© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0197400.1
CTCCAGAAGTGGTTGGATAAATTCAAGACGGTATGAACTTATCTGACATGAACAGTAGCTGGCTTACTAAGTGAATTCCTTCCTCATCTCGGCAGAAGCCGGAAACTATAATTACAGCGAAGAGCTTTACTCCTAAATCCTAATAACAACCGTTTCAATTTGTACAAGAAAGATCTCATCCAACAAGATCGGTGTGTATATAATCTGTGTTCTCCCATGTTATGTTCAGGGAGATCAGGTCACAAATGACCCTGTCAAATCTCCGAGCGAGATGCCACCATGAAGGCATCATGGTGCTGTAACAATCAGTGGCAGCAACTTCAGATCTTCAGAGATTAATTATGAGATCATAAAACTGCCCTCTCTCTTTGCTCAGTCATGATTCTTCGCAACTCTCTCAAATGTGCAGTTATCTCTTGAACACATTGTACGCCATCATCACTACATTTTAGAGAGCTTAATATCTGTTTGAGAAACTTTTGATCTGTTTCAAGTGCCGTGAATCTAGTATTTAGAAGTGAAATCTCATGTTTAACGCTCGTCATAGAACTGATTCTGCCATCATCTAGGTGAGAACATGAGCCGGAATCAACACTTTGATTTTCATCAATTTGTTGAGAAGAAACCGGCTCACCGCTCCAGTGTTCCGGATGCAATACTGACATGTTCTGTAGACTATCATATGTGCCACCAAAATTATGCCTATCTGTGGAAGACATGCCCAGTGTTTCCTCCAATTTGCTCAAGGATTTCAAAATATTTGCCTTTTCATCCTCAAAATCAAACATGGTATCCCTCATGAAATCTGAGCTATCCAAGACTCCAGATGCCATATCTCCATCAGTAAAATCAAACTTGCAACCAAATGGTTCATGAAGCCTCCGATAATTGTCAAGTTCAGCTTCCAGGTCAAGCATTTCTTTCTCCCTTTCTGTAAGCAAGTCATTTAGCCTTTCAATTGCTTCTTGGTCATGATCAGCCTGCTCTTCCATCATCCTGAGGTACTGAAGTGCCTCCATGTGCATTGAAGCCTTTTCTTCCTGCAATCTATTGATCATAGCCATTGCTTCACTCGCAGCCACCGCTGAAGCACTCCGCTCTGCCTCAAACTCCTTATAAAGGATACTCATTTTTTTCTTGCCAAGCTCAACCTTCTGCTTCAGGCCTTCGAGTGAGGTATCACCTTCATCTTCACTAGTAGCATGGACATCAAATGGTTCCATATTTGAGTAGTTAGTCTCAAGAAATTGTCTGCTCCCAGTGGCATCATATTGTTTATCATCAATCTGTGTGATTCTAGGACTAGCGGCCACCTCACTCCAAGGACCATCAAAGCCTCGCGCAGAAGACATCTGGGACAGGAATGTCTTGACTTCTTGGTTAGTTCTTGAACTGTTATCCTTAGCAGAGATTATTTCAGACCATCGAGGAGATTGAAGGTTGCTTCTACGACGAGAAGCACTCTTCATACTGTTTTTGCGGTTGATACAGGCATCTAAAACTGAACTCATTCCTGCATTTGCAGAAGCAACAAAACCCTTAGCAACTTCCTCGTCAGGGCTTCCTGAAATACCCGCTGAATCGTCAACTTCCTCAATACCAACCAGAAAAGTTTTCTCTTTCGGAAGCTCTGCGCAAACTTGTTCAGGCACAATCTTCGGTTGCACGTCATGATTGTTTCCACTTACATTGACATTGCTCAAGCTAATTTCCCTTGAACCTTGCGCAATATGCTCTGAAGATTTCGCTGCACTAACAAGGTTGGTGCCAGTGGCCACATTGTCAGTTTTTGCTGCAGTACTCACTGGCACAGGAGCGGTATTCATCGGCTCTGCAAGAACAACATTCTCAGAAGGATGCATGGACAAGCTGTTGGTGTCACTGATCATAGGTTGTAGTTGCGAATCATGAAATAAGAAGTCTCTGCTTCTCTGCGTAGCTTTGTGAATCATTGAATTACCATCTTCATCTTCATCATCATCCGAGATGCGGTTCTCAGACTCTGAATCATGGCGGACATTCAGCTTACTGTAGCCTCCATAAGACAAGTCCTCAGAACCTTCATCTGAAGAATGCCCTACACTAGTCATGTCTATGCTTCTCTCCTTCACTGTGCTCACATCATCTGGAACTATGCCATTTGCAAGCTCAGGTAGCTTGTGTGTATGCCGTGTCTTCTTAAACGTCTCTGAACAACAAGAGCATAAATGTGTATGCCTGGACCTCGGTTGAGAATTCACCTTGTCCTTATTTCTCATGCTCTTCAGTTTATTGGGCTTACCATCCAAACCAGCACATGAAAGTAGGCACCTTTCACACAGATCATCAGAGTGTGCGAGCTTGTTGTGACTCTGGCAATACTCCAATTGCGAGATTTCCAACTTGTGTGCAGCACAGATCAGATCTTCAGAGAACCAGGTGTTTCCATGCAGGAGGCGATCCAACCTTGAGCACAGGATGCACGGTGGTCGTAGGCTCCAGATGCGTGCAAACCTTGTGGCCGTGAATGACACCACGGCGGTCACAAAGAGCATTATGATCAGGCTGCATTCGCTGAAGGCATGGCACAGCACAGGCCAGAATTGCCGTGCAAAGTCCGGCGACCTTGCACGAGCCTTCGCTGCCATCGAAGATCAATGCACCGCTGATTTGCATGTAGGTTGATTAAAAATCAAATCCTTTCCACAAAATTCCTATTAATGTGGCACAAAGATAATCAGATCAAACCACATTGTTGAGGAGGAAGCGCTTGTAAAATCATGGTCACCCATACCAACGTGTGGTTCCAGAAGATGAGGCCTTTCACCTAGAAAAGTTCACAATGCTACAATGCAGCAGTACCTTCAGCTGCGCTAAGCCAAGAACGGGACATTTTTTCTTCATATGCCAATGATCATACGGATAGATCGCAATAACCTAATCTTTTTACCAATTGGAGCAAGGATCCAATCTTCCCAATGCAGCAGATCTTCAACCAAGAAGCTGCGATTCCCATAATCACCAAATCTGGAGCATATTGGAGAGGAACAGAACAAATCCGTGTAGTAAAGATCAACCAAAAGGCCCAGAAATGAAAAAAAAAAATCCCCAAATGAAATTTGGAAAAAAAATGGTTCTTGGTTGCACAGGAGGCAAAACGATTCTCCCCTCACACTGTACGATTGGAGAGGAGAGAGAAGAGGGGAACAGATGTCCTCCATCTCTTCCCAAAACACAATCCTTTGCATGTGATGTGAGGCTGAGAGATTTAAGCATAGCCTCACGTTATGGTAAAGAAAACCATCAAAGCTGATAAGGAGCCAGAAGAACTGAACTACTGAAGAAATAATGACTGGTTCATTTTATTTTCAAATAATTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0197400.1 | 3 | 3483142 | G | A |
| Osa03LNT0197400.1 | 3 | 3483298 | A | G |
| Osa03LNT0197400.1 | 3 | 3484027 | A | G |
| Osa03LNT0197400.1 | 3 | 3484455 | T | C |
| Osa03LNT0197400.1 | 3 | 3484636 | G | A |
| Osa03LNT0197400.1 | 3 | 3485072 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0197400.1 | osa-miR5828 | Translation | 5.0 | 13.382 | 1 | 21 |
| Osa03LNT0197400.1 | osa-miR5829 | Cleavage | 4.0 | 13.181 | 1 | 24 |
| Osa03LNT0197400.1 | osa-miR168a-5p | Translation | 5.0 | 11.702 | 1 | 21 |
| Osa03LNT0197400.1 | osa-miR168b | Cleavage | 4.0 | 17.012 | 1 | 21 |
| Osa03LNT0197400.1 | osa-miR1425-5p | Translation | 4.5 | 14.714 | 1 | 21 |
| Osa03LNT0197400.1 | osa-miR1875 | Translation | 5.0 | 14.352 | 1 | 24 |
| Osa03LNT0197400.1 | osa-miR1862e | Translation | 3.5 | 19.691 | 1 | 24 |
| Osa03LNT0197400.1 | osa-miR1879 | Cleavage | 4.0 | 11.078 | 1 | 24 |
| Osa03LNT0197400.1 | osa-miR2099-5p | Translation | 4.0 | 20.638 | 1 | 22 |
| Osa03LNT0197400.1 | osa-miR812o-5p | Translation | 5.0 | 21.169 | 1 | 21 |
| Osa03LNT0197400.1 | osa-miR812o-5p | Translation | 5.0 | 13.447 | 1 | 21 |
| Osa03LNT0197400.1 | osa-miR5156 | Translation | 4.5 | 17.335 | 1 | 24 |
| Osa03LNT0197400.1 | osa-miR2275c | Translation | 4.5 | 23.279 | 1 | 23 |
| Osa03LNT0197400.1 | osa-miR2275d | Cleavage | 4.5 | 15.199 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0197400.1 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Osa03LNT0197400.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG348 | RZ329 |
| Osa03LNT0197400.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RM231 | RZ329 |
| Osa03LNT0197400.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RM231 | RZ329 |
| Osa03LNT0197400.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RM231 | RZ329 |
| Osa03LNT0197400.1 | 3 | qFDN-3 | Physiological trait | Flowering | RZ329 | RG348 |
| Osa03LNT0197400.1 | 3 | qHEJ-3 | Morphological trait | Shoot/Seedling | RM175 | RM22 |
| Osa03LNT0197400.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0197400.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0197400.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0197400.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0197400.1 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Osa03LNT0197400.1 | 3 | rn3 | Resistance or Tolerance | Drought tolerance | RM231 | RM175 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)