© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0197700.2
ATGGAAATTCTGTAACATTTCAATGTAAGCACCGTGCTCCCAAAAACATATCCCTTCCCCAACATTTTCCAACGAATACAACCAGTTTTGCATCACAACTCGCCCTTCTCCAAAAACTAATGAACACCACCCCTATAGCCTTCCCATGGTAAACACAACTCTGTACATCGTCGATGCATTCGGATCAGCTTCAAAATAAATTCAGCAATGCTTATGAATCTCTGAAATTTTCTCTATCCTCTAGATGGCAAACGATCGAATGGCCACCCTCCCACTCCTATGCCAAAATCTTATTGACAGGATCAGGGATCAGAACTATACCGAAGCTCCAAAAAACCTAAACAAAAGGATTACTGGCTTTTCTATTTCTAGTATTCTCATGTGACCGTTTATTTATGACGGGGCATGACAAAACTAACTGATCAGTGCAACTGCTGAATTACCACTTTACGCCTTTATCCCCCACAGCTCAAAACGAATTTGGTATCAATTTCTAATCTTCACAACACCACAAGGAAAAGCCTATCTGAAGGAACAATTACTTTGCAGCTTCAAAGAAGAGCACCTGAGGTTGCAAGTGACCTTTCTTACACATTACGAGCACATCATCCCAATTACCAACAACCTTCACAGTCTGGTCATCGTACATGACCCACTGCCCATCCTCAAAAGCAAAGCAATGATAGTGTTGCCCGTAGTAACAGACCACTGACACCAGAGAATGTTTGCTTCCTTGGTCTAGACCACGGTAGAAAGTACTGATGTCTATCTCAGTTGAAATACCAGCCAAAGTTCCAGATATGTCATCCACACTTTCTTTGTTGTTCTGCCACCCCAAAACAACTGTAAAAACATGAGGGGGGCTAGAAAGAATGTGATGAATATGGTTTGGTTTTCCACAACCACCATCTTCTGGATCACAAGCTAGATGGTCATTCATTATCACAATCTTCAAAAGATCATCAAATGAATGATCTGGAAACATATCCTTTGCAGTTCGAAGTGAACTAGCATTGATATTGTGGAAAAATGAAGTGTACTTGAGTCGTCTTGACTCCAACCGACAACTCTGGCAGTTCATTCGTTCAAGGATATCCATTCCAAAAAGACAGTGTGCTATGCAGGAACTACTTGCACAATCCCAGGAACCAATATAATTGATCTCATGAGATTTAACTTGGCAGTCAGCACGAGAAGTGTATGACTTATGCAAGCACTCAAAGATCACCCCCAAAACCTCAGATGCATCATTCATTTGCCCCTCCTGAAAGAATTTGCTGTTGGGGTAGGATTTGCTCAAAGCGATCCTCAAAGAAGTAGGTGCGACAGCTTCCCCTTGCTCCTCTGATGCTTTGCTCAGATCAGTGAAGATATCATACAATGCACAGACAGCACAAGGATCTTCAACATGCTTATGCAGCGATGATGTTTTAAGAAATCCATCACGAAACCGCTTTAAATGCCATAATGACTGGATAATCACATTCAAGAAACAATTGTATTCACCAGCAGCATTTTTAAGGCCAGTCCCATAGACTTCTTTTTCATTAGAAGTGCCAAGGCTTTGAAGCACAGCTCTCTCAAGGTCTGCTTTGAACCTTTTGTCATCCTCAATGTACAGATTTGTTGATGGGATTGCACTACTGTCAACTTTCTCACTACTTGAATTCTCTCTTCCAGCGGAGTGAGCACCATGCACACGGTGTGAATAAGACAATAGTGGTAGCTGATTTTGTTTTGTGTCTTGATAACTGTGATTGGCAGTGTCAACTGCTTTACCAGAACTGCTCCATCTTGAAACTGGTGAACCAGATTGTCGAATAGATGGCCTAGTATCATCATCACCATCGTCAACAGGAAAAGTGCCTGTCACACCTTGAATGTACTTTTTATGAGCTTGGCTGGTACTTCTCCTAGACTTTTGGGTGCTAGGAATAGTTGGAACCTTTGTATTTTCTGCATTTTTCCCAACTCCATTCGCTTTCAGTGTAGCCTTTGTATATTCTACATTTTTCCAAACTCCATTCACTTTCACTGTAGGCTTAATAAGGTCCACATCGCTGCTGGCTATTGGGCGTGTACCAGGATAGCCCAGACCATTATGTACCTCGTTATGATTTTTCTCCTTTGTTTGCAGAAGATCAGAATCACATGATCTCAAAATAGAATGTTCTTCCTGCAAAGGAACTTCAGAAAACCGAAAATCACCAAAATTTATGCCCTCAAGATGAGTGTGTGAGTTATTTTGAGCACAATGGTGCTTATCCTGATCCCCGTTCAAATTCACATCAGTCCGAAGGCAAGCTGACCCATCGGAACCTGGTGAAGTCCTTCTGTGTTGTTCTGCAAGATGCTTCTTCTTTGCTTCCTCCTCTATCCATCTTTGGTACTCCAAAGTTTCCTCCAACTTTCTTTCCTCTGCTTCAAGTCGTAATCGATTCCTGAATTCTTCTTGATCATTTAAGTAATTATCACTTGTTGAAAGTGATTGCTCTGATGTCTCCTCGTCTACACTATCTGGGCGGACGAGGTACTGATCACTCCAGCTCAAATCCTTAAGATCCTTAGATTTTCGAGAATCCTTCACTTTCTTCTTGTCCTTTGACTTATCATGGGATTGTTTTGTGTCGCTCACTTTGTTTGCATTTCTCTTAGCATCCAAAGCAAGTTCAGCCAGGAAGGCTTCACTTGCAGCATCAGATCTCTCCCTAGCATCCTTGTCCACCAGCTCTTCCAAATGGGTTCGCAAGAATGATTTCAAAAGGGGAAGGATAATTGTTCGGTAATCAAGGACAGAAGCAGGCCCAAGCTTGAGTTTCAGCTGCTCAATCACGGCTGAAATTCGCATAATCCTAGCATCTATCTTGTTAAGCTCCATAGCAACATGTTCCTTCAGTCTTGAAACAACCAACTGTACCACCGAATCGTTTGAATGTTCAAAGTCATAAAAACCCCATTCATCTTCCTCTGTCCCATCATAGTCACGATGGTTCGAGGTCATGCCAGAAAAGGTTTCATCGTATCTAAAAGGTGCTGTTTTAACTTCCCTTAAGATAGTAGAGATAGCATGTAGCTCAGATCTGCAACCGCTAAACAATTCCTCAGCATTGAGCTCCAGCTGCTCCTGTCGCTTCTTTAGGAGCTCCTCATATCCTTGAAATGGATAGGGATCCACGTCGTCCCTCCGCCTTTGCTCTTCACATAAAAGGCTATCCACAGCAAGCAAGCCCTCCTCACTGCTCAGCTGGTCATGCTTCTGTTCGTACGAGTTCTGCAAGGCTGAGAACTCTTTCTCGAGCTCATGAAGAATGTGCGTGCACTGATCAGACCTCACATCAAGCATATGGTTCCAGTCCAACAGCTGCTCTTCAACTGAAGGTCCAGTATATAACCATGAAAGGAATGGGTCAGCAACAACATTATCACGGTCAGATCTCATTTCAAATGCCTGGCCATCAAGGATAAGCAATGATGAATCAGAATCAAGTGTAACCTTCTCCAAGTTACTGCGATTTTTTGGGAAACTATCTTTGTCAGCTACTTCCTCATCCTTATCTGTGTTCCTATCATTAAGTCCACTAGCCTGCATAAGTTCCTGCAAGAATTTGAGCACCTTCCGCAGTGATGATACATCCAAGAAACAAATGCAGAGTGGTGACTCATCCAACGAGTGGTTAAGCAGCAGTGACGCGGAATGCATCTTCCTGAGTTCCTCCATAGTAATATGTAGAACCTTGTTCAGATGGCTCAATGAAAGATTCTTGTGTTTCACGAGGATTTTGAACAACGAATGGATCCTCTCTAAAATATTTGCTCTTTCCTCATCATCAGACAGTGGCCACTTCCTGTCACCTTCCCTTGTCACGGCGCCAAAACTTTCACACTCCTCGTTGTGTGGCGAGGTTGAGGAATCTGATGTGTCTGATTTATCTTTTGTACTCCAAATATCCGATGACATTGAATCTTTGTCCCTATCTGAGCCAACATTGTCAGCTAGTTCTTCCTCGAGAATTTTCAGTGCCGCAGTAGCATCCACCGGCCTCCAGGTTGAACCAGTGAGCTTTTCTGCCCAGGCATCATCAATCTCCTCCGGCACCACATCATTCAACCGGGGAGGTAGTACACCCACATGTTCCTCCATTGCATGATGTACATGTGATTCAGCATCAGCAAAATGCTCCTCACACCGGCCACATACCAAAAACTCCCATTTTCCACTCCTAGTGGCAAACCTTATCGCCTCGTTAAGCACATCAGATACCAAACTGGCAGCATCTTTCTCCTTATGCATCGCAGTAGCGTAGTGTGACTTGAGCTCAGAAATACTGGTGCTTAAGAATGCAAGCCTCCGATCCATGGGCACTGTGGCCCAGAACTCACGCACCTGATTCATGCGACCGGACACTGGCGAAGCTGCTGCCTTCCTGGACCCACCCTTCCTCCGGTCAGCGCGATGCCCAGACACTGATGACTGACACGACGAGGAGGGGGCCTCATCCCCCGGTGACTGTGATTGGGAGGTGGATGATGAGGCCGATGTGGCATTGTGCTTCTGCTGCTCCATCAGCCTCATCGCAGCAAGCCGCACCTCAATCTCCTTGCGCCGCTCTTCAGGGGTCTTATTAGCCTTCTTGATCTCATTCGGGCGGCGCGGCGCAGGCGCAGCAGGCAGGAGCCGGACCTCGGAAGAATCGTCGGCGCCGCCGCGGCGAATGGGGAAAACCCGAACCTTATCCTCAGGTGTGTAGCCCATGTTCATGTTCTTAACCCACAGCGAGATGGACGTCATGTTGGACCTCTGCAACAGGTTGCTGAGCTCGGCCTTGACCTGCTCGACGTCCGGGGCCGGTAGCCTGAGGGAGTGGGGCGCCGGGTCGGTGGGGCTCTGGATGGCCATCCCGCGGTTGCACTCGCTGCTGGCGGCCTCGTACCCGGTGGTGTCGGAGGCGATCTCGTAGAGGAGCATGGCGTGGAAGTGGGCGAGCTCGATGGAGTCCGGGGCCAGCTCGACCGCCTTGCGGGCCGCCTCGAGCGCGAGCCGCTGGTGCCGCGCGCGGGAGACGGGCTCGTCGAGGACCGCGGCGTAGCGCGCCAGCACCGTCCCCTGCGCGCGGAGCAGCAGCGGCGATCCCTCCCCGTGCTTCCCGACCGCGTCCTTCACCACCCGGAGCGCCTTCGCGTGGTTCCCCCGCTGCAGCGCTGCCAGGGCCTTCTCGCAGACGGCCCGGACCGCGGCGCCGCCATCCGCCGCCGCCGCATCGGGGTGGCCGGCCGCCGGAGGGGAGGGAGGAGTAGGGTTTGCGGCGGCGGCGGCGGTGTTGAGGGTTCGCTTCTTTCGGCCCATGGGAAAGGGGAACGAATGAGATTGGAGGGGGGGGAGGGTGCGCGATAGAAAATGGCAATCGAATCGCGATTTCGACTTGGGGTGTGGGTCCCACACCCACCACGCGACTCTCTCTGGAGGTAGGTTTGCTGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0197700.2 | 3 | 3544983 | G | A |
| Osa03LNT0197700.2 | 3 | 3543519 | A | G |
| Osa03LNT0197700.2 | 3 | 3540137 | T | A |
| Osa03LNT0197700.2 | 3 | 3540271 | T | C |
| Osa03LNT0197700.2 | 3 | 3540532 | G | A |
| Osa03LNT0197700.2 | 3 | 3541206 | C | T |
| Osa03LNT0197700.2 | 3 | 3541207 | A | G |
| Osa03LNT0197700.2 | 3 | 3542665 | C | T |
| Osa03LNT0197700.2 | 3 | 3543060 | T | C |
| Osa03LNT0197700.2 | 3 | 3544690 | T | C |
| Osa03LNT0197700.2 | 3 | 3545366 | G | A |
| Osa03LNT0197700.2 | 3 | 3546433 | C | T |
| Osa03LNT0197700.2 | 3 | 3546806 | G | A |
| Osa03LNT0197700.2 | 3 | 3547319 | A | G |
| Osa03LNT0197700.2 | 3 | 3547514 | A | C |
| Osa03LNT0197700.2 | 3 | 3548100 | G | A |
| Osa03LNT0197700.2 | 3 | 3549886 | C | G |
| Osa03LNT0197700.2 | 3 | 3540101 | T | A |
| Osa03LNT0197700.2 | 3 | 3550005 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0197700.2 | osa-miR5818 | Cleavage | 5.0 | 16.824 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR5820 | Translation | 4.5 | 11.041 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR5830 | Cleavage | 4.0 | 23.347 | 1 | 24 |
| Osa03LNT0197700.2 | osa-miR6250 | Translation | 5.0 | 13.929 | 1 | 22 |
| Osa03LNT0197700.2 | osa-miR156f-3p | Cleavage | 5.0 | 24.564 | 1 | 22 |
| Osa03LNT0197700.2 | osa-miR156h-3p | Cleavage | 5.0 | 24.564 | 1 | 22 |
| Osa03LNT0197700.2 | osa-miR156j-3p | Cleavage | 4.5 | 24.564 | 1 | 22 |
| Osa03LNT0197700.2 | osa-miR393a | Cleavage | 4.5 | 14.478 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR156l-3p | Cleavage | 5.0 | 24.564 | 1 | 22 |
| Osa03LNT0197700.2 | osa-miR166l-5p | Cleavage | 5.0 | 22.635 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR172a | Translation | 5.0 | 18.789 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR393b-5p | Cleavage | 4.5 | 14.478 | 1 | 22 |
| Osa03LNT0197700.2 | osa-miR393b-3p | Cleavage | 4.0 | 21.095 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR172d-3p | Translation | 5.0 | 18.789 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR535-3p | Translation | 3.5 | 18.906 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR395v | Cleavage | 5.0 | 13.838 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR1427 | Cleavage | 5.0 | 20.854 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR1436 | Cleavage | 5.0 | 13.171 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR1436 | Translation | 3.5 | 19.182 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR1865-3p | Cleavage | 3.0 | 14.451 | 1 | 24 |
| Osa03LNT0197700.2 | osa-miR1874-3p | Cleavage | 4.5 | 19.774 | 1 | 24 |
| Osa03LNT0197700.2 | osa-miR1874-3p | Cleavage | 4.5 | 12.929 | 1 | 24 |
| Osa03LNT0197700.2 | osa-miR1320-5p | Cleavage | 4.5 | 18.894 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR2869 | Translation | 4.5 | 20.661 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR2876-5p | Cleavage | 5.0 | 14.374 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR5151 | Translation | 4.5 | 8.296 | 1 | 22 |
| Osa03LNT0197700.2 | osa-miR5521 | Translation | 4.0 | 13.874 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR5521 | Translation | 5.0 | 15.2 | 1 | 21 |
| Osa03LNT0197700.2 | osa-miR2275d | Cleavage | 3.5 | 24.095 | 1 | 22 |
| Osa03LNT0197700.2 | osa-miR529a | Cleavage | 4.5 | 16.335 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0197700.2 | 3 | qHEJ-3 | Morphological trait | Shoot/Seedling | RM175 | RM22 |
| Osa03LNT0197700.2 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0197700.2 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0197700.2 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0197700.2 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Osa03LNT0197700.2 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0197700.2 | 3 | rn3 | Resistance or Tolerance | Drought tolerance | RM231 | RM175 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)