© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0197900.1
GCGAATTTTTTTTTCATAGAAAAGCATGTATTTTGCTTTGGCTATCATCATGAATTAATTGATTGTCATGAACACGAACAGTAAACAACCAGCCCAATTTACATGCTTTAGAAGGGCATTCATATTCTGCATTCGGCAAGTGAAAAATGAATCAATCAATCGCAAAGCGAAAAGGCTGACCTATACAACAGGAGATCAGGAAAACCGGTTAAACGATCAAGATGGACTCTGCCTGCTGTGCTGCTGGCTTCAGTCCACTGCACGTCGCCATAATAACTTGGCTCGGTGAGGTTACAACTTGACTTGACGCTCACCTTACACTGATTGCATCCTTGGTTCGGCTGCAAAATCTTGAATTGGCCAGGCATTCGTGTGGGTTAGCATAAAAGTAATCCTCTTCTTTTGGCTTATTTTCAAGTTTCTGCCGACAGGACGGTTGAACTACACGATTTCTATGAGTTTCCTGGACAGAAGATGCAAAATTGTTCCAAGAGATTGTCTTATTGTTGTACAGATCTATAAATCCAACCAATTTCTGTCGGTCTAGTAGCACACTTCTCCTGAAACCCAGGAACCTCCGGTGACCTTCAACAAGTTTTGCCATGTTACCATCATAAGTAGGAATGAAAATATCACTGGCTGTGGATACAATGAAGTCAAGTGCAGCCATCTGAGAAGAATGGTTCTGGAATTGTCGTAGAGCTTCCAAGTCTAGCAGCGTCTCCTTTCTTACCTGAAAGATATTCAACAAAGTTTTGGAAATGCAGCTTGTAATGGTTCTAATCTTTTTTCTCCCCCATAAATTTCACCGGCAGCAATGTATATGAGAGTGTCCTTCTGAAATCCCAGAGCTTTCAGAATAAAAGATGTCTCCTCAGGTGTAAGTGGGCATAGCCCTTGCAATCTCTTAGCTTGTGAATCAATTTCCTTTTCTCTCCACCATGGATAAGCATATCTCATTCTTTTGAGCTCTTCAGCTTCTTCTTGAGAAAGACCATGATTGCAACCAGAAAAGGCCAGCATGTCCATCTCATAGCGTAAATGCAAGGCTGCAAATGATCCCTTGGCCTGAAGTTTCATTGTTTGCTAACCGAGCATCCGTCTTGTTAAAATGGATGACGCTATATTTGCTGAATAATGGTAAGATCTGATGCAAGTAATATTTTTCATCAGACCAGCTCACAGGTGGCATATTAAGTATATTGTTTGAATCCTCTGGACCAAACCTCTTCGGAAGCTGTTTAACAATGTGCACTTCATCTCTTAATGTGTCAATGAAATGTTTAACATCAAATATATCTTCAAAATTGCTTTGATCAGCCCAGAATGACCTCTTGTCTAGTTCTGGGACAACCATTGTAAGGTTTAGCAAGCGAGCAACCGCCACCATGTCACATATCTCTGAACGCATCTGATTCAAACCCCCATTGCAAGATACCTTCAGATAACCATTACTCTTATAGACTCTTCGAGGCGGAAGCGCGGTGGGCGGAGGCGAGGGCTCCGCGTCGCCGGCGAGGCCGAACAAGGCGAGGAGGCGTCCGACGGCCACGAGCTGCCCGACGAAGGCCCACAGCAGCACGGCGCTGCACCCCGCCAGGAGCCAAACCCTAGGCCTCGACCTCGCCATCGCTCCCCCACCCTACATCCACCGCCCCCTCCTCCTCCTCCTCCTCCTGATCCCCGCCACCGGCATTGGCAGCCGCGGCAGCAGCAGCTCCTCCTCCGCCTCCTGGTTCGAGAAGGTTCCAGAAGATTCGGGAGAGGCCTAGCTGCGATTTTTTTTTTCTTTTTCCGTTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0197900.1 | 3 | 3719593 | C | T |
| Osa03LNT0197900.1 | 3 | 3717397 | C | T |
| Osa03LNT0197900.1 | 3 | 3717590 | T | G |
| Osa03LNT0197900.1 | 3 | 3718752 | T | A |
| Osa03LNT0197900.1 | 3 | 3720037 | T | C |
| Osa03LNT0197900.1 | 3 | 3720269 | T | C |
| Osa03LNT0197900.1 | 3 | 3720893 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0197900.1 | osa-miR5795 | Cleavage | 5.0 | 14.468 | 1 | 22 |
| Osa03LNT0197900.1 | osa-miR5802 | Cleavage | 4.5 | 14.419 | 1 | 24 |
| Osa03LNT0197900.1 | osa-miR396a-5p | Cleavage | 4.0 | 17.478 | 1 | 21 |
| Osa03LNT0197900.1 | osa-miR396b-5p | Cleavage | 4.0 | 17.478 | 1 | 21 |
| Osa03LNT0197900.1 | osa-miR396c-5p | Cleavage | 4.0 | 17.478 | 1 | 21 |
| Osa03LNT0197900.1 | osa-miR167h-3p | Translation | 4.5 | 19.189 | 1 | 21 |
| Osa03LNT0197900.1 | osa-miR529b | Cleavage | 4.5 | 19.7 | 1 | 21 |
| Osa03LNT0197900.1 | osa-miR2105 | Cleavage | 3.5 | 14.241 | 1 | 20 |
| Osa03LNT0197900.1 | osa-miR2874 | Translation | 5.0 | 14.362 | 1 | 24 |
| Osa03LNT0197900.1 | osa-miR5515 | Cleavage | 5.0 | 20.798 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0197900.1 | 3 | rn3 | Resistance or Tolerance | Drought tolerance | RM231 | RM175 |
| Osa03LNT0197900.1 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Osa03LNT0197900.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0197900.1 | 3 | qHEJ-3 | Morphological trait | Shoot/Seedling | RM175 | RM22 |
| Osa03LNT0197900.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0197900.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0197900.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)