© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0197500.1
ATCGCAGCCACGACAGGGAAGCACGGTGTTCTTAACTTCAGCAAAGCCAGGTGCATCTGGATGCACCAATGATCCTAACAATCCTTTTCCTGAACTCACTTGCCGTTTCCTTCTGATCAATCACGTTCTGTTGATTGTGACTCCTTAGCAAGCAGTACTCGTCTGTCTGTATCATGGCATGACTAAAAGAAACATCTTTGACGTAAGGAAGATCCAGTAATAGCAAATAACCTCGCAGATCATTATGGAATCTGTATGTTATATGTAGATATCTCAGACATCACGATGCTTTGTGTACTAATATCTCTCACCAACTAGGATTTTCCAGTGATCTTCCAAACTTCTGGTTCCCTGAAAATTTAAAGGTGTACTTGATTTCTCCAGTGCCCCGAAAACAAAAGCACAACCCCGGATAGCAAATTCCTGGGTCTTGGCGAAGAAGTATATGGAACATGTTACCTGATGGGAGAGACTTCCACAAAATTAACCAGCAGCCTATGGAAATTACAGTCACGCCCTGTTTAGATTCCAACTTTTTTCTTCAAACTTCCAACTTTTCCGTCACATCGAACTTTTCTACACACACAAACTTCCAACTTTTCCATCACATCGCTCCAATTTCTTCAAACTTCCAATTTTAGCATGGAACTAAACACAGCCTCAGTGTGATGGTACCAAATCTCAAACAAAATTATTGAGGGATGGAATGCAAAAAAAAAGAAAAGGAAAAAAGTAACTCAACCAAGCACCACTGTTGTCAAGAGAAAAATAATACTCAGTAGATGTTTAGCTTCTTGCTGGTCAGAAAATGGATAGCATTACATCTTACCAAGTCATACTCAAAATAGTAACTTGGTATCATTTATCATGGTTGGTTCCACTAGGTCAATAAGTAGAAGAGTGGCATGAAGAGACTAGAAGATGTTATAGTGCCAACTGCAGAATATTAAAATTTCTCACCTTCAAATCCATAGGCATTTGTTTCAGACTTTCAGCAGAATTCTGAATATTCACAAACTGCACAGTGCCTGCAGCCCTGCGTTTCTCTTTCCTAAATTATCCAATGGCTCTACGGAATCCAATAAAGAAGAAAATGAGGACCCTCAGAATTTATCGTCAGGAGCAAACCCTCTTTGAAGCATCTCATCATGAAGCTGGAATGCCTCCTTCGAGTTGCCAGCTGTGACATGACCATTTATCATAGACATGTATGTATATCTATCTGGTTCAATTCCTTTAGCACACATTTTCTCAAAAATCCAACCAGCTTCTTGCACATTACCATGTACAGAAAACCCATTTATGAGCATATTATATGTGACAACATCTGGTTGAACCTTTTCCTTCTCCATCATGTTAAGCAACTTAAAAGCATCGTGCATCTTATCTTCTTTGATATAACCATGGATTAGGGTGTTGTAAGTAATTAAATCAGGTGACACCTTGTTGACCATCATCTTTTGCAAGAACTTCTGCCCCTTTGAAACATTTCCAGACCGGCAATAGCCCTTAATGATGGAATTATATGTCATGATGTTTGGCAAAATGCCCTTATTTATCATTTCATCCAAAAAACCAAATGCATCTTCCACTTGTCCCTTCTCACAGTGACTGTCGATTAGGATACTGTACGTAACATGATTGGGGAAGATTTCACGAGAATGCATATCATCCCATAGATCATTGGCTTTGTCAAGATCACCTTGTCTGCACATTCCGTCGATCAAAGTATTATATGTTACTATGTCTGGCCTCAAACGCTGGTTCAACATTGTGTCAAACAGTTGCAGCGCCTTGTCTAGTTTACCCTCTATGCAATACCCGTGAATCAAAGTTGTGAAGGTACATAAATCTGGTGGAACCCCTCTCTCCCTCATCTCATTCAAAAGCCCTTCTGCATCTAACAACCTGCGCTCTTTACAGAGCCCATTCAACAAAGTATTGTAAGTTACCACATCTGGCAAACATCCACAGCCAACCATCTCATCCCTAACTCTCAGAGCATCTGACATTAACCCAGCCCTACAAAATCCGCCTATTACCATTGTGTAAATCACACCATCGGGTACCAATCCAAAGCACCTCATCTCCCTCAAGTACGCCATCGCATGGTCCATCTTCCCCCTCCTTGCAAACAATCCAATTAAGCAACTAAAGCTCACCAAATCTGGTTTAATACCACGGTGCCGCATCTCCTTGTAAATCTTCAACGCCTCCTCAATCTCCCCAACTCTACAAAATCCCCCAATCAAAATGGTAAAACTCCGAACATCAGGCGCAACACCAAAATCATCCATTTCTTTGAACACTTCCCATGCTTTATCCCACATCCCACTCCTACATAACCCTTTCAGAACCGAATTATACGTCACAATCCCAGGCTTTAGCCCTTTACTAACCATTGAGTCAACCAACGCCATTGCTGCCTCCGCGTCCCCAGCGCGAAATCTAGCATCAACCATCACATTATGTGTAACCACATCAGGAAAGACACATCTCTTCTCCATCTCGGAGATGACAGCGTCAACCTTGTCGAACTCCAGGGCTTTGCAGTAGTTGTGGACCATTATGTTAAGCGTGTACGTGTTTACCTCGGAGTTGGAGGAGAAGACAAGGCGGTAGGCGTCCGCGGCGAGATGGGGCCATCCGGCGCGGGAGAGGGCGGCGAGCAGGGCGTTGGAGGCGGCGGCGGGGATGGGGACGCGGTGGTCGAGGATGAGGCGGAATGCCTCGAAGGCCTCGCGGGGCTTGCGGGACTGGGTGTAGGTGCGGATTAGGAGGTCAAACACCCGCGGCTGCGGGGTGGGGGAGGAGCCGAGGAGGGAGGAGACGATCTCGCGACGGCAGGCGCCGCGGCGGCGCGACATGCGGAGGAGGAGGGACTGGCATTCGGAGGCGCGACCGGCGGCCGCCGCGGCCGTCGCGGCAGCGGCCAGGTCGGCTGTTGCGGGCTTCCCTCCGCTTCCACCGAGGGCGGCGGCGAGACCTGCCGCCGAGCGTTTGGTGGTTTCGGCGGCCGCGGCGGCGGCGAGGCGACGGGGAATCGCCATTGGTGACTCGAGGAGTCGAGGTGTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0197500.1 | 3 | 3501353 | A | G |
| Osa03LNT0197500.1 | 3 | 3502230 | C | T |
| Osa03LNT0197500.1 | 3 | 3502651 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0197500.1 | osa-miR5529 | Translation | 4.0 | 23.234 | 1 | 21 |
| Osa03LNT0197500.1 | osa-miR395t | Cleavage | 4.5 | 3.582 | 1 | 21 |
| Osa03LNT0197500.1 | osa-miR395c | Cleavage | 4.5 | 3.582 | 1 | 21 |
| Osa03LNT0197500.1 | osa-miR171i-3p | Cleavage | 5.0 | 9.961 | 1 | 21 |
| Osa03LNT0197500.1 | osa-miR1429-5p | Cleavage | 4.5 | 14.751 | 1 | 21 |
| Osa03LNT0197500.1 | osa-miR1432-5p | Cleavage | 5.0 | 18.7 | 1 | 21 |
| Osa03LNT0197500.1 | osa-miR1850.1 | Cleavage | 3.5 | 4.008 | 1 | 21 |
| Osa03LNT0197500.1 | osa-miR1850.1 | Cleavage | 4.0 | 4.778 | 1 | 21 |
| Osa03LNT0197500.1 | osa-miR1855 | Translation | 4.5 | 13.596 | 1 | 21 |
| Osa03LNT0197500.1 | osa-miR1879 | Cleavage | 5.0 | 10.006 | 1 | 24 |
| Osa03LNT0197500.1 | osa-miR1879 | Cleavage | 5.0 | 13.102 | 1 | 24 |
| Osa03LNT0197500.1 | osa-miR2905 | Translation | 3.5 | 12.506 | 1 | 21 |
| Osa03LNT0197500.1 | osa-miR5145 | Cleavage | 4.0 | 11.398 | 1 | 24 |
| Osa03LNT0197500.1 | osa-miR2869 | Translation | 4.0 | 14.483 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0197500.1 | 3 | qHEJ-3 | Morphological trait | Shoot/Seedling | RM175 | RM22 |
| Osa03LNT0197500.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0197500.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0197500.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0197500.1 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Osa03LNT0197500.1 | 3 | rn3 | Resistance or Tolerance | Drought tolerance | RM231 | RM175 |
| Osa03LNT0197500.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0197500.1 | 3 | qFDN-3 | Physiological trait | Flowering | RZ329 | RG348 |
| Osa03LNT0197500.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG348 | RZ329 |
| Osa03LNT0197500.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RM231 | RZ329 |
| Osa03LNT0197500.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RM231 | RZ329 |
| Osa03LNT0197500.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RM231 | RZ329 |
| Osa03LNT0197500.1 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)