167e-5p | Cleavage | 4.5 | 17.89 | 1 | 21 |
| Osa03LNT0196000.1 | osa-miR167f | Cleavage | 4.5 | 17.89 | 1 | 21 |
| Osa03LNT0196000.1 | osa-miR167g | Cleavage | 4.5 | 17.89 | 1 | 21 |
| Osa03LNT0196000.1 | osa-miR167h-5p | Cleavage | 4.5 | 17.89 | 1 | 21 |
| Osa03LNT0196000.1 | osa-miR167i-5p | Cleavage | 4.5 | 17.89 | 1 | 21 |
| Osa03LNT0196000.1 | osa-miR167j | Cleavage | 4.5 | 17.89 | 1 | 21 |
| Osa03LNT0196000.1 | osa-miR444a-3p.1 | Translation | 4.0 | 18.551 | 1 | 21 |
| Osa03LNT0196000.1 | osa-miR444d.1 | Translation | 4.0 | 18.551 | 1 | 21 |
| Osa03LNT0196000.1 | osa-miR5511 | Cleavage | 4.5 | 23.673 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0196000.1 | 3 | qHEJ-3 | Morphological trait | Shoot/Seedling | RM175 | RM22 |
| Osa03LNT0196000.1 | 3 | qST3-2 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0196000.1 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Osa03LNT0196000.1 | 3 | QSbr3a | Resistance or Tolerance | Sheath blight resistance | RG348 | RG944 |
| Osa03LNT0196000.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0196000.1 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Osa03LNT0196000.1 | 3 | QSs3 | Physiological trait | Sterility | RG348 | RG944 |
| Osa03LNT0196000.1 | 3 | qHDD3-2 | Physiological trait | Flowering | RG348 | RM231 |
| Osa03LNT0196000.1 | 3 | nan | Morphological trait | Root | CDO20 | RG409 |
| Osa03LNT0196000.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG348 | RZ329 |
| Osa03LNT0196000.1 | 3 | qFDN-3 | Physiological trait | Flowering | RZ329 | RG348 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)